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Search term: YNL126W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SPC98
SGD link S000005070
Alternative ID YNL126W
Description Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque
Synonyms YNL126W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2000 A-DHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Gamma-tubulin complex, DGRIP91/SPC98 component

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g43610 GI:15229724
Arabidopsis thaliana (Ath) At5g06680 GI:15240121
Drosophila melanogaster (Dme) 7292918 GI:7292918
Homo sapiens (Hsa) Hs15982588 GI:15982588
Homo sapiens (Hsa) Hs5453660
(TUBGCP3)		 GI:5453660 Q96CW5
Saccharomyces cerevisiae (Sce) YNL126w
(S000005070)		 GI:6324203 P53540
Schizosaccharomyces pombe (Spo) SPBC428.20c GI:19111990 Q9USQ2
Schizosaccharomyces pombe (Spo) SPBC902.01c GI:19111991
Encephalitozoon cuniculi (Ecu) ECU10g1750 GI:19074786 Q8SU99


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000923 equatorial microtubule organizing
center		 C
IDA
SpoSPBC428.20c
GO:0000928 gamma-tubulin small complex, spindle pole
body		 C
IPI
SceS000005070
GO:0000930 gamma-tubulin complex C
TAS
SpoSPBC428.20c
GO:0005634 nucleus C
IDA
SpoSPBC428.20c
GO:0005635 nuclear envelope C
IDA
AthAt5g06680
GO:0005737 cytoplasm C
IDA
HsaTUBGCP3
GO:0005813 centrosome C
IDA
HsaTUBGCP3
NAS
HsaTUBGCP3
GO:0005814 centriole C
IDA
HsaTUBGCP3
GO:0005816 spindle pole body C
IDA
SpoSPBC428.20c
GO:0005819 spindle C
NAS
HsaTUBGCP3
GO:0005822 inner plaque of spindle pole body C
IDA
SceS000005070
GO:0005824 outer plaque of spindle pole body C
IDA
SceS000005070
GO:0005827 polar microtubule C
IDA
HsaTUBGCP3
GO:0005829 cytosol C
EXP
HsaTUBGCP3
IDA
SpoSPBC428.20c
GO:0009898 internal side of plasma membrane C
IDA
AthAt5g06680
GO:0032153 cell division site C
IDA
SpoSPBC428.20c
GO:0005198 structural molecule activity F
NAS
HsaTUBGCP3
GO:0005200 structural constituent of cytoskeleton F
IPI
SceS000005070
NAS
HsaTUBGCP3
GO:0005515 protein binding F
IPI
HsaTUBGCP3
SpoSPBC428.20c
GO:0015631 tubulin binding F
ISS
AthAt5g06680
At3g43610
GO:0043015 gamma-tubulin binding F
IDA
HsaTUBGCP3
GO:0000216 M/G1 transition of mitotic cell
cycle		 P
IMP
SpoSPBC428.20c
GO:0000278 mitotic cell cycle P
RCA
SceS000005070
GO:0000279 M phase P
RCA
SceS000005070
GO:0007020 microtubule nucleation P
IC
SpoSPBC428.20c
IPI
SceS000005070
NAS
HsaTUBGCP3
TAS
AthAt5g06680
GO:0007094 mitotic cell cycle spindle assembly
checkpoint		 P
IMP
SpoSPBC428.20c
GO:0007163 establishment or maintenance of cell
polarity		 P
IMP
SpoSPBC428.20c
GO:0007338 single fertilization P
NAS
HsaTUBGCP3
GO:0030071 regulation of mitotic metaphase/anaphase
transition		 P
IC
SpoSPBC428.20c
GO:0030472 mitotic spindle organization in
nucleus		 P
IMP
SceS000005070
GO:0031122 cytoplasmic microtubule organization P
IMP
SpoSPBC428.20c
GO:0090307 spindle assembly involved in mitosis P
IMP
SpoSPBC428.20c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40110

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SPC98
(S000005070)		 GI:6324203 P53540
Kluyveromyces lactis (Kla) KLLA0F24222g GI:50312255
Eremothecium gossypii (Ego) AGOS_AGR338C GI:45201434


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000928 gamma-tubulin small complex, spindle pole
body		 C
IPI
SceS000005070
GO:0005822 inner plaque of spindle pole body C
IDA
SceS000005070
GO:0005824 outer plaque of spindle pole body C
IDA
SceS000005070
GO:0005200 structural constituent of cytoskeleton F
IPI
SceS000005070
GO:0000278 mitotic cell cycle P
RCA
SceS000005070
GO:0000279 M phase P
RCA
SceS000005070
GO:0007020 microtubule nucleation P
IPI
SceS000005070
GO:0030472 mitotic spindle organization in
nucleus		 P
IMP
SceS000005070

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3045

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4649 AGR338C
Arabidopsis thaliana (Ath) ath22870 At5g06680.1
Candida glabrata (Cgl) cgl4258 CAGL0L04136g
Cryptococcus neoformans (Cne) cne5230 179.m00077
Dictyostelium discoideum (Ddi) ddi12611 DDB0191482
Debaryomyces hansenii (Dha) dha923 DEHA0B05379g
Drosophila melanogaster (Dme) dme17744 CG10988-PA
(FBgn0001612)
Danio rerio (Dre) dre957 ENSDARP00000000726
Encephalitozoon cuniculi (Ecu) ecu702 19074786
Takifugu rubripes (Fru) fru23615 SINFRUP00000128696
Gallus gallus (Gga) gga2699 ENSGALP00000027138
(TUBGCP3)
Homo sapiens (Hsa) hsa9042 ENSP00000261965
(TUBGCP3)		 Q96CW5-1
Homo sapiens (Hsa) hsa9043 ENSP00000350591
Kluyveromyces lactis (Kla) kla5159 KLLA0F24222g
Mus musculus (Mmu) mmu25626 ENSMUSP00000000776
(MGI:2183752)		 P58854
Neurospora crassa (Ncr) ncr4195 NCU04319.2
Oryza sativa (Osa) osa52052 5994.m00170
Plasmodium falciparum (Pfa) pfa4791 PFI1620c
Rattus norvegicus (Rno) rno12784 ENSRNOP00000023012
(RGD:1305726)		 Q5U3X6
Saccharomyces cerevisiae (Sce) sce5242 YNL126W
(S000005070)
Schizosaccharomyces pombe (Spo) spo2743 SPBC428.20c Q9USQ2
Yarrowia lipolytica (Yli) yli2121 YALI0C09757g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000923 equatorial microtubule organizing
center		 C
IDA
SpoSPBC428.20c
GO:0000928 gamma-tubulin small complex, spindle pole
body		 C
IPI
SceS000005070
GO:0000930 gamma-tubulin complex C
TAS
SpoSPBC428.20c
GO:0005575 cellular_component C
ND
MmuMGI:2183752
GO:0005634 nucleus C
IDA
SpoSPBC428.20c
GO:0005635 nuclear envelope C
IDA
AthAt5g06680
GO:0005816 spindle pole body C
IDA
SpoSPBC428.20c
GO:0005822 inner plaque of spindle pole body C
IDA
SceS000005070
GO:0005824 outer plaque of spindle pole body C
IDA
SceS000005070
GO:0005829 cytosol C
IDA
SpoSPBC428.20c
GO:0005875 microtubule associated complex C
ISS
DmeFBgn0001612
GO:0008275 gamma-tubulin small complex C
IDA
DmeFBgn0001612
IPI
DmeFBgn0001612
NAS
DmeFBgn0001612
GO:0009898 internal side of plasma membrane C
IDA
AthAt5g06680
GO:0032153 cell division site C
IDA
SpoSPBC428.20c
GO:0003674 molecular_function F
ND
MmuMGI:2183752
GO:0005200 structural constituent of cytoskeleton F
IPI
SceS000005070
GO:0005515 protein binding F
IPI
SpoSPBC428.20c
GO:0008017 microtubule binding F
ISS
DmeFBgn0001612
GO:0015631 tubulin binding F
ISS
AthAt5g06680
GO:0043015 gamma-tubulin binding F
IDA
DmeFBgn0001612
GO:0051011 microtubule minus-end binding F
IDA
DmeFBgn0001612
GO:0000216 M/G1 transition of mitotic cell
cycle		 P
IMP
SpoSPBC428.20c
GO:0000278 mitotic cell cycle P
RCA
SceS000005070
GO:0000279 M phase P
RCA
SceS000005070
GO:0007017 microtubule-based process P
ISS
DmeFBgn0001612
GO:0007020 microtubule nucleation P
IC
SpoSPBC428.20c
IDA
DmeFBgn0001612
IPI
SceS000005070
TAS
AthAt5g06680
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0001612
GO:0007094 mitotic cell cycle spindle assembly
checkpoint		 P
IMP
SpoSPBC428.20c
GO:0007126 meiosis P
IMP
DmeFBgn0001612
GO:0007127 meiosis I P
IMP
DmeFBgn0001612
GO:0007163 establishment or maintenance of cell
polarity		 P
IMP
SpoSPBC428.20c
GO:0008150 biological_process P
ND
MmuMGI:2183752
GO:0030071 regulation of mitotic metaphase/anaphase
transition		 P
IC
SpoSPBC428.20c
GO:0030472 mitotic spindle organization in
nucleus		 P
IMP
SceS000005070
GO:0031122 cytoplasmic microtubule organization P
IMP
SpoSPBC428.20c
GO:0051297 centrosome organization P
IMP
DmeFBgn0001612
GO:0051322 anaphase P
IMP
DmeFBgn0001612
GO:0090307 spindle assembly involved in mitosis P
IMP
SpoSPBC428.20c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC428.20c
(Q9USQ2)		 YNL126W
(S000005070)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000923 equatorial microtubule organizing
center		 C
IDA
SpoSPBC428.20c
GO:0000928 gamma-tubulin small complex, spindle pole
body		 C
IPI
SceS000005070
GO:0000930 gamma-tubulin complex C
TAS
SpoSPBC428.20c
GO:0005634 nucleus C
IDA
SpoSPBC428.20c
GO:0005816 spindle pole body C
IDA
SpoSPBC428.20c
GO:0005822 inner plaque of spindle pole body C
IDA
SceS000005070
GO:0005824 outer plaque of spindle pole body C
IDA
SceS000005070
GO:0005829 cytosol C
IDA
SpoSPBC428.20c
GO:0032153 cell division site C
IDA
SpoSPBC428.20c
GO:0005200 structural constituent of cytoskeleton F
IPI
SceS000005070
GO:0005515 protein binding F
IPI
SpoSPBC428.20c
GO:0000216 M/G1 transition of mitotic cell
cycle		 P
IMP
SpoSPBC428.20c
GO:0000278 mitotic cell cycle P
RCA
SceS000005070
GO:0000279 M phase P
RCA
SceS000005070
GO:0007020 microtubule nucleation P
IC
SpoSPBC428.20c
IPI
SceS000005070
GO:0007094 mitotic cell cycle spindle assembly
checkpoint		 P
IMP
SpoSPBC428.20c
GO:0007163 establishment or maintenance of cell
polarity		 P
IMP
SpoSPBC428.20c
GO:0030071 regulation of mitotic metaphase/anaphase
transition		 P
IC
SpoSPBC428.20c
GO:0030472 mitotic spindle organization in
nucleus		 P
IMP
SceS000005070
GO:0031122 cytoplasmic microtubule organization P
IMP
SpoSPBC428.20c
GO:0090307 spindle assembly involved in mitosis P
IMP
SpoSPBC428.20c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk