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Search term: YNL287W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SEC21
SGD link S000005231
Alternative ID YNL287W
Description Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat; involved in ER to Golgi transport of selective cargo
Synonyms YNL287W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1078 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Vesicle coat complex COPI, gamma subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g16200 GI:15226705
Arabidopsis thaliana (Ath) At4g34450 GI:15236120
Caenorhabditis elegans (Cel) CE06451
(WBGene00011775)		 GI:17542430
Drosophila melanogaster (Dme) 7302058
(gammaCop)		 GI:17864148 Q9V9W9
Homo sapiens (Hsa) Hs11559929
(COPG)		 GI:11559929 Q9Y678
Homo sapiens (Hsa) Hs6912320 GI:6912320
Homo sapiens (Hsa) Hs18566723 GI:18566723
Saccharomyces cerevisiae (Sce) YNL287w
(S000005231)		 GI:6324042 P32074
Schizosaccharomyces pombe (Spo) SPAC57A7.10c GI:19114283 P87140
Encephalitozoon cuniculi (Ecu) ECU03g0270 GI:19172987 Q8SSC6
Arabidopsis thaliana (Ath) At2g16200 GI:15226705
Arabidopsis thaliana (Ath) At4g34450 GI:15236120
Caenorhabditis elegans (Cel) CE06451
(WBGene00011775)		 GI:17542430
Drosophila melanogaster (Dme) 7302058
(gammaCop)		 GI:17864148 Q9V9W9
Homo sapiens (Hsa) Hs11559929
(COPG)		 GI:11559929 Q9Y678
Homo sapiens (Hsa) Hs6912320 GI:6912320
Homo sapiens (Hsa) Hs18566723 GI:18566723
Saccharomyces cerevisiae (Sce) YNL287w
(S000005231)		 GI:6324042 P32074
Schizosaccharomyces pombe (Spo) SPAC57A7.10c GI:19114283 P87140
Encephalitozoon cuniculi (Ecu) ECU03g0270 GI:19172987 Q8SSC6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005768 endosome C
IDA
SceS000005231
GO:0005783 endoplasmic reticulum C
IDA
DmegammaCop
GO:0005794 Golgi apparatus C
IDA
DmegammaCop
GO:0005801 cis-Golgi network C
IDA
DmegammaCop
GO:0005829 cytosol C
EXP
HsaCOPG
IDA
SpoSPAC57A7.10c
GO:0009507 chloroplast C
IDA
AthAt4g34450
GO:0016020 membrane C
IDA
AthAt4g34450
GO:0030126 COPI vesicle coat C
IDA
SceS000005231
ISS
DmegammaCop
HsaCOPG
SpoSPAC57A7.10c
NAS
DmegammaCop
GO:0003674 molecular_function F
ND
SceS000005231
SpoSPAC57A7.10c
GO:0005515 protein binding F
IPI
HsaCOPG
GO:0030276 clathrin binding F
ISS
AthAt4g34450
GO:0000003 reproduction P
IMP
CelWBGene00011775
GO:0000910 cytokinesis P
IMP
DmegammaCop
GO:0002119 nematode larval development P
IMP
CelWBGene00011775
GO:0006886 intracellular protein transport P
IC
SpoSPAC57A7.10c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000005231
ISS
SpoSPAC57A7.10c
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
EXP
HsaCOPG
IMP
SceS000005231
ISS
DmegammaCop
SpoSPAC57A7.10c
NAS
DmegammaCop
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00011775
GO:0006911 phagocytosis, engulfment P
IMP
DmegammaCop
GO:0007424 open tracheal system development P
IMP
DmegammaCop
GO:0007436 larval salivary gland morphogenesis P
IMP
DmegammaCop
GO:0008362 chitin-based embryonic cuticle biosynthetic
process		 P
IMP
DmegammaCop
GO:0009306 protein secretion P
IMP
DmegammaCop
GO:0010883 regulation of lipid storage P
IDA
DmegammaCop
GO:0016044 cellular membrane organization P
EXP
HsaCOPG
GO:0016192 vesicle-mediated transport P
RCA
SceS000005231
GO:0030198 extracellular matrix organization P
IMP
DmegammaCop
GO:0032940 secretion by cell P
IMP
CelWBGene00011775
GO:0035147 branch fusion, open tracheal system P
IMP
DmegammaCop
GO:0035149 lumen formation, open tracheal
system		 P
IMP
DmegammaCop
GO:0035158 regulation of tube diameter, open tracheal
system		 P
IMP
DmegammaCop
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00011775
GO:0040011 locomotion P
IMP
CelWBGene00011775
GO:0045184 establishment of protein localization P
RCA
SceS000005231
GO:0048205 COPI coating of Golgi vesicle P
EXP
HsaCOPG

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
56292

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) COPG2 GI:109134349
Pan troglodytes (Ptr) COPG2 GI:114615965
Canis familiaris (Cfa) COPG2 GI:73975732
Mus musculus (Mmu) Copg2
(MGI:1858683)		 GI:8567340 Q922G9
Gallus gallus (Gga) COPG2 GI:118081889
Drosophila melanogaster (Dme) gammaCop GI:17864148 Q9V9W9
Anopheles gambiae (Aga) AgaP_AGAP009291 GI:158300099
Caenorhabditis elegans (Cel) T14G10.5
(CE06451;
WBGene00011775)		 GI:115532938
Schizosaccharomyces pombe (Spo) sec21
(SPAC57A7.10c)		 GI:19114283 P87140
Saccharomyces cerevisiae (Sce) SEC21
(S000005231)		 GI:6324042 P32074
Kluyveromyces lactis (Kla) KLLA0E13299g GI:50309085
Eremothecium gossypii (Ego) AGOS_AEL193W GI:45190414
Magnaporthe grisea (Mgr) MGG_02634 GI:39970335
Neurospora crassa (Ncr) NCU01992.1 GI:32417408
Arabidopsis thaliana (Ath) AT4G34450 GI:42567389
Oryza sativa (Osa) Os03g0227000 GI:115451685
Oryza sativa (Osa) Os07g0201100 GI:115471065


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005768 endosome C
IDA
SceS000005231
GO:0005783 endoplasmic reticulum C
IDA
DmegammaCop
GO:0005794 Golgi apparatus C
IDA
DmegammaCop
GO:0005801 cis-Golgi network C
IDA
DmegammaCop
GO:0005829 cytosol C
IDA
SpoSPAC57A7.10c
GO:0009507 chloroplast C
IDA
AthAt4g34450
GO:0016020 membrane C
IDA
AthAt4g34450
GO:0030126 COPI vesicle coat C
IDA
HsaCOPG2
SceS000005231
ISO
MmuMGI:1858683
ISS
DmegammaCop
SpoSPAC57A7.10c
NAS
DmegammaCop
GO:0003674 molecular_function F
ND
SceS000005231
SpoSPAC57A7.10c
GO:0005515 protein binding F
IPI
HsaCOPG2
GO:0030276 clathrin binding F
ISS
AthAt4g34450
GO:0000003 reproduction P
IMP
CelWBGene00011775
GO:0000910 cytokinesis P
IMP
DmegammaCop
GO:0002119 nematode larval development P
IMP
CelWBGene00011775
GO:0006886 intracellular protein transport P
IC
SpoSPAC57A7.10c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000005231
ISS
SpoSPAC57A7.10c
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000005231
ISS
DmegammaCop
SpoSPAC57A7.10c
NAS
DmegammaCop
TAS
HsaCOPG2
GO:0006891 intra-Golgi vesicle-mediated transport P
IDA
HsaCOPG2
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00011775
GO:0006911 phagocytosis, engulfment P
IMP
DmegammaCop
GO:0007424 open tracheal system development P
IMP
DmegammaCop
GO:0007436 larval salivary gland morphogenesis P
IMP
DmegammaCop
GO:0008362 chitin-based embryonic cuticle biosynthetic
process		 P
IMP
DmegammaCop
GO:0009306 protein secretion P
IMP
DmegammaCop
GO:0010883 regulation of lipid storage P
IDA
DmegammaCop
GO:0016192 vesicle-mediated transport P
RCA
SceS000005231
GO:0030198 extracellular matrix organization P
IMP
DmegammaCop
GO:0032940 secretion by cell P
IMP
CelWBGene00011775
GO:0035147 branch fusion, open tracheal system P
IMP
DmegammaCop
GO:0035149 lumen formation, open tracheal
system		 P
IMP
DmegammaCop
GO:0035158 regulation of tube diameter, open tracheal
system		 P
IMP
DmegammaCop
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00011775
GO:0040011 locomotion P
IMP
CelWBGene00011775
GO:0045184 establishment of protein localization P
RCA
SceS000005231

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1311

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga11444 ENSANGP00000018358
Ashbya gossypii (Ago) ago2313 AEL193W
Arabidopsis thaliana (Ath) ath21587 At4g34450.1
Caenorhabditis elegans (Cel) cel15506 T14G10.5
(CE06451;
WBGene00011775)
Candida glabrata (Cgl) cgl4809 CAGL0M03531g
Cryptococcus neoformans (Cne) cne981 163.m06460
Dictyostelium discoideum (Ddi) ddi9640 DDB0188394
Debaryomyces hansenii (Dha) dha169 DEHA0A03795g
Drosophila melanogaster (Dme) dme15379 CG1528-PA
(FBgn0028968)
Drosophila melanogaster (Dme) dme15380 CG1528-PB
(FBgn0028968)
Danio rerio (Dre) dre18248 ENSDARP00000043659
(copg2)		 Q1L8N9
Encephalitozoon cuniculi (Ecu) ecu394 19172987
Takifugu rubripes (Fru) fru11026 SINFRUP00000141705
Gallus gallus (Gga) gga5237 ENSGALP00000009418
Gallus gallus (Gga) gga5236 ENSGALP00000009419
Gallus gallus (Gga) gga5235 ENSGALP00000009420
(COPG)		 Q5F402
Gallus gallus (Gga) gga6852 ENSGALP00000013213
(COPG2)
Gallus gallus (Gga) gga6853 ENSGALP00000013214
Homo sapiens (Hsa) hsa23112 ENSP00000325002
(COPG)		 Q9Y678
Homo sapiens (Hsa) hsa29442 ENSP00000331218
(COPG2)		 Q9UBF2
Kluyveromyces lactis (Kla) kla3547 KLLA0E13299g
Mus musculus (Mmu) mmu22292 ENSMUSP00000032139
Neurospora crassa (Ncr) ncr1936 NCU01992.2
Oryza sativa (Osa) osa57688 6239.m00096
Oryza sativa (Osa) osa79985 7456.m00114
Oryza sativa (Osa) osa78354 7490.m00063
Plasmodium falciparum (Pfa) pfa910 PF11_0463
Rattus norvegicus (Rno) rno20990 ENSRNOP00000014734
(RGD:1566215)
Rattus norvegicus (Rno) rno21806 ENSRNOP00000016137
(RGD:1565292)		 Q4AEF8
Saccharomyces cerevisiae (Sce) sce5411 YNL287W
(S000005231)
Schizosaccharomyces pombe (Spo) spo4535 SPAC57A7.10c P87140
Yarrowia lipolytica (Yli) yli5484 YALI0F03454g