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Search term: YNL039W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BDP1
SGD link S000004984
Alternative ID YNL039W
Description Essential subunit of RNA polymerase III transcription factor (TFIIIB), which is involved in transcription of genes encoding tRNAs, 5S rRNA, U6 snRNA, and other small RNAs
Synonyms YNL039W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2009 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor TFIIIB, Bdp1 subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g39160 GI:15234963
Caenorhabditis elegans (Cel) CE29531
(WBGene00015091)		 GI:17505318 O01441
Drosophila melanogaster (Dme) 7298050 GI:20129501
Homo sapiens (Hsa) Hs21281669 GI:9886705 Q9H197
Saccharomyces cerevisiae (Sce) YNL039w
(S000004984)		 GI:6324289 P46678
Schizosaccharomyces pombe (Spo) SPCC1919.14c GI:19075996 O94481
Encephalitozoon cuniculi (Ecu) ECU03g1040 GI:19173062 Q8SW26


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000126 transcription factor TFIIIB complex C
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0005634 nucleus C
IDA
SpoSPCC1919.14c
GO:0003677 DNA binding F
ISS
AthAt4g39160
SpoSPCC1919.14c
GO:0003700 transcription factor activity F
ISS
AthAt4g39160
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SceS000004984
GO:0000003 reproduction P
IMP
CelWBGene00015091
GO:0002119 nematode larval development P
IMP
CelWBGene00015091
GO:0006383 transcription from RNA polymerase III
promoter		 P
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015091
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015091
GO:0040007 growth P
IMP
CelWBGene00015091
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015091
GO:0070896 positive regulation of transposon
integration		 P
IDA
SceS000004984
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000004984
IMP
SceS000004984

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40141

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) bdp1
(SPCC1919.14c)		 GI:19075996 O94481
Saccharomyces cerevisiae (Sce) BDP1
(S000004984)		 GI:6324289 P46678
Kluyveromyces lactis (Kla) KLLA0E08437g GI:50308657
Eremothecium gossypii (Ego) AGOS_ADL219C GI:45187654


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000126 transcription factor TFIIIB complex C
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0005634 nucleus C
IDA
SpoSPCC1919.14c
GO:0003677 DNA binding F
ISS
SpoSPCC1919.14c
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SceS000004984
GO:0006383 transcription from RNA polymerase III
promoter		 P
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0070896 positive regulation of transposon
integration		 P
IDA
SceS000004984
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000004984
IMP
SceS000004984

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2627

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1522 ADL219C
Arabidopsis thaliana (Ath) ath22118 At4g39160.1
Caenorhabditis elegans (Cel) cel250 B0261.1
(CE29531;
WBGene00015091)
Candida glabrata (Cgl) cgl1691 CAGL0G01584g
Cryptococcus neoformans (Cne) cne2085 181.m08072
Dictyostelium discoideum (Ddi) ddi12491 DDB0220508
Debaryomyces hansenii (Dha) dha2238 DEHA0C18238g
Drosophila melanogaster (Dme) dme2266 CG9305-PA
(FBgn0032512)
Danio rerio (Dre) dre25669 ENSDARP00000044671
Encephalitozoon cuniculi (Ecu) ecu469 19173062
Takifugu rubripes (Fru) fru6512 SINFRUP00000131207
Gallus gallus (Gga) gga28189 ENSGALP00000003837
(BDP1)
Gallus gallus (Gga) gga28190 ENSGALP00000003941
(LOC427394)
Homo sapiens (Hsa) hsa25363 ENSP00000315834
Homo sapiens (Hsa) hsa25362 ENSP00000351575
(BDP1)		 A6H8Y1-1
Kluyveromyces lactis (Kla) kla3330 KLLA0E08437g
Mus musculus (Mmu) mmu7452 ENSMUSP00000036920
Neurospora crassa (Ncr) ncr7344 NCU07543.2
Oryza sativa (Osa) osa26597 4127.m00178
Oryza sativa (Osa) osa87309 9229.m00141
Oryza sativa (Osa) osa87161 9545.m00122
Rattus norvegicus (Rno) rno15423 ENSRNOP00000024023
(RGD:1308512)
Rattus norvegicus (Rno) rno15426 ENSRNOP00000024109
Rattus norvegicus (Rno) rno15425 ENSRNOP00000039184
Rattus norvegicus (Rno) rno15427 ENSRNOP00000041350
Saccharomyces cerevisiae (Sce) sce5148 YNL039W
(S000004984)
Schizosaccharomyces pombe (Spo) spo4415 SPCC1919.14c O94481
Yarrowia lipolytica (Yli) yli4661 YALI0E19382g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000126 transcription factor TFIIIB complex C
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0005634 nucleus C
IDA
SpoSPCC1919.14c
ISS
DmeFBgn0032512
GO:0003677 DNA binding F
ISS
AthAt4g39160
SpoSPCC1919.14c
GO:0003700 transcription factor activity F
ISS
AthAt4g39160
DmeFBgn0032512
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SceS000004984
GO:0000003 reproduction P
IMP
CelWBGene00015091
GO:0002119 nematode larval development P
IMP
CelWBGene00015091
GO:0006383 transcription from RNA polymerase III
promoter		 P
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015091
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015091
GO:0040007 growth P
IMP
CelWBGene00015091
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015091
GO:0070896 positive regulation of transposon
integration		 P
IDA
SceS000004984
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000004984
IMP
SceS000004984

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC1919.14c
(O94481)		 YNL039W
(S000004984)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000126 transcription factor TFIIIB complex C
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0005634 nucleus C
IDA
SpoSPCC1919.14c
GO:0003677 DNA binding F
ISS
SpoSPCC1919.14c
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SceS000004984
GO:0006383 transcription from RNA polymerase III
promoter		 P
IDA
SceS000004984
ISS
SpoSPCC1919.14c
GO:0070896 positive regulation of transposon
integration		 P
IDA
SceS000004984
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000004984
IMP
SceS000004984

Back to the top
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Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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