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Search term: YMR304W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UBP15
SGD link S000004920
Alternative ID YMR304W
Description Ubiquitin-specific protease that may play a role in ubiquitin precursor processing
Synonyms YMR304W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1863 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Ubiquitin carboxyl-terminal hydrolase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g11910 GI:15229894
Arabidopsis thaliana (Ath) At3g49600_2 GI:11358453
Arabidopsis thaliana (Ath) At5g06600 GI:13430572
Caenorhabditis elegans (Cel) CE01599 GI:17534845
Caenorhabditis elegans (Cel) CE09811 GI:17507015
Caenorhabditis elegans (Cel) CE16182
(WBGene00010406)		 GI:17561912 O45623
Caenorhabditis elegans (Cel) CE16183 GI:17561910 O45623
Caenorhabditis elegans (Cel) CE18034_1 GI:17541290
Caenorhabditis elegans (Cel) CE28715 GI:17537601
Drosophila melanogaster (Dme) 7292738 GI:7292738
Homo sapiens (Hsa) Hs14776897 GI:14776897
Homo sapiens (Hsa) Hs14777500 GI:14777500
Homo sapiens (Hsa) Hs16507200
(USP28)		 GI:16507200 Q96RU2
Homo sapiens (Hsa) Hs18860907_1 GI:18860907
Homo sapiens (Hsa) Hs19923413 GI:19923413
Homo sapiens (Hsa) Hs22052508 GI:22052508
Homo sapiens (Hsa) Hs22052513 GI:22052513
Homo sapiens (Hsa) Hs4507857 GI:4507857
Homo sapiens (Hsa) Hs8394519 GI:8394519
Saccharomyces cerevisiae (Sce) YMR304w
(S000004920)		 GI:6323962 P50101
Saccharomyces cerevisiae (Sce) YOR124c
(S000005650)		 GI:6324698 Q01476
Schizosaccharomyces pombe (Spo) SPAC328.06 GI:19115120 Q9P3U0
Schizosaccharomyces pombe (Spo) SPBC713.02c GI:19112133 Q9UTT1
Schizosaccharomyces pombe (Spo) SPCC188.08c GI:19075711 Q09879
Encephalitozoon cuniculi (Ecu) ECU03g0580 GI:19173018 Q8SSA9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g06600
At3g11910
GO:0005634 nucleus C
IDA
SpoSPBC713.02c
SPCC188.08c
GO:0005654 nucleoplasm C
IDA
HsaUSP28
GO:0005730 nucleolus C
IDA
AthAt3g49600
GO:0005737 cytoplasm C
IC
SceS000005650
S000004920
GO:0005829 cytosol C
IDA
SpoSPAC328.06
SPCC188.08c
SPBC713.02c
GO:0004221 ubiquitin thiolesterase activity F
IMP
HsaUSP28
ISS
SpoSPBC713.02c
GO:0004843 ubiquitin-specific protease activity F
IDA
HsaUSP28
SceS000005650
ISS
AthAt3g49600
At5g06600
At3g11910
SpoSPAC328.06
TAS
SceS000004920
GO:0005515 protein binding F
IPI
HsaUSP28
GO:0000003 reproduction P
IMP
CelWBGene00010406
GO:0000077 DNA damage checkpoint P
IMP
HsaUSP28
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
ISS
SpoSPBC713.02c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000004920
GO:0008283 cell proliferation P
IMP
HsaUSP28
GO:0010212 response to ionizing radiation P
IDA
HsaUSP28
GO:0016579 protein deubiquitination P
IDA
HsaUSP28
SceS000005650
ISS
SpoSPAC328.06
TAS
SceS000004920
GO:0033554 cellular response to stress P
IEP
SpoSPBC713.02c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00010406
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00010406
GO:0042771 DNA damage response, signal transduction by p53
class mediator resulting in induction of
apoptosis		 P
IDA
HsaUSP28
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IGI
SceS000005650
IMP
SceS000005650
IPI
SceS000005650
GO:0045859 regulation of protein kinase activity P
IGI
SpoSPBC713.02c
GO:0048316 seed development P
IMP
AthAt3g49600
GO:0051049 regulation of transport P
RCA
SceS000005650

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2592

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) USP7 GI:150378533
Pan troglodytes (Ptr) USP7 GI:114660934
Canis familiaris (Cfa) USP7 GI:73958957
Mus musculus (Mmu) Usp7
(MGI:2182061)		 GI:51491860 Q3THF6
Rattus norvegicus (Rno) Usp7
(RGD:1306915)		 GI:67078438
Gallus gallus (Gga) USP7 GI:45383223
Drosophila melanogaster (Dme) Usp7 GI:24641480
Anopheles gambiae (Aga) AgaP_AGAP008530 GI:158296520
Caenorhabditis elegans (Cel) math-33
(CE16182;
WBGene00010406)		 GI:17561912 O45623
Schizosaccharomyces pombe (Spo) ubp15 GI:19112133
Schizosaccharomyces pombe (Spo) ubp22
(SPCC188.08c)		 GI:19075711 Q09879
Saccharomyces cerevisiae (Sce) UBP15
(S000004920)		 GI:6323962 P50101
Kluyveromyces lactis (Kla) KLLA0C13981g GI:50305729
Eremothecium gossypii (Ego) AGOS_AGL357W GI:45200740
Magnaporthe grisea (Mgr) MGG_07468 GI:39972333
Neurospora crassa (Ncr) NCU03797.1 GI:32404970
Arabidopsis thaliana (Ath) UBP12 GI:30681531
Arabidopsis thaliana (Ath) UBP13 GI:30681938
Oryza sativa (Osa) Os07g0163800 GI:115470711


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthUBP13
UBP12
GO:0005634 nucleus C
IDA
HsaUSP7
MmuMGI:2182061
SpoSPCC188.08c
GO:0005737 cytoplasm C
IC
SceS000004920
IDA
MmuMGI:2182061
GO:0005829 cytosol C
IDA
SpoSPCC188.08c
GO:0002039 p53 binding F
IDA
HsaUSP7
GO:0004197 cysteine-type endopeptidase activity F
TAS
HsaUSP7
GO:0004221 ubiquitin thiolesterase activity F
IMP
HsaUSP7
GO:0004843 ubiquitin-specific protease activity F
IDA
HsaUSP7
IMP
HsaUSP7
ISO
MmuMGI:2182061
ISS
AthUBP12
UBP13
TAS
SceS000004920
GO:0005515 protein binding F
IPI
HsaUSP7
GO:0008022 protein C-terminus binding F
IPI
HsaUSP7
GO:0008134 transcription factor binding F
IPI
HsaUSP7
GO:0031625 ubiquitin protein ligase binding F
IPI
HsaUSP7
GO:0042803 protein homodimerization activity F
ISO
MmuMGI:2182061
GO:0000003 reproduction P
IMP
CelWBGene00010406
GO:0006917 induction of apoptosis P
ISO
MmuMGI:2182061
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000004920
GO:0016579 protein deubiquitination P
IDA
HsaUSP7
IMP
HsaUSP7
ISO
MmuMGI:2182061
TAS
SceS000004920
GO:0031647 regulation of protein stability P
ISO
MmuMGI:2182061
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00010406
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00010406
GO:0051090 regulation of transcription factor
activity		 P
IDA
HsaUSP7

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1124

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10534 ENSANGP00000006552
Ashbya gossypii (Ago) ago3955 AGL357W
Arabidopsis thaliana (Ath) ath13317 At3g11910.1
Arabidopsis thaliana (Ath) ath22861 At5g06600.1
Arabidopsis thaliana (Ath) ath22862 At5g06600.2
Caenorhabditis elegans (Cel) cel11366 H19N07.2a
(CE16182;
WBGene00010406)
Caenorhabditis elegans (Cel) cel11367 H19N07.2b
(CE16183)
Caenorhabditis elegans (Cel) cel11368 H19N07.2c
(CE36180)
Candida glabrata (Cgl) cgl5257 CAGL0M13783g
Dictyostelium discoideum (Ddi) ddi1664 DDB0167082
Debaryomyces hansenii (Dha) dha2043 DEHA0C13893g
Drosophila melanogaster (Dme) dme17544 CG1490-PB
(FBgn0030366)
Danio rerio (Dre) dre17362 ENSDARP00000002502
(LOC553758)		 Q52KL0
Encephalitozoon cuniculi (Ecu) ecu425 19173018
Takifugu rubripes (Fru) fru2521 SINFRUP00000143602
Gallus gallus (Gga) gga6756 ENSGALP00000011813
(USP7)
Homo sapiens (Hsa) hsa11636 ENSP00000343535
(USP7)		 Q93009
Kluyveromyces lactis (Kla) kla1823 KLLA0C13970g
Kluyveromyces lactis (Kla) kla1824 KLLA0C13981g
Mus musculus (Mmu) mmu9866 ENSMUSP00000047342
Mus musculus (Mmu) mmu9867 ENSMUSP00000076287
Neurospora crassa (Ncr) ncr3687 NCU03797.2
Oryza sativa (Osa) osa4001 2082.m00079
Oryza sativa (Osa) osa10094 2718.m00146
Oryza sativa (Osa) osa32027 4398.m00107
Oryza sativa (Osa) osa56455 6191.m00120
Oryza sativa (Osa) osa74897 7344.m00115
Oryza sativa (Osa) osa79127 7400.m00112
Plasmodium falciparum (Pfa) pfa2507 MAL7P1.147
Rattus norvegicus (Rno) rno4430 ENSRNOP00000037260
(RGD:1311509)
Rattus norvegicus (Rno) rno4431 ENSRNOP00000041134
(RGD:1306915)		 Q4VSI4
Rattus norvegicus (Rno) rno4429 ENSRNOP00000044820
Saccharomyces cerevisiae (Sce) sce5081 YMR304W
(S000004920)
Schizosaccharomyces pombe (Spo) spo3883 SPBC713.02c Q9UTT1
Schizosaccharomyces pombe (Spo) spo2001 SPCC188.08c Q09879
Yarrowia lipolytica (Yli) yli3383 YALI0D16335g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g06600
At3g11910
GO:0005634 nucleus C
IDA
SpoSPBC713.02c
SPCC188.08c
ISS
DmeFBgn0030366
GO:0005737 cytoplasm C
IC
SceS000004920
GO:0005829 cytosol C
IDA
SpoSPCC188.08c
SPBC713.02c
GO:0004221 ubiquitin thiolesterase activity F
ISS
SpoSPBC713.02c
GO:0004843 ubiquitin-specific protease activity F
ISS
AthAt5g06600
At3g11910
DmeFBgn0030366
TAS
SceS000004920
GO:0000003 reproduction P
IMP
CelWBGene00010406
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
ISS
SpoSPBC713.02c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000004920
GO:0016579 protein deubiquitination P
ISS
DmeFBgn0030366
PfaMAL7P1.147
TAS
SceS000004920
GO:0033554 cellular response to stress P
IEP
SpoSPBC713.02c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00010406
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00010406
GO:0045859 regulation of protein kinase activity P
IGI
SpoSPBC713.02c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC188.08c
(Q09879)		 YMR304W
(S000004920)
SPBC713.02c
(Q9UTT1)		 YMR304W
(S000004920)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC713.02c
SPCC188.08c
GO:0005737 cytoplasm C
IC
SceS000004920
GO:0005829 cytosol C
IDA
SpoSPCC188.08c
SPBC713.02c
GO:0004221 ubiquitin thiolesterase activity F
ISS
SpoSPBC713.02c
GO:0004843 ubiquitin-specific protease activity F
TAS
SceS000004920
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
ISS
SpoSPBC713.02c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000004920
GO:0016579 protein deubiquitination P
TAS
SceS000004920
GO:0033554 cellular response to stress P
IEP
SpoSPBC713.02c
GO:0045859 regulation of protein kinase activity P
IGI
SpoSPBC713.02c

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