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Search term: YNL221C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name POP1
SGD link S000005165
Alternative ID YNL221C
Description Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursors to generate mature 5' ends; binds to the RPR1 RNA subunit in RNase P
Synonyms YNL221C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3322 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Ribonucleases P/MRP protein subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g47290 GI:15226554
Arabidopsis thaliana (Ath) At2g47300 GI:15226556
Caenorhabditis elegans (Cel) CE24787
(WBGene00015486)		 GI:17552030 Q11188
Drosophila melanogaster (Dme) 7290599 GI:18857951
Homo sapiens (Hsa) Hs17467208 GI:17467208
Saccharomyces cerevisiae (Sce) YNL221c
(S000005165)		 GI:6324108 P41812
Schizosaccharomyces pombe (Spo) SPAC25B8.16 GI:19115388 Q9UTA4
Encephalitozoon cuniculi (Ecu) ECU08g0190 GI:19173346 Q8SUT6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000172 ribonuclease MRP complex C
NAS
SpoSPAC25B8.16
TAS
SceS000005165
GO:0005575 cellular_component C
ND
AthAt2g47300
GO:0005634 nucleus C
IDA
SpoSPAC25B8.16
GO:0005655 nucleolar ribonuclease P complex C
IDA
SceS000005165
ISS
SpoSPAC25B8.16
GO:0005730 nucleolus C
IDA
SpoSPAC25B8.16
GO:0000171 ribonuclease MRP activity F
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0004526 ribonuclease P activity F
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0000003 reproduction P
IMP
CelWBGene00015486
GO:0002119 nematode larval development P
IMP
CelWBGene00015486
GO:0006364 rRNA processing P
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0006379 mRNA cleavage P
IPI
SceS000005165
GO:0006399 tRNA metabolic process P
RCA
SceS000005165
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015486
GO:0008033 tRNA processing P
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015486
GO:0010171 body morphogenesis P
IMP
CelWBGene00015486
GO:0034965 intronic box C/D snoRNA processing P
IDA
SceS000005165
GO:0040007 growth P
IMP
CelWBGene00015486
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015486

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117902

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) POP1
(S000005165)		 GI:6324108 P41812
Kluyveromyces lactis (Kla) KLLA0D19448g GI:50307863
Eremothecium gossypii (Ego) AGOS_ABL187C GI:45185043


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000172 ribonuclease MRP complex C
TAS
SceS000005165
GO:0005655 nucleolar ribonuclease P complex C
IDA
SceS000005165
GO:0000171 ribonuclease MRP activity F
IMP
SceS000005165
GO:0004526 ribonuclease P activity F
IMP
SceS000005165
GO:0006364 rRNA processing P
IMP
SceS000005165
GO:0006379 mRNA cleavage P
IPI
SceS000005165
GO:0006399 tRNA metabolic process P
RCA
SceS000005165
GO:0008033 tRNA processing P
IMP
SceS000005165
GO:0034965 intronic box C/D snoRNA processing P
IDA
SceS000005165

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1842

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga14541 ENSANGP00000002151
Ashbya gossypii (Ago) ago405 ABL187C
Arabidopsis thaliana (Ath) ath11983 At2g47290.1
Caenorhabditis elegans (Cel) cel1147 C05D11.9
(CE24787;
WBGene00015486)
Candida glabrata (Cgl) cgl3741 CAGL0K05049g
Cryptococcus neoformans (Cne) cne215 162.m02660
Dictyostelium discoideum (Ddi) ddi10575 DDB0183819
Debaryomyces hansenii (Dha) dha358 DEHA0A08074g
Drosophila melanogaster (Dme) dme16597 CG32763-PA
(FBgn0026702)
Encephalitozoon cuniculi (Ecu) ecu177 19173346
Takifugu rubripes (Fru) fru9364 SINFRUP00000147875
Takifugu rubripes (Fru) fru9365 SINFRUP00000174448
Gallus gallus (Gga) gga24754 ENSGALP00000001101
Gallus gallus (Gga) gga27227 ENSGALP00000023282
Gallus gallus (Gga) gga27226 ENSGALP00000023283
Homo sapiens (Hsa) hsa30564 ENSP00000339529
(POP1)		 Q99575
Kluyveromyces lactis (Kla) kla2924 KLLA0D19448g
Mus musculus (Mmu) mmu8870 ENSMUSP00000052654
(MGI:1914974)		 Q8K205
Mus musculus (Mmu) mmu8869 ENSMUSP00000078037
(MGI:1914974)		 Q9D4G5
Neurospora crassa (Ncr) ncr668 NCU00690.2
Oryza sativa (Osa) osa79842 7453.m00137
Plasmodium falciparum (Pfa) pfa2273 MAL7P1.28
Rattus norvegicus (Rno) rno26949 ENSRNOP00000007190
(RGD:1308609)
Rattus norvegicus (Rno) rno26950 ENSRNOP00000036091
(RGD:1308609)
Saccharomyces cerevisiae (Sce) sce5342 YNL221C
(S000005165)
Schizosaccharomyces pombe (Spo) spo3018 SPAC25B8.16 Q9UTA4
Yarrowia lipolytica (Yli) yli5058 YALI0E29007g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000172 ribonuclease MRP complex C
NAS
SpoSPAC25B8.16
TAS
SceS000005165
GO:0005575 cellular_component C
ND
MmuMGI:1914974
GO:0005634 nucleus C
IDA
SpoSPAC25B8.16
GO:0005655 nucleolar ribonuclease P complex C
IDA
SceS000005165
ISS
SpoSPAC25B8.16
GO:0005730 nucleolus C
IDA
SpoSPAC25B8.16
GO:0000171 ribonuclease MRP activity F
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0003674 molecular_function F
ND
MmuMGI:1914974
GO:0004526 ribonuclease P activity F
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0000003 reproduction P
IMP
CelWBGene00015486
GO:0002119 nematode larval development P
IMP
CelWBGene00015486
GO:0006364 rRNA processing P
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0006379 mRNA cleavage P
IPI
SceS000005165
GO:0006399 tRNA metabolic process P
RCA
SceS000005165
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015486
GO:0008033 tRNA processing P
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0008150 biological_process P
ND
MmuMGI:1914974
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015486
GO:0010171 body morphogenesis P
IMP
CelWBGene00015486
GO:0034965 intronic box C/D snoRNA processing P
IDA
SceS000005165
GO:0040007 growth P
IMP
CelWBGene00015486
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015486

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC25B8.16
(Q9UTA4)		 YNL221C
(S000005165)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000172 ribonuclease MRP complex C
NAS
SpoSPAC25B8.16
TAS
SceS000005165
GO:0005634 nucleus C
IDA
SpoSPAC25B8.16
GO:0005655 nucleolar ribonuclease P complex C
IDA
SceS000005165
ISS
SpoSPAC25B8.16
GO:0005730 nucleolus C
IDA
SpoSPAC25B8.16
GO:0000171 ribonuclease MRP activity F
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0004526 ribonuclease P activity F
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0006364 rRNA processing P
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0006379 mRNA cleavage P
IPI
SceS000005165
GO:0006399 tRNA metabolic process P
RCA
SceS000005165
GO:0008033 tRNA processing P
IMP
SceS000005165
ISS
SpoSPAC25B8.16
GO:0034965 intronic box C/D snoRNA processing P
IDA
SceS000005165

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