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Search term: YMR283C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RIT1
SGD link S000004896
Alternative ID YMR283C
Description 2'-O-ribosyl phosphate transferase, modifies the initiator methionine tRNA at position 64 to distinguish it from elongator methionine tRNA
Synonyms YMR283C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2634 A---YP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Initiator tRNA phosphoribosyl-transferase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g40570 GI:15226713
Saccharomyces cerevisiae (Sce) YMR283c
(S000004896)		 GI:6323939 P23796
Schizosaccharomyces pombe (Spo) SPAC3F10.06c GI:19114850 Q10181


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt2g40570
GO:0005634 nucleus C
IDA
SpoSPAC3F10.06c
GO:0005737 cytoplasm C
IDA
SceS000004896
ISS
SpoSPAC3F10.06c
GO:0005829 cytosol C
IDA
SpoSPAC3F10.06c
GO:0016763 transferase activity, transferring pentosyl
groups		 F
IDA
SceS000004896
IGI
SceS000004896
IMP
SceS000004896
ISS
AthAt2g40570
GO:0043399 tRNA A64-2'-O-ribosylphosphate transferase
activity		 F
ISS
SpoSPAC3F10.06c
GO:0006417 regulation of translation P
ISS
AthAt2g40570
GO:0019988 charged-tRNA amino acid modification P
IGI
SceS000004896
IMP
SceS000004896
ISS
SpoSPAC3F10.06c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6694

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC3F10.06c GI:19114850 Q10181
Saccharomyces cerevisiae (Sce) RIT1
(S000004896)		 GI:6323939 P23796
Kluyveromyces lactis (Kla) KLLA0D01386g GI:50306313
Magnaporthe grisea (Mgr) MGG_08167 GI:39946094
Neurospora crassa (Ncr) NCU03730.1 GI:32404838
Arabidopsis thaliana (Ath) AT2G40570 GI:42569807
Oryza sativa (Osa) Os06g0555500 GI:115468506


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt2g40570
GO:0005634 nucleus C
IDA
SpoSPAC3F10.06c
GO:0005737 cytoplasm C
IDA
SceS000004896
ISS
SpoSPAC3F10.06c
GO:0005829 cytosol C
IDA
SpoSPAC3F10.06c
GO:0016763 transferase activity, transferring pentosyl
groups		 F
IDA
SceS000004896
IGI
SceS000004896
IMP
SceS000004896
ISS
AthAt2g40570
GO:0043399 tRNA A64-2'-O-ribosylphosphate transferase
activity		 F
ISS
SpoSPAC3F10.06c
GO:0006417 regulation of translation P
ISS
AthAt2g40570
GO:0019988 charged-tRNA amino acid modification P
IGI
SceS000004896
IMP
SceS000004896
ISS
SpoSPAC3F10.06c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_7854

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3643 AFR451C
Arabidopsis thaliana (Ath) ath11197 At2g40570.1
Dictyostelium discoideum (Ddi) ddi7187 DDB0187104
Debaryomyces hansenii (Dha) dha4650 DEHA0F05896g
Kluyveromyces lactis (Kla) kla2129 KLLA0D01386g
Neurospora crassa (Ncr) ncr3620 NCU03730.2
Oryza sativa (Osa) osa4282 1988.m00121
Oryza sativa (Osa) osa37647 4871.m00150
Saccharomyces cerevisiae (Sce) sce5057 YMR283C
(S000004896)
Schizosaccharomyces pombe (Spo) spo432 SPAC3F10.06c Q10181
Yarrowia lipolytica (Yli) yli4770 YALI0E22000g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt2g40570
GO:0005634 nucleus C
IDA
SpoSPAC3F10.06c
GO:0005737 cytoplasm C
IDA
SceS000004896
ISS
SpoSPAC3F10.06c
GO:0005829 cytosol C
IDA
SpoSPAC3F10.06c
GO:0016763 transferase activity, transferring pentosyl
groups		 F
IDA
SceS000004896
IGI
SceS000004896
IMP
SceS000004896
ISS
AthAt2g40570
GO:0043399 tRNA A64-2'-O-ribosylphosphate transferase
activity		 F
ISS
SpoSPAC3F10.06c
GO:0006417 regulation of translation P
ISS
AthAt2g40570
GO:0019988 charged-tRNA amino acid modification P
IGI
SceS000004896
IMP
SceS000004896
ISS
SpoSPAC3F10.06c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC3F10.06c
(Q10181)		 YMR283C
(S000004896)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC3F10.06c
GO:0005737 cytoplasm C
IDA
SceS000004896
ISS
SpoSPAC3F10.06c
GO:0005829 cytosol C
IDA
SpoSPAC3F10.06c
GO:0016763 transferase activity, transferring pentosyl
groups		 F
IDA
SceS000004896
IGI
SceS000004896
IMP
SceS000004896
GO:0043399 tRNA A64-2'-O-ribosylphosphate transferase
activity		 F
ISS
SpoSPAC3F10.06c
GO:0019988 charged-tRNA amino acid modification P
IGI
SceS000004896
IMP
SceS000004896
ISS
SpoSPAC3F10.06c

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