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Search term: YNL049C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SFB2
SGD link S000004994
Alternative ID YNL049C
Description Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, required for cargo selection during vesicle formation in ER to Golgi transport; homologous to Sec24p and Sfb3p
Synonyms YNL049C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1985 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Vesicle coat complex COPII, subunit SEC24/subunit SFB2

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g27460 GI:18401431
Arabidopsis thaliana (Ath) At3g07100 GI:15231385
Caenorhabditis elegans (Cel) CE24707 GI:17544522
Drosophila melanogaster (Dme) 7303833
(sec24)		 GI:20129835 A1Z813
Homo sapiens (Hsa) Hs5454046 GI:5454046
Homo sapiens (Hsa) Hs22049400 GI:22049400
Saccharomyces cerevisiae (Sce) YIL109c
(S000001371)		 GI:6322082 P40482
Saccharomyces cerevisiae (Sce) YNL049c
(S000004994)		 GI:6324279 P53953
Schizosaccharomyces pombe (Spo) SPAC22F8.08 GI:19115643 Q9UUI5
Encephalitozoon cuniculi (Ecu) ECU02g1230 GI:19074042 Q8SWA5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC22F8.08
GO:0030127 COPII vesicle coat C
IDA
SceS000001371
IPI
SceS000004994
ISS
SpoSPAC22F8.08
GO:0030134 ER to Golgi transport vesicle C
ISS
Dmesec24
GO:0070971 endoplasmic reticulum exit site C
IDA
SpoSPAC22F8.08
GO:0005048 signal sequence binding F
IMP
SceS000001371
ISS
SceS000004994
GO:0005215 transporter activity F
ISS
AthAt3g07100
At2g27460
GO:0006810 transport P
ISS
AthAt3g07100
GO:0006886 intracellular protein transport P
IC
SpoSPAC22F8.08
GO:0006888 ER to Golgi vesicle-mediated transport P
ISS
Dmesec24
GO:0006914 autophagy P
ISS
SpoSPAC22F8.08
GO:0016192 vesicle-mediated transport P
ISS
AthAt2g27460
GO:0080119 ER body organization P
IMP
AthAt3g07100
GO:0090110 cargo loading into COPII-coated
vesicle		 P
IDA
SceS000001371
S000004994
IGI
SceS000004994
ISS
SpoSPAC22F8.08

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1351

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga664 ENSANGP00000015751
Ashbya gossypii (Ago) ago1502 ADL239C
Arabidopsis thaliana (Ath) ath12795 At3g07100.1
Caenorhabditis elegans (Cel) cel21436 ZC518.2
(CE32286;
WBGene00004756)
Candida glabrata (Cgl) cgl473 CAGL0C01353g
Candida glabrata (Cgl) cgl706 CAGL0D01078g
Cryptococcus neoformans (Cne) cne4595 186.m03435
Cryptococcus neoformans (Cne) cne4596 186.m03436
Dictyostelium discoideum (Ddi) ddi5963 DDB0204114
Debaryomyces hansenii (Dha) dha2454 DEHA0D03542g
Drosophila melanogaster (Dme) dme4175 CG1472-PA
(FBgn0033460)
Encephalitozoon cuniculi (Ecu) ecu121 19074042
Takifugu rubripes (Fru) fru24669 SINFRUP00000142048
Takifugu rubripes (Fru) fru23916 SINFRUP00000142220
Takifugu rubripes (Fru) fru23915 SINFRUP00000142221
Gallus gallus (Gga) gga6016 ENSGALP00000010342
(SEC24A)
Gallus gallus (Gga) gga17482 ENSGALP00000016935
(RCJMB04_2p15)		 Q5ZM67
Gallus gallus (Gga) gga17483 ENSGALP00000016936
Homo sapiens (Hsa) hsa24519 ENSP00000265175
(SEC24B)		 O95487-1
Homo sapiens (Hsa) hsa25739 ENSP00000265341
Kluyveromyces lactis (Kla) kla4249 KLLA0F03729g
Mus musculus (Mmu) mmu17556 ENSMUSP00000001079
(MGI:2139764)		 Q80ZX0
Mus musculus (Mmu) mmu3608 ENSMUSP00000044370
(MGI:1924621)		 A2AA71
Neurospora crassa (Ncr) ncr2324 NCU02391.2
Oryza sativa (Osa) osa82692 8193.m00171
Plasmodium falciparum (Pfa) pfa3838 PF13_0324
Rattus norvegicus (Rno) rno4939 ENSRNOP00000006356
(RGD:1309451)
Rattus norvegicus (Rno) rno17018 ENSRNOP00000037163
(RGD:1309358)
Saccharomyces cerevisiae (Sce) sce3130 YIL109C
(S000001371)
Saccharomyces cerevisiae (Sce) sce5159 YNL049C
(S000004994)
Schizosaccharomyces pombe (Spo) spo4860 SPAC22F8.08 Q9UUI5
Yarrowia lipolytica (Yli) yli5564 YALI0F05324g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2139764
MGI:1924621
GO:0005829 cytosol C
IDA
SpoSPAC22F8.08
GO:0030127 COPII vesicle coat C
IDA
SceS000001371
IPI
SceS000004994
ISS
SpoSPAC22F8.08
GO:0030134 ER to Golgi transport vesicle C
ISS
DmeFBgn0033460
GO:0070971 endoplasmic reticulum exit site C
IDA
SpoSPAC22F8.08
GO:0003674 molecular_function F
ND
MmuMGI:1924621
MGI:2139764
GO:0005048 signal sequence binding F
IMP
SceS000001371
ISS
SceS000004994
GO:0005215 transporter activity F
ISS
AthAt3g07100
GO:0008565 protein transporter activity F
ISS
PfaPF13_0324
GO:0002119 nematode larval development P
IMP
CelWBGene00004756
GO:0006810 transport P
ISS
AthAt3g07100
GO:0006886 intracellular protein transport P
IC
SpoSPAC22F8.08
GO:0006888 ER to Golgi vesicle-mediated transport P
ISS
DmeFBgn0033460
GO:0006914 autophagy P
ISS
SpoSPAC22F8.08
GO:0008150 biological_process P
ND
MmuMGI:1924621
MGI:2139764
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004756
GO:0010171 body morphogenesis P
IMP
CelWBGene00004756
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004756
GO:0040011 locomotion P
IMP
CelWBGene00004756
GO:0080119 ER body organization P
IMP
AthAt3g07100
GO:0090110 cargo loading into COPII-coated
vesicle		 P
IDA
SceS000001371
S000004994
IGI
SceS000004994
ISS
SpoSPAC22F8.08

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC22F8.08
(Q9UUI5)		 YNL049C
(S000004994)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC22F8.08
GO:0030127 COPII vesicle coat C
IPI
SceS000004994
ISS
SpoSPAC22F8.08
GO:0070971 endoplasmic reticulum exit site C
IDA
SpoSPAC22F8.08
GO:0005048 signal sequence binding F
ISS
SceS000004994
GO:0006886 intracellular protein transport P
IC
SpoSPAC22F8.08
GO:0006914 autophagy P
ISS
SpoSPAC22F8.08
GO:0090110 cargo loading into COPII-coated
vesicle		 P
IDA
SceS000004994
IGI
SceS000004994
ISS
SpoSPAC22F8.08

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GO info in one table:

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