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Search term: YOL060C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MAM3
SGD link S000005421
Alternative ID YOL060C
Description Protein required for normal mitochondrial morphology, has similarity to hemolysins
Synonyms YOL060C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2118 AC-HYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Predicted membrane protein, contains two CBS domains

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g03270 GI:15218765
Arabidopsis thaliana (Ath) At1g47330 GI:15220172
Arabidopsis thaliana (Ath) At1g55930_2 GI:15222804
Arabidopsis thaliana (Ath) At2g14520 GI:15225950
Arabidopsis thaliana (Ath) At3g13070 GI:15230685
Arabidopsis thaliana (Ath) At4g14230 GI:15236441
Arabidopsis thaliana (Ath) At4g14240 GI:15236442
Arabidopsis thaliana (Ath) At4g33700 GI:15235049
Arabidopsis thaliana (Ath) At5g52790 GI:15237264
Caenorhabditis elegans (Cel) CE03570
(WBGene00011260)		 GI:17554630 Q18498
Caenorhabditis elegans (Cel) CE04764
(WBGene00019737)		 GI:17568959 Q21469
Caenorhabditis elegans (Cel) CE04765
(WBGene00016343)		 GI:17550766 Q22904
Caenorhabditis elegans (Cel) CE05189 GI:17505436
Caenorhabditis elegans (Cel) CE28434
(WBGene00016879)		 GI:17539402 A3QM97
Caenorhabditis elegans (Cel) CE28746
(WBGene00019869)		 GI:17569263 Q9GYL2
Homo sapiens (Hsa) Hs19923808 GI:19923808
Homo sapiens (Hsa) Hs20127563 GI:20127563
Homo sapiens (Hsa) Hs22042341 GI:22042341
Homo sapiens (Hsa) Hs9910370 GI:9910370
Homo sapiens (Hsa) Hs9966789 GI:9966789
Saccharomyces cerevisiae (Sce) YOL060c
(S000005421)		 GI:6324512 Q12296
Schizosaccharomyces pombe (Spo) SPCC4B3.03c GI:19075587 Q9USJ3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000329 fungal-type vacuole membrane C
IDA
SceS000005421
GO:0005575 cellular_component C
ND
AthAt4g14240
GO:0005737 cytoplasm C
IDA
SpoSPCC4B3.03c
GO:0005739 mitochondrion C
IDA
AthAt4g14230
GO:0005794 Golgi apparatus C
IDA
SpoSPCC4B3.03c
GO:0005886 plasma membrane C
IDA
AthAt4g33700
At1g47330
GO:0003674 molecular_function F
ND
AthAt1g47330
At1g55930
At3g13070
At4g14240
At1g03270
At4g14230
At2g14520
At4g33700
At5g52790
SceS000005421
SpoSPCC4B3.03c
GO:0006811 ion transport P
RCA
SceS000005421
GO:0007005 mitochondrion organization P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000005421
GO:0008150 biological_process P
ND
AthAt4g14230
At1g55930
At4g14240
At3g13070
At1g03270
At4g33700
At2g14520
At5g52790
At1g47330
GO:0030026 cellular manganese ion homeostasis P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00011260
GO:0050801 ion homeostasis P
RCA
SceS000005421

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40209

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPCC4B3.03c GI:19075587 Q9USJ3
Saccharomyces cerevisiae (Sce) MAM3
(S000005421)		 GI:6324512 Q12296
Kluyveromyces lactis (Kla) KLLA0C03960g GI:50304835
Eremothecium gossypii (Ego) AGOS_ADR312W GI:45188185
Magnaporthe grisea (Mgr) MGG_11236 GI:145613860
Neurospora crassa (Ncr) NCU04814.1 GI:32407158
Arabidopsis thaliana (Ath) AT1G47330 GI:22330087
Oryza sativa (Osa) Os03g0125800 GI:115450439


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000329 fungal-type vacuole membrane C
IDA
SceS000005421
GO:0005737 cytoplasm C
IDA
SpoSPCC4B3.03c
GO:0005794 Golgi apparatus C
IDA
SpoSPCC4B3.03c
GO:0005886 plasma membrane C
IDA
AthAt1g47330
GO:0003674 molecular_function F
ND
AthAt1g47330
SceS000005421
SpoSPCC4B3.03c
GO:0006811 ion transport P
RCA
SceS000005421
GO:0007005 mitochondrion organization P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000005421
GO:0008150 biological_process P
ND
AthAt1g47330
GO:0030026 cellular manganese ion homeostasis P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0050801 ion homeostasis P
RCA
SceS000005421

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_362

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4211 ENSANGP00000017636
Ashbya gossypii (Ago) ago2053 ADR312W
Arabidopsis thaliana (Ath) ath265 At1g03270.1
Arabidopsis thaliana (Ath) ath3991 At1g47330.1
Arabidopsis thaliana (Ath) ath8303 At2g14520.1
Arabidopsis thaliana (Ath) ath19200 At4g14230.1
Arabidopsis thaliana (Ath) ath19201 At4g14240.1
Arabidopsis thaliana (Ath) ath21490 At4g33700.1
Arabidopsis thaliana (Ath) ath27236 At5g52790.1
Caenorhabditis elegans (Cel) cel3270 C33D12.2
(CE04765;
WBGene00016343)
Caenorhabditis elegans (Cel) cel4590 C52D10.12
(CE28434;
WBGene00016879)
Caenorhabditis elegans (Cel) cel13303 R04E5.2
(CE28746;
WBGene00019869)
Candida glabrata (Cgl) cgl638 CAGL0C05159g
Cryptococcus neoformans (Cne) cne3168 167.m03504
Dictyostelium discoideum (Ddi) ddi6502 DDB0206299
Debaryomyces hansenii (Dha) dha1939 DEHA0C11506g
Drosophila melanogaster (Dme) dme19133 CG40084-PC
Drosophila melanogaster (Dme) dme19134 CG40084-PD
Danio rerio (Dre) dre15135 ENSDARP00000006571
Danio rerio (Dre) dre4251 ENSDARP00000009130
Danio rerio (Dre) dre4250 ENSDARP00000018982
Danio rerio (Dre) dre30882 ENSDARP00000041088
Takifugu rubripes (Fru) fru28149 SINFRUP00000134876
Takifugu rubripes (Fru) fru25217 SINFRUP00000145365
Takifugu rubripes (Fru) fru7539 SINFRUP00000170939
Takifugu rubripes (Fru) fru7538 SINFRUP00000173575
Takifugu rubripes (Fru) fru28151 SINFRUP00000174720
Gallus gallus (Gga) gga20785 ENSGALP00000013247
(CNNM2)
Homo sapiens (Hsa) hsa4542 ENSP00000278072
Homo sapiens (Hsa) hsa4541 ENSP00000286899
(CNNM2)		 Q9H8M5-2
Homo sapiens (Hsa) hsa18261 ENSP00000289065
Homo sapiens (Hsa) hsa4540 ENSP00000344840
Kluyveromyces lactis (Kla) kla1372 KLLA0C03960g
Mus musculus (Mmu) mmu189 ENSMUSP00000048049
(MGI:2151060)		 Q69ZF7
Mus musculus (Mmu) mmu13864 ENSMUSP00000076850
(MGI:2151054)		 Q3TWN3-2
Neurospora crassa (Ncr) ncr4675 NCU04814.2
Oryza sativa (Osa) osa21290 3591.m00120
Oryza sativa (Osa) osa609 380.m00107
Oryza sativa (Osa) osa33488 4537.m00141
Oryza sativa (Osa) osa56684 6199.m00142
Oryza sativa (Osa) osa63502 6623.m00147
Oryza sativa (Osa) osa63511 6623.m00308
Oryza sativa (Osa) osa86350 8381.m00071
Plasmodium falciparum (Pfa) pfa4778 PFI1560c
Rattus norvegicus (Rno) rno29874 ENSRNOP00000021434
(RGD:1305571)		 P0C588
Rattus norvegicus (Rno) rno4224 ENSRNOP00000027307
(RGD:1308162)
Saccharomyces cerevisiae (Sce) sce5612 YOL060C
(S000005421)
Schizosaccharomyces pombe (Spo) spo4588 SPCC4B3.03c Q9USJ3
Yarrowia lipolytica (Yli) yli5161 YALI0E31405g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000329 fungal-type vacuole membrane C
IDA
SceS000005421
GO:0005575 cellular_component C
ND
AthAt4g14240
MmuMGI:2151060
MGI:2151054
GO:0005737 cytoplasm C
IDA
SpoSPCC4B3.03c
GO:0005739 mitochondrion C
IDA
AthAt4g14230
GO:0005794 Golgi apparatus C
IDA
SpoSPCC4B3.03c
GO:0005886 plasma membrane C
IDA
AthAt4g33700
At1g47330
GO:0003674 molecular_function F
ND
AthAt1g47330
At4g14240
At1g03270
At4g14230
At2g14520
At4g33700
At5g52790
MmuMGI:2151060
MGI:2151054
SceS000005421
SpoSPCC4B3.03c
GO:0006811 ion transport P
RCA
SceS000005421
GO:0007005 mitochondrion organization P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000005421
GO:0008150 biological_process P
ND
AthAt4g14230
At4g14240
At1g03270
At4g33700
At2g14520
At5g52790
At1g47330
MmuMGI:2151060
MGI:2151054
GO:0030026 cellular manganese ion homeostasis P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0050801 ion homeostasis P
RCA
SceS000005421

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC4B3.03c
(Q9USJ3)		 YOL060C
(S000005421)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000329 fungal-type vacuole membrane C
IDA
SceS000005421
GO:0005737 cytoplasm C
IDA
SpoSPCC4B3.03c
GO:0005794 Golgi apparatus C
IDA
SpoSPCC4B3.03c
GO:0003674 molecular_function F
ND
SceS000005421
SpoSPCC4B3.03c
GO:0006811 ion transport P
RCA
SceS000005421
GO:0007005 mitochondrion organization P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000005421
GO:0030026 cellular manganese ion homeostasis P
IMP
SceS000005421
ISS
SpoSPCC4B3.03c
GO:0050801 ion homeostasis P
RCA
SceS000005421

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GO info in one table:

s.khadayate@ucl.ac.uk