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Search term: YNL097C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PHO23
SGD link S000005041
Alternative ID YNL097C
Description Probable component of the Rpd3 histone deacetylase complex, involved in transcriptional regulation of PHO5; C-terminus has similarity to human candidate tumor suppressor p33(ING1) and its isoform ING3
Synonyms YNL097C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1973 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Chromatin remodeling protein, contains PHD Zn-finger

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g54390 GI:15221811
Arabidopsis thaliana (Ath) At3g24010 GI:15229563
Caenorhabditis elegans (Cel) CE03200
(WBGene00008747)
GI:17551662 Q19401
Caenorhabditis elegans (Cel) CE05257
(WBGene00007524)
GI:17550336 Q17909
Caenorhabditis elegans (Cel) CE09550
(WBGene00009025)
GI:17567247 Q93548
Caenorhabditis elegans (Cel) CE19561
(WBGene00020287)
GI:17542224 A3QMD7
Caenorhabditis elegans (Cel) CE20286
(WBGene00013095)
GI:17537345 Q9XWJ8
Caenorhabditis elegans (Cel) CE23331
(WBGene00013799)
GI:17544444 Q9U2U9
Caenorhabditis elegans (Cel) CE29113 GI:17537105
Drosophila melanogaster (Dme) 7293493 GI:7293493
Drosophila melanogaster (Dme) 7298057 GI:7298057
Drosophila melanogaster (Dme) 7300308 GI:7300308
Drosophila melanogaster (Dme) 7304310_2 GI:7304310 Q9V4D4
Homo sapiens (Hsa) Hs17158001 GI:17158001
Homo sapiens (Hsa) Hs18644730
(ING5)
GI:18644730 Q8WYH8
Homo sapiens (Hsa) Hs19923771 GI:19923771
Homo sapiens (Hsa) Hs22061442 GI:22061442
Homo sapiens (Hsa) Hs4504695
(ING2)
GI:4504695 Q9H160
Homo sapiens (Hsa) Hs7705861 GI:7705861
Homo sapiens (Hsa) Hs9506659 GI:9506659
Saccharomyces cerevisiae (Sce) YHR090c
(S000001132)
GI:6321882 P38806
Saccharomyces cerevisiae (Sce) YNL097c
(S000005041)
GI:6324232 P50947
Saccharomyces cerevisiae (Sce) YOR064c
(S000005590)
GI:6324638 Q08465
Schizosaccharomyces pombe (Spo) SPAC3G9.08 GI:19114992 O42871
Schizosaccharomyces pombe (Spo) SPBC1709.11c GI:19112236 O74736
Encephalitozoon cuniculi (Ecu) ECU10g1090 GI:19074718 Q8SUD3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000118 histone deacetylase complex C
IDA
SceS000005041
GO:0000123 histone acetyltransferase complex C
ISS
SpoSPBC1709.11c
GO:0005634 nucleus C
IDA
AthAt3g24010
At1g54390
HsaING5
ING2
SceS000005041
S000001132
SpoSPBC1709.11c
SPAC3G9.08
GO:0005829 cytosol C
IDA
SpoSPBC1709.11c
GO:0016580 Sin3 complex C
IDA
HsaING2
GO:0016602 CCAAT-binding factor complex C
IDA
HsaING2
GO:0032221 Rpd3S complex C
IDA
SpoSPBC1709.11c
GO:0032777 Piccolo NuA4 histone acetyltransferase
complex
C
IDA
SceS000001132
GO:0033100 NuA3 histone acetyltransferase
complex
C
IDA
SceS000005590
IPI
SceS000005590
GO:0033698 Rpd3L complex C
IDA
SceS000005041
SpoSPBC1709.11c
GO:0035267 NuA4 histone acetyltransferase
complex
C
IDA
SpoSPAC3G9.08
IPI
SceS000001132
GO:0070210 Rpd3L-Expanded complex C
IDA
SceS000005041
SpoSPBC1709.11c
GO:0070776 MOZ/MORF histone acetyltransferase
complex
C
IDA
HsaING5
GO:0003677 DNA binding F
IDA
HsaING2
ISS
AthAt3g24010
GO:0003682 chromatin binding F
TAS
HsaING2
GO:0004402 histone acetyltransferase activity F
IDA
SceS000001132
IMP
SceS000005590
GO:0005515 protein binding F
IPI
HsaING2
ING5
GO:0016563 transcription activator activity F
IDA
HsaING2
GO:0019787 small conjugating protein ligase
activity
F
ISS
SpoSPBC1709.11c
SPAC3G9.08
GO:0032403 protein complex binding F
IDA
HsaING2
GO:0035064 methylated histone residue binding F
IDA
AthAt1g54390
At3g24010
SceS000001132
S000005041
S000005590
IGI
SpoSPAC3G9.08
IMP
SceS000005590
ISS
SpoSPBC1709.11c
GO:0000003 reproduction P
IMP
CelWBGene00020287
GO:0006260 DNA replication P
IDA
HsaING5
GO:0006281 DNA repair P
IDA
SceS000001132
IGI
SpoSPAC3G9.08
GO:0006338 chromatin remodeling P
NAS
SpoSPBC1709.11c
GO:0006355 regulation of transcription, DNA-dependent P
IDA
HsaING2
ISS
AthAt3g24010
GO:0006473 protein amino acid acetylation P
IDA
HsaING5
GO:0007165 signal transduction P
TAS
HsaING2
GO:0008285 negative regulation of cell proliferation P
IDA
HsaING5
GO:0010552 positive regulation of gene-specific transcription
from RNA polymerase II promoter
P
IMP
SceS000005041
GO:0016479 negative regulation of transcription from RNA
polymerase I promoter
P
IMP
SceS000005041
GO:0016481 negative regulation of transcription P
RCA
SceS000005041
GO:0016568 chromatin modification P
IMP
SceS000005041
S000005590
S000001132
IPI
SceS000005590
S000001132
S000005041
ISS
SceS000005041
S000001132
S000005590
SpoSPBC1709.11c
GO:0016573 histone acetylation P
IDA
SceS000001132
S000005590
ISS
SpoSPBC1709.11c
GO:0016575 histone deacetylation P
IDA
SceS000005041
GO:0030511 positive regulation of transforming growth factor
beta receptor signaling pathway
P
IDA
HsaING2
GO:0031939 negative regulation of chromatin silencing at
telomere
P
IMP
SceS000005041
GO:0043966 histone H3 acetylation P
IDA
HsaING5
GO:0045739 positive regulation of DNA repair P
IMP
SpoSPAC3G9.08
GO:0045926 negative regulation of growth P
IDA
HsaING5
GO:0045941 positive regulation of transcription P
IDA
HsaING5
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P
IMP
SpoSPAC3G9.08
GO:0090239 regulation of histone H4 acetylation P
IGI
SpoSPAC3G9.08

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40119

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ING1 GI:38201667
Pan troglodytes (Ptr) ING1 GI:114650671
Canis familiaris (Cfa) LOC476984 GI:57103416
Canis familiaris (Cfa) LOC478381 GI:57108731
Mus musculus (Mmu) Ing1
(MGI:1349481)
GI:29336057 Q3ULE3
Rattus norvegicus (Rno) Ing1
(RGD:1306330)
GI:84370364
Gallus gallus (Gga) ING1 GI:118084350
Drosophila melanogaster (Dme) CG7379
(FBgn0038546)
GI:24647779
Anopheles gambiae (Aga) AgaP_AGAP001373 GI:58396247
Schizosaccharomyces pombe (Spo) png2
(SPBC1709.11c)
GI:19112236 O74736
Saccharomyces cerevisiae (Sce) PHO23
(S000005041)
GI:6324232 P50947
Kluyveromyces lactis (Kla) KLLA0C13409g GI:50305675
Eremothecium gossypii (Ego) AGOS_ADL263W GI:45187610


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000118 histone deacetylase complex C
IDA
SceS000005041
GO:0000123 histone acetyltransferase complex C
ISS
SpoSPBC1709.11c
GO:0005634 nucleus C
IDA
SceS000005041
SpoSPBC1709.11c
NAS
HsaING1
GO:0005829 cytosol C
IDA
SpoSPBC1709.11c
GO:0032221 Rpd3S complex C
IDA
SpoSPBC1709.11c
GO:0033698 Rpd3L complex C
IDA
SceS000005041
SpoSPBC1709.11c
GO:0070210 Rpd3L-Expanded complex C
IDA
SceS000005041
SpoSPBC1709.11c
GO:0003674 molecular_function F
ND
HsaING1
GO:0016563 transcription activator activity F
IDA
MmuMGI:1349481
GO:0019787 small conjugating protein ligase
activity
F
ISS
SpoSPBC1709.11c
GO:0035064 methylated histone residue binding F
IDA
SceS000005041
ISS
SpoSPBC1709.11c
GO:0006338 chromatin remodeling P
NAS
SpoSPBC1709.11c
GO:0008285 negative regulation of cell proliferation P
TAS
HsaING1
GO:0010552 positive regulation of gene-specific transcription
from RNA polymerase II promoter
P
IMP
SceS000005041
GO:0016479 negative regulation of transcription from RNA
polymerase I promoter
P
IMP
SceS000005041
GO:0016481 negative regulation of transcription P
RCA
SceS000005041
GO:0016568 chromatin modification P
IMP
SceS000005041
IPI
SceS000005041
ISS
SceS000005041
SpoSPBC1709.11c
GO:0016573 histone acetylation P
ISS
SpoSPBC1709.11c
GO:0016575 histone deacetylation P
IDA
SceS000005041
GO:0030308 negative regulation of cell growth P
NAS
HsaING1
GO:0031939 negative regulation of chromatin silencing at
telomere
P
IMP
SceS000005041
GO:0045941 positive regulation of transcription P
IDA
MmuMGI:1349481

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4827

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga3455 ENSANGP00000009731
Ashbya gossypii (Ago) ago1478 ADL263W
Candida glabrata (Cgl) cgl1906 CAGL0G06556g
Debaryomyces hansenii (Dha) dha4840 DEHA0F10329g
Drosophila melanogaster (Dme) dme13128 CG7379-PA
(FBgn0038546)
Danio rerio (Dre) dre23148 ENSDARP00000002964
Danio rerio (Dre) dre23149 ENSDARP00000006562
(LOC559057)
Takifugu rubripes (Fru) fru6949 SINFRUP00000143377
Takifugu rubripes (Fru) fru6950 SINFRUP00000171268
Gallus gallus (Gga) gga2729 ENSGALP00000027168
(ING1)
Homo sapiens (Hsa) hsa9032 ENSP00000283537
Homo sapiens (Hsa) hsa9031 ENSP00000283538
Homo sapiens (Hsa) hsa9030 ENSP00000328436
(ING1)
Q9UK53-2
Homo sapiens (Hsa) hsa9029 ENSP00000345202
(ING1)
Q9UK53-4
Kluyveromyces lactis (Kla) kla1797 KLLA0C13409g
Mus musculus (Mmu) mmu25613 ENSMUSP00000062593
(MGI:1349481)
Q9QXV3-1
Neurospora crassa (Ncr) ncr3356 NCU03461.2
Rattus norvegicus (Rno) rno12793 ENSRNOP00000019454
(RGD:1306330)
Q2TSE3
Saccharomyces cerevisiae (Sce) sce5210 YNL097C
(S000005041)
Yarrowia lipolytica (Yli) yli4218 YALI0E08822g