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Search term: YNL168C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name FMP41
SGD link S000005112
Alternative ID YNL168C
Description Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
Synonyms YNL168C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1535 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Predicted fumarylacetoacetate hydralase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g16700 GI:15228286
Arabidopsis thaliana (Ath) At4g15940 GI:15234757
Arabidopsis thaliana (Ath) At4g15950 GI:15234758
Caenorhabditis elegans (Cel) CE00461
(WBGene00022798)
GI:17557057 P34673
Drosophila melanogaster (Dme) 7294498 GI:7294498
Drosophila melanogaster (Dme) 7300707 GI:7300707
Drosophila melanogaster (Dme) 7300802 GI:7300802
Homo sapiens (Hsa) Hs13637384 GI:13637384
Homo sapiens (Hsa) Hs13654274
(FAHD1)
GI:13654274 Q9HAZ7
Homo sapiens (Hsa) Hs22042302 GI:22042302
Homo sapiens (Hsa) Hs22060084 GI:22060084
Homo sapiens (Hsa) Hs7705608 GI:7705608
Saccharomyces cerevisiae (Sce) YNL168c
(S000005112)
GI:6324161 P53889
Schizosaccharomyces pombe (Spo) SPBC21C3.09c GI:19113381 Q9P7L4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000418 DNA-directed RNA polymerase IV
complex
C
IPI
AthAt4g15950
GO:0005575 cellular_component C
ND
AthAt3g16700
GO:0005634 nucleus C
IDA
AthAt4g15950
GO:0005739 mitochondrion C
IDA
AthAt4g15940
HsaFAHD1
SceS000005112
ISS
SpoSPBC21C3.09c
GO:0080137 DNA-directed RNA polymerase V complex C
IPI
AthAt4g15950
GO:0003674 molecular_function F
ND
AthAt4g15950
SceS000005112
GO:0003824 catalytic activity F
ISS
AthAt4g15940
At3g16700
GO:0005507 copper ion binding F
IDA
AthAt4g15940
At3g16700
GO:0005515 protein binding F
IPI
HsaFAHD1
GO:0016787 hydrolase activity F
ISS
SpoSPBC21C3.09c
GO:0002119 nematode larval development P
IMP
CelWBGene00022798
GO:0006572 tyrosine catabolic process P
ISS
SpoSPBC21C3.09c
GO:0008150 biological_process P
ND
SceS000005112
GO:0008152 metabolic process P
ISS
AthAt4g15940
At3g16700
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00022798
GO:0010426 DNA methylation on cytosine within a CHH
sequence
P
IMP
AthAt4g15950
GO:0016246 RNA interference P
IMP
AthAt4g15950
GO:0030422 production of siRNA involved in RNA
interference
P
IGI
AthAt4g15950
GO:0040007 growth P
IMP
CelWBGene00022798

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6774

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) FAHD1 GI:13654274 Q9HAZ7
Pan troglodytes (Ptr) FAHD1 GI:114664849
Canis familiaris (Cfa) FAHD1 GI:57088567
Mus musculus (Mmu) Fahd1
(MGI:1915886)
GI:12963697 Q3UQY4
Rattus norvegicus (Rno) Fahd1
(RGD:1304560)
GI:68163417
Drosophila melanogaster (Dme) CG5793
(FBgn0038858)
GI:28571789
Anopheles gambiae (Aga) AgaP_AGAP001942 GI:158301425
Caenorhabditis elegans (Cel) ZK688.3
(CE00461;
WBGene00022798)
GI:17557057 P34673
Schizosaccharomyces pombe (Spo) SPBC21C3.09c GI:19113381 Q9P7L4
Saccharomyces cerevisiae (Sce) FMP41
(S000005112)
GI:6324161 P53889
Kluyveromyces lactis (Kla) KLLA0D08052g GI:50306893
Magnaporthe grisea (Mgr) MGG_00550 GI:39974607
Neurospora crassa (Ncr) NCU03283.1 GI:32420551
Arabidopsis thaliana (Ath) AT4G15940 GI:15234757
Arabidopsis thaliana (Ath) AT3G16700 GI:15228286
Oryza sativa (Osa) Os03g0829000 GI:115456357


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g16700
GO:0005739 mitochondrion C
IDA
AthAt4g15940
HsaFAHD1
MmuMGI:1915886
SceS000005112
ISS
SpoSPBC21C3.09c
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1915886
GO:0003674 molecular_function F
ND
MmuMGI:1915886
SceS000005112
GO:0003824 catalytic activity F
ISS
AthAt4g15940
At3g16700
GO:0005507 copper ion binding F
IDA
AthAt4g15940
At3g16700
GO:0005515 protein binding F
IPI
HsaFAHD1
GO:0016787 hydrolase activity F
ISS
SpoSPBC21C3.09c
GO:0002119 nematode larval development P
IMP
CelWBGene00022798
GO:0006572 tyrosine catabolic process P
ISS
SpoSPBC21C3.09c
GO:0008150 biological_process P
ND
MmuMGI:1915886
SceS000005112
GO:0008152 metabolic process P
ISS
AthAt4g15940
At3g16700
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00022798
GO:0040007 growth P
IMP
CelWBGene00022798

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_424

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga8753 ENSANGP00000019158
Anopheles gambiae (Aga) aga8752 ENSANGP00000026829
Ashbya gossypii (Ago) ago3216 AFR024C
Arabidopsis thaliana (Ath) ath13913 At3g16700.1
Arabidopsis thaliana (Ath) ath19418 At4g15940.1
Caenorhabditis elegans (Cel) cel22168 ZK688.3
(CE00461;
WBGene00022798)
Candida glabrata (Cgl) cgl3261 CAGL0J06204g
Cryptococcus neoformans (Cne) cne5760 179.m00635
Cryptococcus neoformans (Cne) cne2515 181.m08559
Cryptococcus neoformans (Cne) cne3881 185.m02468
Dictyostelium discoideum (Ddi) ddi1395 DDB0167445
Dictyostelium discoideum (Ddi) ddi10155 DDB0192072
Debaryomyces hansenii (Dha) dha1479 DEHA0C01067g
Debaryomyces hansenii (Dha) dha2275 DEHA0C19030g
Debaryomyces hansenii (Dha) dha2311 DEHA0D00605g
Debaryomyces hansenii (Dha) dha2533 DEHA0D05291g
Drosophila melanogaster (Dme) dme13637 CG5793-PA
(FBgn0038858)
Drosophila melanogaster (Dme) dme13778 CG6028-PA
(FBgn0038924)
Danio rerio (Dre) dre8603 ENSDARP00000027775
Danio rerio (Dre) dre17156 ENSDARP00000042367
(LOC571529)
Danio rerio (Dre) dre28816 ENSDARP00000044523
Escherichia coli (Eco) eco1142 16129143
Takifugu rubripes (Fru) fru29520 SINFRUP00000129219
Takifugu rubripes (Fru) fru24730 SINFRUP00000141167
Gallus gallus (Gga) gga24673 ENSGALP00000000719
(FAHD2A)
Homo sapiens (Hsa) hsa18223 ENSP00000233379
(FAHD2A)
Q96GK7
Homo sapiens (Hsa) hsa18278 ENSP00000272610
(FAHD2B)
Q6P2I3
Homo sapiens (Hsa) hsa18237 ENSP00000288917
Homo sapiens (Hsa) hsa11454 ENSP00000314622
Homo sapiens (Hsa) hsa18238 ENSP00000350953
Kluyveromyces lactis (Kla) kla2421 KLLA0D08052g
Mus musculus (Mmu) mmu15455 ENSMUSP00000028848
(MGI:1915376)
Q3TC72
Mus musculus (Mmu) mmu11117 ENSMUSP00000055827
(MGI:1915886)
Q3UQY4
Neurospora crassa (Ncr) ncr3181 NCU03283.2
Neurospora crassa (Ncr) ncr7307 NCU07506.2
Neurospora crassa (Ncr) ncr7810 NCU08018.2
Oryza sativa (Osa) osa20884 3571.m00149
Oryza sativa (Osa) osa20925 3571.m00174
Oryza sativa (Osa) osa62381 6672.m00209
Rattus norvegicus (Rno) rno19664 ENSRNOP00000018922
(RGD:1563674)
B2RYW9
Rattus norvegicus (Rno) rno4633 ENSRNOP00000019767
(RGD:1304560)
Q6AYQ8
Saccharomyces cerevisiae (Sce) sce5289 YNL168C
(S000005112)
Schizosaccharomyces pombe (Spo) spo2998 SPBC21C3.09c Q9P7L4
Yarrowia lipolytica (Yli) yli872 YALI0B03080g
Yarrowia lipolytica (Yli) yli2646 YALI0C23122g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g16700
GO:0005739 mitochondrion C
IDA
AthAt4g15940
MmuMGI:1915886
MGI:1915376
SceS000005112
ISS
SpoSPBC21C3.09c
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1915886
GO:0003674 molecular_function F
ND
MmuMGI:1915886
MGI:1915376
SceS000005112
GO:0003824 catalytic activity F
ISS
AthAt4g15940
At3g16700
GO:0005507 copper ion binding F
IDA
AthAt4g15940
At3g16700
GO:0016787 hydrolase activity F
ISS
SpoSPBC21C3.09c
GO:0002119 nematode larval development P
IMP
CelWBGene00022798
GO:0006572 tyrosine catabolic process P
ISS
SpoSPBC21C3.09c
GO:0008150 biological_process P
ND
MmuMGI:1915886
MGI:1915376
SceS000005112
GO:0008152 metabolic process P
ISS
AthAt4g15940
At3g16700
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00022798
GO:0040007 growth P
IMP
CelWBGene00022798

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC21C3.09c
(Q9P7L4)
YNL168C
(S000005112)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000005112
ISS
SpoSPBC21C3.09c
GO:0003674 molecular_function F
ND
SceS000005112
GO:0016787 hydrolase activity F
ISS
SpoSPBC21C3.09c
GO:0006572 tyrosine catabolic process P
ISS
SpoSPBC21C3.09c
GO:0008150 biological_process P
ND
SceS000005112

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Search for gene by ID or name:

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GO info in one table:

s.khadayate@ucl.ac.uk