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Search term: YNL301C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL18B
SGD link S000005245
Alternative ID YNL301C
Description Protein component of the large (60S) ribosomal subunit, identical to Rpl18Ap and has similarity to rat L18 ribosomal protein
Synonyms YNL301C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1714 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60s ribosomal protein L18

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g47570 GI:7440855
Arabidopsis thaliana (Ath) At3g05590 GI:15230011
Arabidopsis thaliana (Ath) At5g27850 GI:15241061
Caenorhabditis elegans (Cel) CE16650
(WBGene00004430)		 GI:17542002 O45946
Drosophila melanogaster (Dme) 7295274 GI:7295274
Homo sapiens (Hsa) Hs17447863 GI:17447863
Homo sapiens (Hsa) Hs17488166 GI:17488166
Homo sapiens (Hsa) Hs22047128 GI:22047128
Homo sapiens (Hsa) Hs22047928 GI:22047928
Homo sapiens (Hsa) Hs22049081 GI:22049081
Homo sapiens (Hsa) Hs22050591 GI:22050591
Homo sapiens (Hsa) Hs22056579 GI:22056579
Homo sapiens (Hsa) Hs22056588 GI:22056588
Homo sapiens (Hsa) Hs22066328 GI:22066328
Homo sapiens (Hsa) Hs4506607
(RPL18)		 GI:4506607 Q07020
Saccharomyces cerevisiae (Sce) YNL301c
(S000005245)		 GI:6324028 P07279
Saccharomyces cerevisiae (Sce) YOL120c
(S000005480)		 GI:6324028 P07279
Schizosaccharomyces pombe (Spo) SPBC11C11.07 GI:19113189 Q10192
Encephalitozoon cuniculi (Ecu) ECU03g1490 GI:19173106 Q8SS76


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005773 vacuole C
IDA
AthAt3g05590
At5g27850
GO:0005829 cytosol C
EXP
HsaRPL18
IDA
SpoSPBC11C11.07
GO:0005886 plasma membrane C
IDA
AthAt3g05590
GO:0009507 chloroplast C
IDA
AthAt3g05590
GO:0015934 large ribosomal subunit C
IDA
AthAt3g05590
ISS
AthAt5g27850
At3g05590
At2g47570
TAS
AthAt3g05590
GO:0016020 membrane C
IDA
AthAt5g27850
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt5g27850
At3g05590
At2g47570
ISS
SpoSPBC11C11.07
TAS
HsaRPL18
SceS000005245
S000005480
GO:0022626 cytosolic ribosome C
IDA
AthAt5g27850
GO:0003723 RNA binding F
TAS
HsaRPL18
GO:0003735 structural constituent of ribosome F
ISS
AthAt3g05590
At2g47570
At5g27850
SpoSPBC11C11.07
TAS
AthAt3g05590
SceS000005245
S000005480
GO:0000003 reproduction P
IMP
CelWBGene00004430
GO:0002119 nematode larval development P
IMP
CelWBGene00004430
GO:0006412 translation P
ISS
AthAt2g47570
At5g27850
At3g05590
SpoSPBC11C11.07
TAS
AthAt3g05590
HsaRPL18
SceS000005245
S000005480
GO:0006414 translational elongation P
EXP
HsaRPL18
GO:0006417 regulation of translation P
RCA
SceS000005245
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004430
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004430
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004430
GO:0040007 growth P
IMP
CelWBGene00004430

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
756

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL18 GI:4506607 Q07020
Pan troglodytes (Ptr) RPL18 GI:114678150
Canis familiaris (Cfa) RPL18 GI:74006513
Mus musculus (Mmu) Rpl18
(MGI:98003)		 GI:83699424 P35980
Rattus norvegicus (Rno) Rpl18
(RGD:621182)		 GI:13592057
Drosophila melanogaster (Dme) RpL18
(FBgn0035753)		 GI:21357009
Anopheles gambiae (Aga) AgaP_AGAP007580 GI:158285411
Caenorhabditis elegans (Cel) rpl-18
(CE16650;
WBGene00004430)		 GI:17542002 O45946
Schizosaccharomyces pombe (Spo) rpl18-2
(SPAPB17E12.13)		 GI:67993614 Q8TFH1
Schizosaccharomyces pombe (Spo) rpl18 GI:19113189
Saccharomyces cerevisiae (Sce) RPL18B
(S000005245)		 GI:6324028 P07279
Saccharomyces cerevisiae (Sce) RPL18A
(S000005480)		 GI:6324452
Kluyveromyces lactis (Kla) KLLA0A07227g GI:50302769
Eremothecium gossypii (Ego) AGOS_ADL157C GI:45187716
Magnaporthe grisea (Mgr) MGG_04484 GI:39945004
Neurospora crassa (Ncr) NCU03988.1 GI:32405388
Arabidopsis thaliana (Ath) RPL18 GI:15230011
Arabidopsis thaliana (Ath) AT5G27850 GI:15241061
Oryza sativa (Osa) Os07g0674700 GI:115474037
Oryza sativa (Osa) Os03g0341100 GI:115452937
Oryza sativa (Osa) Os05g0155100 GI:115462177
Plasmodium falciparum (Pfa) MAL13P1.209 GI:124513558


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:98003
GO:0005773 vacuole C
IDA
AthAt5g27850
GO:0005829 cytosol C
EXP
HsaRPL18
IDA
SpoSPAPB17E12.13
GO:0015934 large ribosomal subunit C
ISS
AthAt5g27850
GO:0016020 membrane C
IDA
AthAt5g27850
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt5g27850
ISS
DmeFBgn0035753
PfaMAL13P1.209
SpoSPAPB17E12.13
TAS
HsaRPL18
SceS000005245
S000005480
GO:0022626 cytosolic ribosome C
IDA
AthAt5g27850
GO:0003674 molecular_function F
ND
MmuMGI:98003
GO:0003723 RNA binding F
TAS
HsaRPL18
GO:0003735 structural constituent of ribosome F
ISS
AthAt5g27850
DmeFBgn0035753
SpoSPAPB17E12.13
TAS
SceS000005245
S000005480
GO:0000003 reproduction P
IMP
CelWBGene00004430
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0035753
GO:0002119 nematode larval development P
IMP
CelWBGene00004430
GO:0006412 translation P
ISS
AthAt5g27850
DmeFBgn0035753
SpoSPAPB17E12.13
TAS
HsaRPL18
SceS000005245
S000005480
GO:0006414 translational elongation P
EXP
HsaRPL18
GO:0006417 regulation of translation P
RCA
SceS000005245
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004430
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0035753
GO:0008150 biological_process P
ND
MmuMGI:98003
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004430
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004430
GO:0040007 growth P
IMP
CelWBGene00004430

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1292

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2988 ENSANGP00000010955
Ashbya gossypii (Ago) ago1584 ADL157C
Arabidopsis thaliana (Ath) ath12616 At3g05590.1
Arabidopsis thaliana (Ath) ath25060 At5g27850.1
Caenorhabditis elegans (Cel) cel18920 Y45F10D.12
(CE16650;
WBGene00004430)
Candida glabrata (Cgl) cgl1030 CAGL0E02013g
Cryptococcus neoformans (Cne) cne1036 163.m06556
Cryptococcus neoformans (Cne) cne1037 163.m06557
Dictyostelium discoideum (Ddi) ddi12391 DDB0229960
Debaryomyces hansenii (Dha) dha5190 DEHA0F17985g
Drosophila melanogaster (Dme) dme8335 CG8615-PA
(FBgn0035753)
Danio rerio (Dre) dre15145 ENSDARP00000043172
(zgc:92872)		 Q6DGL0
Encephalitozoon cuniculi (Ecu) ecu513 19173106
Takifugu rubripes (Fru) fru1117 SINFRUP00000138747
Homo sapiens (Hsa) hsa16754 ENSP00000084795
(RPL18)		 Q07020
Kluyveromyces lactis (Kla) kla318 KLLA0A07227g
Mus musculus (Mmu) mmu22790 ENSMUSP00000053486
Neurospora crassa (Ncr) ncr3870 NCU03988.2
Oryza sativa (Osa) osa15812 3000.m00108
Oryza sativa (Osa) osa75485 7233.m00124
Oryza sativa (Osa) osa78098 7370.m00140
Oryza sativa (Osa) osa78128 7370.m00189
Plasmodium falciparum (Pfa) pfa3950 MAL13P1.209
Rattus norvegicus (Rno) rno1882 ENSRNOP00000028555
(RGD:621182)		 P12001
Saccharomyces cerevisiae (Sce) sce5425 YNL301C
(S000005245)
Saccharomyces cerevisiae (Sce) sce5678 YOL120C
(S000005480)
Schizosaccharomyces pombe (Spo) spo3535 SPAPB17E12.13 Q8TFH1
Schizosaccharomyces pombe (Spo) spo270 SPBC11C11.07 Q10192
Yarrowia lipolytica (Yli) yli1102 YALI0B08866g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005773 vacuole C
IDA
AthAt3g05590
At5g27850
GO:0005829 cytosol C
IDA
SpoSPBC11C11.07
SPAPB17E12.13
GO:0005886 plasma membrane C
IDA
AthAt3g05590
GO:0009507 chloroplast C
IDA
AthAt3g05590
GO:0015934 large ribosomal subunit C
IDA
AthAt3g05590
ISS
AthAt5g27850
At3g05590
TAS
AthAt3g05590
GO:0016020 membrane C
IDA
AthAt5g27850
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt5g27850
At3g05590
ISS
DmeFBgn0035753
PfaMAL13P1.209
SpoSPAPB17E12.13
SPBC11C11.07
TAS
SceS000005245
S000005480
GO:0022626 cytosolic ribosome C
IDA
AthAt5g27850
GO:0003735 structural constituent of ribosome F
ISS
AthAt3g05590
At5g27850
DmeFBgn0035753
SpoSPAPB17E12.13
SPBC11C11.07
TAS
AthAt3g05590
SceS000005245
S000005480
GO:0000003 reproduction P
IMP
CelWBGene00004430
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0035753
GO:0002119 nematode larval development P
IMP
CelWBGene00004430
GO:0006412 translation P
ISS
AthAt5g27850
At3g05590
DmeFBgn0035753
SpoSPAPB17E12.13
SPBC11C11.07
TAS
AthAt3g05590
SceS000005245
S000005480
GO:0006417 regulation of translation P
RCA
SceS000005245
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004430
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0035753
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004430
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004430
GO:0040007 growth P
IMP
CelWBGene00004430

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAPB17E12.13
(Q8TFH1)		 YNL301C
(S000005245)
SPBC11C11.07
(Q10192)		 YNL301C
(S000005245)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPBC11C11.07
SPAPB17E12.13
GO:0022625 cytosolic large ribosomal subunit C
ISS
SpoSPAPB17E12.13
SPBC11C11.07
TAS
SceS000005245
GO:0003735 structural constituent of ribosome F
ISS
SpoSPAPB17E12.13
SPBC11C11.07
TAS
SceS000005245
GO:0006412 translation P
ISS
SpoSPAPB17E12.13
SPBC11C11.07
TAS
SceS000005245
GO:0006417 regulation of translation P
RCA
SceS000005245

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk