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Search term: YNL079C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TPM1
SGD link S000005023
Alternative ID YNL079C
Description Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; acetylated by the NatB complex and acetylated form binds actin most efficiently
Synonyms YNL079C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1003 -CDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Actin filament-coating protein tropomyosin

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE28782
(WBGene00002978)		 GI:17510803
Caenorhabditis elegans (Cel) CE29058 GI:17510809
Caenorhabditis elegans (Cel) CE29059 GI:17510805
Caenorhabditis elegans (Cel) CE29060 GI:17510807
Drosophila melanogaster (Dme) 7299991 GI:7299991
Drosophila melanogaster (Dme) 7299992 GI:7299992
Drosophila melanogaster (Dme) 7299993 GI:17737977
Homo sapiens (Hsa) Hs14729747 GI:14729747
Homo sapiens (Hsa) Hs17462853 GI:17462853
Homo sapiens (Hsa) Hs17482462 GI:17482462
Homo sapiens (Hsa) Hs17490014 GI:17490014
Homo sapiens (Hsa) Hs18553161 GI:18553161
Homo sapiens (Hsa) Hs18585091 GI:18585091
Homo sapiens (Hsa) Hs18590249 GI:18590249
Homo sapiens (Hsa) Hs20070123 GI:20070123
Homo sapiens (Hsa) Hs20539050 GI:20539050
Homo sapiens (Hsa) Hs20539300 GI:20539300
Homo sapiens (Hsa) Hs20539590 GI:20539590
Homo sapiens (Hsa) Hs20545089 GI:20545089
Homo sapiens (Hsa) Hs4507649 GI:4507649
Homo sapiens (Hsa) Hs4507651 GI:4507651 Q9UCS3
Saccharomyces cerevisiae (Sce) YIL138c
(S000001400)		 GI:6322053 P40414
Saccharomyces cerevisiae (Sce) YNL079c
(S000005023)		 GI:6324250 P17536
Schizosaccharomyces pombe (Spo) SPAC27F1.02c GI:19115442 Q02088
Caenorhabditis elegans (Cel) CE28782
(WBGene00002978)		 GI:17510803
Caenorhabditis elegans (Cel) CE29058 GI:17510809
Caenorhabditis elegans (Cel) CE29059 GI:17510805
Caenorhabditis elegans (Cel) CE29060 GI:17510807
Drosophila melanogaster (Dme) 7299991 GI:7299991
Drosophila melanogaster (Dme) 7299992 GI:7299992
Drosophila melanogaster (Dme) 7299993 GI:17737977
Homo sapiens (Hsa) Hs14729747 GI:14729747
Homo sapiens (Hsa) Hs17462853 GI:17462853
Homo sapiens (Hsa) Hs17482462 GI:17482462
Homo sapiens (Hsa) Hs17490014 GI:17490014
Homo sapiens (Hsa) Hs18553161 GI:18553161
Homo sapiens (Hsa) Hs18585091 GI:18585091
Homo sapiens (Hsa) Hs18590249 GI:18590249
Homo sapiens (Hsa) Hs20070123 GI:20070123
Homo sapiens (Hsa) Hs20539050 GI:20539050
Homo sapiens (Hsa) Hs20539300 GI:20539300
Homo sapiens (Hsa) Hs20539590 GI:20539590
Homo sapiens (Hsa) Hs20545089 GI:20545089
Homo sapiens (Hsa) Hs4507649 GI:4507649
Homo sapiens (Hsa) Hs4507651 GI:4507651 Q9UCS3
Saccharomyces cerevisiae (Sce) YIL138c
(S000001400)		 GI:6322053 P40414
Saccharomyces cerevisiae (Sce) YNL079c
(S000005023)		 GI:6324250 P17536
Schizosaccharomyces pombe (Spo) SPAC27F1.02c GI:19115442 Q02088


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000142 cellular bud neck contractile ring C
IDA
SceS000005023
S000001400
GO:0005737 cytoplasm C
IDA
SpoSPAC27F1.02c
GO:0005826 actomyosin contractile ring C
IDA
SpoSPAC27F1.02c
GO:0005865 striated muscle thin filament C
IDA
CelWBGene00002978
GO:0032432 actin filament bundle C
IDA
SceS000005023
S000001400
SpoSPAC27F1.02c
GO:0003779 actin binding F
TAS
SpoSPAC27F1.02c
GO:0003786 actin lateral binding F
TAS
SceS000005023
S000001400
GO:0051015 actin filament binding F
IDA
CelWBGene00002978
GO:0000001 mitochondrion inheritance P
TAS
SceS000005023
S000001400
GO:0000003 reproduction P
IMP
CelWBGene00002978
GO:0000011 vacuole inheritance P
TAS
SceS000001400
S000005023
GO:0000915 cytokinesis, actomyosin contractile ring
assembly		 P
IMP
SpoSPAC27F1.02c
GO:0002119 nematode larval development P
IMP
CelWBGene00002978
GO:0006887 exocytosis P
TAS
SceS000001400
S000005023
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000005023
GO:0007015 actin filament organization P
TAS
SceS000005023
S000001400
GO:0007047 cellular cell wall organization P
RCA
SceS000005023
GO:0007118 budding cell apical bud growth P
TAS
SceS000005023
S000001400
GO:0007119 budding cell isotropic bud growth P
TAS
SceS000005023
S000001400
GO:0007124 pseudohyphal growth P
IMP
SceS000005023
GO:0008154 actin polymerization or depolymerization P
TAS
SceS000005023
S000001400
GO:0008298 intracellular mRNA localization P
RCA
SceS000005023
TAS
SceS000001400
S000005023
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002978
GO:0010171 body morphogenesis P
IMP
CelWBGene00002978
GO:0015031 protein transport P
RCA
SceS000005023
GO:0016192 vesicle-mediated transport P
TAS
SceS000005023
S000001400
GO:0018991 oviposition P
IMP
CelWBGene00002978
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00002978
GO:0030010 establishment of cell polarity P
TAS
SceS000001400
S000005023
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000005023
GO:0030447 filamentous growth P
IMP
SceS000005023
GO:0030833 regulation of actin filament polymerization P
IDA
CelWBGene00002978
GO:0032220 plasma membrane fusion involved in
cytogamy		 P
IMP
SpoSPAC27F1.02c
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPAC27F1.02c
GO:0034613 cellular protein localization P
RCA
SceS000005023
GO:0040011 locomotion P
IMP
CelWBGene00002978
GO:0040015 negative regulation of multicellular organism
growth		 P
IMP
CelWBGene00002978
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00002978
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00002978
GO:0043393 regulation of protein binding P
IDA
CelWBGene00002978
GO:0045184 establishment of protein localization P
RCA
SceS000005023
GO:0048308 organelle inheritance P
RCA
SceS000005023
GO:0051017 actin filament bundle assembly P
IGI
SceS000001400
S000005023
GO:0060465 pharynx development P
IMP
CelWBGene00002978
GO:0071519 actin filament bundle assembly involved in
actomyosin contractile ring formation		 P
NAS
SpoSPAC27F1.02c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39294

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) cdc8
(SPAC27F1.02c)		 GI:19115442 Q02088
Saccharomyces cerevisiae (Sce) TPM2
(S000001400)		 GI:6322053 P40414
Saccharomyces cerevisiae (Sce) TPM1
(S000005023)		 GI:6324250 P17536
Kluyveromyces lactis (Kla) KLLA0E18007g GI:50312953
Eremothecium gossypii (Ego) AGOS_AER424C GI:119873860
Magnaporthe grisea (Mgr) MGG_08078 GI:39945916
Neurospora crassa (Ncr) NCU01204.1 GI:32412434


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000142 cellular bud neck contractile ring C
IDA
SceS000005023
S000001400
GO:0005737 cytoplasm C
IDA
SpoSPAC27F1.02c
GO:0005826 actomyosin contractile ring C
IDA
SpoSPAC27F1.02c
GO:0032432 actin filament bundle C
IDA
SceS000005023
S000001400
SpoSPAC27F1.02c
GO:0003779 actin binding F
TAS
SpoSPAC27F1.02c
GO:0003786 actin lateral binding F
TAS
SceS000005023
S000001400
GO:0000001 mitochondrion inheritance P
TAS
SceS000005023
S000001400
GO:0000011 vacuole inheritance P
TAS
SceS000001400
S000005023
GO:0000915 cytokinesis, actomyosin contractile ring
assembly		 P
IMP
SpoSPAC27F1.02c
GO:0006887 exocytosis P
TAS
SceS000001400
S000005023
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000005023
GO:0007015 actin filament organization P
TAS
SceS000005023
S000001400
GO:0007047 cellular cell wall organization P
RCA
SceS000005023
GO:0007118 budding cell apical bud growth P
TAS
SceS000005023
S000001400
GO:0007119 budding cell isotropic bud growth P
TAS
SceS000005023
S000001400
GO:0007124 pseudohyphal growth P
IMP
SceS000005023
GO:0008154 actin polymerization or depolymerization P
TAS
SceS000005023
S000001400
GO:0008298 intracellular mRNA localization P
RCA
SceS000005023
TAS
SceS000001400
S000005023
GO:0015031 protein transport P
RCA
SceS000005023
GO:0016192 vesicle-mediated transport P
TAS
SceS000005023
S000001400
GO:0030010 establishment of cell polarity P
TAS
SceS000001400
S000005023
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000005023
GO:0030447 filamentous growth P
IMP
SceS000005023
GO:0032220 plasma membrane fusion involved in
cytogamy		 P
IMP
SpoSPAC27F1.02c
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPAC27F1.02c
GO:0034613 cellular protein localization P
RCA
SceS000005023
GO:0045184 establishment of protein localization P
RCA
SceS000005023
GO:0048308 organelle inheritance P
RCA
SceS000005023
GO:0051017 actin filament bundle assembly P
IGI
SceS000001400
S000005023
GO:0071519 actin filament bundle assembly involved in
actomyosin contractile ring formation		 P
NAS
SpoSPAC27F1.02c

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