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Search term: YNL052W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name COX5A
SGD link S000004997
Alternative ID YNL052W
Description Subunit Va of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain; predominantly expressed during aerobic growth while its isoform Vb (Cox5Bp) is expressed during anaerobic growth
Synonyms YNL052W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4075 -CDHYP-

KOGs classification KOGs description
METABOLISM Cytochrome c oxidase, subunit IV/COX5b

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE20171
(WBGene00012354)		 GI:17509657 Q9U329
Drosophila melanogaster (Dme) 7298641 GI:19921566 Q9VIQ8
Drosophila melanogaster (Dme) 7302241 GI:7302241
Homo sapiens (Hsa) Hs4502981
(COX4I1)		 GI:4502981 P13073
Homo sapiens (Hsa) Hs17476954 GI:17476954
Homo sapiens (Hsa) Hs17999526
(COX4I2)		 GI:17999526 Q96KJ9
Saccharomyces cerevisiae (Sce) YIL111w
(S000001373)		 GI:6322080 P00425
Saccharomyces cerevisiae (Sce) YNL052w
(S000004997)		 GI:6324276 P00424
Schizosaccharomyces pombe (Spo) SPCC338.10c GI:19075658 O74988


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaCOX4I1
GO:0005739 mitochondrion C
IDA
HsaCOX4I1
SceS000001373
S000004997
SpoSPCC338.10c
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IC
HsaCOX4I2
IDA
SceS000001373
IPI
SceS000004997
ISS
SpoSPCC338.10c
GO:0004129 cytochrome-c oxidase activity F
IDA
HsaCOX4I2
IMP
SceS000004997
IPI
SceS000001373
ISS
SpoSPCC338.10c
GO:0005515 protein binding F
IPI
HsaCOX4I1
GO:0050421 nitrite reductase (NO-forming)
activity		 F
IMP
SceS000001373
GO:0000003 reproduction P
IMP
CelWBGene00012354
GO:0002119 nematode larval development P
IMP
CelWBGene00012354
GO:0006091 generation of precursor metabolites and
energy		 P
NAS
HsaCOX4I2
TAS
HsaCOX4I1
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IC
SpoSPCC338.10c
IDA
SceS000004997
S000001373
GO:0006414 translational elongation P
RCA
SceS000004997
GO:0006811 ion transport P
RCA
SceS000004997
GO:0008219 cell death P
RCA
SceS000004997
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00012354
GO:0009117 nucleotide metabolic process P
RCA
SceS000004997
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012354
GO:0015992 proton transport P
ISS
SpoSPCC338.10c
GO:0034220 ion transmembrane transport P
ISS
SpoSPCC338.10c
GO:0040007 growth P
IMP
CelWBGene00012354
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012354
GO:0045333 cellular respiration P
NAS
HsaCOX4I2
GO:0055114 oxidation reduction P
NAS
HsaCOX4I2
RCA
SceS000004997
S000001373

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
21905

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) cox5
(SPCC338.10c)		 GI:19075658 O74988
Saccharomyces cerevisiae (Sce) COX5A
(S000004997)		 GI:6324276 P00424
Kluyveromyces lactis (Kla) KLLA0F03641g GI:50310451
Eremothecium gossypii (Ego) AGOS_ADL243W GI:45187630
Magnaporthe grisea (Mgr) MGG_03188 GI:39942216
Neurospora crassa (Ncr) NCU05457.1 GI:32409663


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004997
SpoSPCC338.10c
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IPI
SceS000004997
ISS
SpoSPCC338.10c
GO:0004129 cytochrome-c oxidase activity F
IMP
SceS000004997
ISS
SpoSPCC338.10c
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IC
SpoSPCC338.10c
IDA
SceS000004997
GO:0006414 translational elongation P
RCA
SceS000004997
GO:0006811 ion transport P
RCA
SceS000004997
GO:0008219 cell death P
RCA
SceS000004997
GO:0009117 nucleotide metabolic process P
RCA
SceS000004997
GO:0015992 proton transport P
ISS
SpoSPCC338.10c
GO:0034220 ion transmembrane transport P
ISS
SpoSPCC338.10c
GO:0055114 oxidation reduction P
RCA
SceS000004997

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13289

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1498 ADL243W
Cryptococcus neoformans (Cne) cne3752 176.m02561
Debaryomyces hansenii (Dha) dha2463 DEHA0D03740g
Kluyveromyces lactis (Kla) kla4245 KLLA0F03641g
Neurospora crassa (Ncr) ncr5300 NCU05457.2
Saccharomyces cerevisiae (Sce) sce3132 YIL111W
(S000001373)
Saccharomyces cerevisiae (Sce) sce5162 YNL052W
(S000004997)
Schizosaccharomyces pombe (Spo) spo1647 SPCC338.10c O74988
Yarrowia lipolytica (Yli) yli5489 YALI0F03567g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000001373
S000004997
SpoSPCC338.10c
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IDA
SceS000001373
IPI
SceS000004997
ISS
SpoSPCC338.10c
GO:0004129 cytochrome-c oxidase activity F
IMP
SceS000004997
IPI
SceS000001373
ISS
SpoSPCC338.10c
GO:0050421 nitrite reductase (NO-forming)
activity		 F
IMP
SceS000001373
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IC
SpoSPCC338.10c
IDA
SceS000004997
S000001373
GO:0006414 translational elongation P
RCA
SceS000004997
GO:0006811 ion transport P
RCA
SceS000004997
GO:0008219 cell death P
RCA
SceS000004997
GO:0009117 nucleotide metabolic process P
RCA
SceS000004997
GO:0015992 proton transport P
ISS
SpoSPCC338.10c
GO:0034220 ion transmembrane transport P
ISS
SpoSPCC338.10c
GO:0055114 oxidation reduction P
RCA
SceS000004997
S000001373

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC338.10c
(O74988)		 YNL052W
(S000004997)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000004997
SpoSPCC338.10c
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IPI
SceS000004997
ISS
SpoSPCC338.10c
GO:0004129 cytochrome-c oxidase activity F
IMP
SceS000004997
ISS
SpoSPCC338.10c
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IC
SpoSPCC338.10c
IDA
SceS000004997
GO:0006414 translational elongation P
RCA
SceS000004997
GO:0006811 ion transport P
RCA
SceS000004997
GO:0008219 cell death P
RCA
SceS000004997
GO:0009117 nucleotide metabolic process P
RCA
SceS000004997
GO:0015992 proton transport P
ISS
SpoSPCC338.10c
GO:0034220 ion transmembrane transport P
ISS
SpoSPCC338.10c
GO:0055114 oxidation reduction P
RCA
SceS000004997

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GO info in one table:

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