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Search term: YOL012C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HTZ1
SGD link S000005372
Alternative ID YOL012C
Description Histone variant H2AZ, exchanged for histone H2A in nucleosomes by the SWR1 complex; involved in transcriptional regulation through prevention of the spread of silent heterochromatin
Synonyms YOL012C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1757 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Histone 2A

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g52740 GI:15219078
Arabidopsis thaliana (Ath) At2g38810 GI:15224957
Arabidopsis thaliana (Ath) At3g54560 GI:15232536
Arabidopsis thaliana (Ath) At4g13570 GI:15236314
Caenorhabditis elegans (Cel) CE07426
(WBGene00019947)		 GI:17541830 Q27511
Drosophila melanogaster (Dme) 7301509
(FBgn0001197)		 GI:17738227
Homo sapiens (Hsa) Hs20357599 GI:20357599 Q71UI9
Homo sapiens (Hsa) Hs20480010 GI:20480010
Homo sapiens (Hsa) Hs22055215 GI:22055215
Homo sapiens (Hsa) Hs4504255
(H2AFZ)		 GI:4504255 P0C0S5
Homo sapiens (Hsa) Hs6912616
(H2AFV)		 GI:6912616 Q71UI9
Saccharomyces cerevisiae (Sce) YOL012c
(S000005372)		 GI:6324562 Q12692
Schizosaccharomyces pombe (Spo) SPBC11B10.10c GI:19112422 P48003


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
NAS
DmeFBgn0001197
GO:0000790 nuclear chromatin C
IDA
SceS000005372
IPI
SceS000005372
GO:0000812 Swr1 complex C
IDA
SpoSPBC11B10.10c
GO:0005634 nucleus C
IDA
DmeFBgn0001197
HsaH2AFZ
SpoSPBC11B10.10c
GO:0005678 chromatin assembly complex C
IPI
SceS000005372
GO:0005694 chromosome C
IDA
DmeFBgn0001197
GO:0005700 polytene chromosome C
IDA
DmeFBgn0001197
GO:0005730 nucleolus C
IDA
AthAt2g38810
GO:0005739 mitochondrion C
IDA
SpoSPBC11B10.10c
GO:0005773 vacuole C
IDA
AthAt1g52740
GO:0005811 lipid particle C
IDA
DmeFBgn0001197
GO:0031011 Ino80 complex C
IDA
SpoSPBC11B10.10c
GO:0032993 protein-DNA complex C
RCA
SceS000005372
GO:0003677 DNA binding F
ISS
AthAt4g13570
At3g54560
At2g38810
At1g52740
NAS
DmeFBgn0001197
GO:0003682 chromatin binding F
IDA
SceS000005372
IGI
SceS000005372
ISS
SceS000005372
GO:0000003 reproduction P
IMP
CelWBGene00019947
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00019947
GO:0002119 nematode larval development P
IMP
CelWBGene00019947
GO:0006333 chromatin assembly or disassembly P
NAS
DmeFBgn0001197
GO:0006338 chromatin remodeling P
IPI
SpoSPBC11B10.10c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IGI
SceS000005372
IMP
SceS000005372
GO:0006730 one-carbon metabolic process P
RCA
SceS000005372
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0001197
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00019947
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000005372
GO:0009908 flower development P
IGI
AthAt3g54560
GO:0009909 regulation of flower development P
IGI
AthAt2g38810
At1g52740
GO:0010171 body morphogenesis P
IMP
CelWBGene00019947
GO:0016048 detection of temperature stimulus P
IGI
AthAt3g54560
At1g52740
GO:0016481 negative regulation of transcription P
RCA
SceS000005372
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IGI
SceS000005372
IPI
SceS000005372
GO:0040007 growth P
IMP
CelWBGene00019947
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00019947
GO:0040011 locomotion P
IMP
CelWBGene00019947
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00019947
GO:0042742 defense response to bacterium P
IGI
AthAt3g54560
At1g52740
GO:0043486 histone exchange P
IPI
SpoSPBC11B10.10c
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00019947
GO:0051276 chromosome organization P
IMP
SpoSPBC11B10.10c
RCA
SceS000005372
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000005372

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
83271

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) H2AFV GI:6912616 Q71UI9
Pan troglodytes (Ptr) LOC464225 GI:114620443
Canis familiaris (Cfa) LOC475501 GI:57097355
Rattus norvegicus (Rno) RGD1560813 GI:109506843
Drosophila melanogaster (Dme) His2Av
(FBgn0001197)		 GI:17738227
Anopheles gambiae (Aga) AgaP_AGAP000306 GI:119114983
Caenorhabditis elegans (Cel) htz-1
(CE07426;
WBGene00019947)		 GI:17541830 Q27511
Schizosaccharomyces pombe (Spo) pht1
(SPBC11B10.10c)		 GI:19112422 P48003
Saccharomyces cerevisiae (Sce) HTZ1
(S000005372)		 GI:6324562 Q12692
Kluyveromyces lactis (Kla) KLLA0C05918g GI:50305007
Eremothecium gossypii (Ego) AGOS_ACL017C GI:45185671
Magnaporthe grisea (Mgr) MGG_06213 GI:39975721
Neurospora crassa (Ncr) NCU05347.1 GI:32409443


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
NAS
DmeFBgn0001197
GO:0000790 nuclear chromatin C
IDA
SceS000005372
IPI
SceS000005372
GO:0000812 Swr1 complex C
IDA
SpoSPBC11B10.10c
GO:0005634 nucleus C
IDA
DmeFBgn0001197
SpoSPBC11B10.10c
GO:0005678 chromatin assembly complex C
IPI
SceS000005372
GO:0005694 chromosome C
IDA
DmeFBgn0001197
GO:0005700 polytene chromosome C
IDA
DmeFBgn0001197
GO:0005739 mitochondrion C
IDA
SpoSPBC11B10.10c
GO:0005811 lipid particle C
IDA
DmeFBgn0001197
GO:0031011 Ino80 complex C
IDA
SpoSPBC11B10.10c
GO:0032993 protein-DNA complex C
RCA
SceS000005372
GO:0003677 DNA binding F
NAS
DmeFBgn0001197
GO:0003682 chromatin binding F
IDA
SceS000005372
IGI
SceS000005372
ISS
SceS000005372
GO:0000003 reproduction P
IMP
CelWBGene00019947
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00019947
GO:0002119 nematode larval development P
IMP
CelWBGene00019947
GO:0006333 chromatin assembly or disassembly P
NAS
DmeFBgn0001197
GO:0006338 chromatin remodeling P
IPI
SpoSPBC11B10.10c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IGI
SceS000005372
IMP
SceS000005372
GO:0006730 one-carbon metabolic process P
RCA
SceS000005372
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0001197
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00019947
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000005372
GO:0010171 body morphogenesis P
IMP
CelWBGene00019947
GO:0016481 negative regulation of transcription P
RCA
SceS000005372
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IGI
SceS000005372
IPI
SceS000005372
GO:0040007 growth P
IMP
CelWBGene00019947
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00019947
GO:0040011 locomotion P
IMP
CelWBGene00019947
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00019947
GO:0043486 histone exchange P
IPI
SpoSPBC11B10.10c
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00019947
GO:0051276 chromosome organization P
IMP
SpoSPBC11B10.10c
RCA
SceS000005372
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000005372

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1301

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga14903 ENSANGP00000015579
Ashbya gossypii (Ago) ago1032 ACL017C
Arabidopsis thaliana (Ath) ath4561 At1g52740.1
Arabidopsis thaliana (Ath) ath10987 At2g38810.1
Arabidopsis thaliana (Ath) ath10988 At2g38810.2
Arabidopsis thaliana (Ath) ath10989 At2g38810.3
Arabidopsis thaliana (Ath) ath16823 At3g54560.1
Caenorhabditis elegans (Cel) cel13589 R08C7.3
(CE07426;
WBGene00019947)
Dictyostelium discoideum (Ddi) ddi12968 DDB0216302
Debaryomyces hansenii (Dha) dha3527 DEHA0E06501g
Drosophila melanogaster (Dme) dme14651 CG5499-PA
(FBgn0001197)
Danio rerio (Dre) dre18714 ENSDARP00000042826
Danio rerio (Dre) dre18712 ENSDARP00000044093
(h2afv)		 Q71PD7
Takifugu rubripes (Fru) fru28121 SINFRUP00000139912
Gallus gallus (Gga) gga26952 ENSGALP00000022676
(RCJMB04_2h11)
Homo sapiens (Hsa) hsa28558 ENSP00000222690
(H2AFV)		 A6NN01
Homo sapiens (Hsa) hsa24454 ENSP00000296417
(H2AFZ)		 P0C0S5
Homo sapiens (Hsa) hsa28561 ENSP00000308405
(H2AFV)		 Q71UI9
Kluyveromyces lactis (Kla) kla1460 KLLA0C05918g
Mus musculus (Mmu) mmu17611 ENSMUSP00000036907
(MGI:1888388)		 P0C0S6
Mus musculus (Mmu) mmu22541 ENSMUSP00000079502
Neurospora crassa (Ncr) ncr5192 NCU05347.2
Oryza sativa (Osa) osa16700 3139.m00124
Oryza sativa (Osa) osa16796 3142.m00119
Oryza sativa (Osa) osa26327 4117.m00199
Oryza sativa (Osa) osa50933 5863.m00174
Oryza sativa (Osa) osa65040 6725.m00142
Oryza sativa (Osa) osa85927 8753.m00186
Plasmodium falciparum (Pfa) pfa2859 PFC0920w
Rattus norvegicus (Rno) rno17072 ENSRNOP00000013919
(RGD:621464)		 P0C0S7
Rattus norvegicus (Rno) rno10715 ENSRNOP00000045180
(RGD:1587865)
Saccharomyces cerevisiae (Sce) sce5559 YOL012C
(S000005372)
Schizosaccharomyces pombe (Spo) spo3139 SPBC11B10.10c P48003
Yarrowia lipolytica (Yli) yli5455 YALI0F02827g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
NAS
DmeFBgn0001197
GO:0000790 nuclear chromatin C
IDA
SceS000005372
IPI
SceS000005372
GO:0000812 Swr1 complex C
IDA
SpoSPBC11B10.10c
GO:0005634 nucleus C
IDA
DmeFBgn0001197
MmuMGI:1888388
SpoSPBC11B10.10c
ISA
MmuMGI:1888388
GO:0005678 chromatin assembly complex C
IPI
SceS000005372
GO:0005694 chromosome C
IDA
DmeFBgn0001197
GO:0005700 polytene chromosome C
IDA
DmeFBgn0001197
GO:0005730 nucleolus C
IDA
AthAt2g38810
GO:0005739 mitochondrion C
IDA
SpoSPBC11B10.10c
GO:0005773 vacuole C
IDA
AthAt1g52740
GO:0005811 lipid particle C
IDA
DmeFBgn0001197
GO:0031011 Ino80 complex C
IDA
SpoSPBC11B10.10c
GO:0032993 protein-DNA complex C
RCA
SceS000005372
GO:0003677 DNA binding F
ISS
AthAt3g54560
At2g38810
At1g52740
NAS
DmeFBgn0001197
GO:0003682 chromatin binding F
IDA
SceS000005372
IGI
SceS000005372
ISS
SceS000005372
GO:0000003 reproduction P
IMP
CelWBGene00019947
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00019947
GO:0002119 nematode larval development P
IMP
CelWBGene00019947
GO:0006333 chromatin assembly or disassembly P
NAS
DmeFBgn0001197
GO:0006338 chromatin remodeling P
IPI
SpoSPBC11B10.10c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IGI
SceS000005372
IMP
SceS000005372
GO:0006730 one-carbon metabolic process P
RCA
SceS000005372
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0001197
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00019947
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000005372
GO:0009908 flower development P
IGI
AthAt3g54560
GO:0009909 regulation of flower development P
IGI
AthAt2g38810
At1g52740
GO:0010171 body morphogenesis P
IMP
CelWBGene00019947
GO:0016048 detection of temperature stimulus P
IGI
AthAt3g54560
At1g52740
GO:0016481 negative regulation of transcription P
RCA
SceS000005372
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IGI
SceS000005372
IPI
SceS000005372
GO:0040007 growth P
IMP
CelWBGene00019947
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00019947
GO:0040011 locomotion P
IMP
CelWBGene00019947
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00019947
GO:0042742 defense response to bacterium P
IGI
AthAt3g54560
At1g52740
GO:0043486 histone exchange P
IPI
SpoSPBC11B10.10c
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00019947
GO:0051276 chromosome organization P
IMP
SpoSPBC11B10.10c
RCA
SceS000005372
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000005372

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC11B10.10c
(P48003)		 YOL012C
(S000005372)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
SceS000005372
IPI
SceS000005372
GO:0000812 Swr1 complex C
IDA
SpoSPBC11B10.10c
GO:0005634 nucleus C
IDA
SpoSPBC11B10.10c
GO:0005678 chromatin assembly complex C
IPI
SceS000005372
GO:0005739 mitochondrion C
IDA
SpoSPBC11B10.10c
GO:0031011 Ino80 complex C
IDA
SpoSPBC11B10.10c
GO:0032993 protein-DNA complex C
RCA
SceS000005372
GO:0003682 chromatin binding F
IDA
SceS000005372
IGI
SceS000005372
ISS
SceS000005372
GO:0006338 chromatin remodeling P
IPI
SpoSPBC11B10.10c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IGI
SceS000005372
IMP
SceS000005372
GO:0006730 one-carbon metabolic process P
RCA
SceS000005372
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000005372
GO:0016481 negative regulation of transcription P
RCA
SceS000005372
GO:0030466 chromatin silencing at silent mating-type
cassette		 P
IGI
SceS000005372
IPI
SceS000005372
GO:0043486 histone exchange P
IPI
SpoSPBC11B10.10c
GO:0051276 chromosome organization P
IMP
SpoSPBC11B10.10c
RCA
SceS000005372
GO:0070481 nuclear-transcribed mRNA catabolic process,
non-stop decay		 P
IMP
SceS000005372

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GO info in one table:

s.khadayate@ucl.ac.uk