YOGY Home YOGY Help

Search term: YOL095C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HMI1
SGD link S000005455
Alternative ID YOL095C
Description Mitochondrial inner membrane localized ATP-dependent DNA helicase, required for the maintenance of the mitochondrial genome; not required for mitochondrial transcription; has homology to E. coli helicase uvrD
Synonyms YOL095C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2108 A--HYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 3'-5' DNA helicase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g25120 GI:15234940
Homo sapiens (Hsa) Hs21703364 GI:20472038
Homo sapiens (Hsa) HsM14249492 GI:14249492
Saccharomyces cerevisiae (Sce) YJL092w
(S000003628)		 GI:6322369 P12954
Saccharomyces cerevisiae (Sce) YOL095c
(S000005455)		 GI:6324477 Q12039
Schizosaccharomyces pombe (Spo) SPAC4H3.05 GI:19115253 Q10213
Schizosaccharomyces pombe (Spo) SPBC336.01 GI:19112913 Q9USU3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000151 ubiquitin ligase complex C
ISS
SpoSPBC336.01
GO:0005634 nucleus C
IDA
SceS000003628
SpoSPAC4H3.05
SPBC336.01
NAS
SpoSPBC336.01
GO:0005739 mitochondrion C
IDA
SceS000005455
GO:0005759 mitochondrial matrix C
IDA
SceS000005455
GO:0005816 spindle pole body C
IDA
SpoSPAC4H3.05
GO:0005819 spindle C
IDA
SpoSPAC4H3.05
GO:0005829 cytosol C
IDA
SpoSPBC336.01
GO:0000739 DNA strand annealing activity F
IDA
AthAt4g25120
GO:0003678 DNA helicase activity F
IDA
AthAt4g25120
SceS000003628
ISS
SceS000003628
GO:0004003 ATP-dependent DNA helicase activity F
ISS
SpoSPAC4H3.05
RCA
SceS000003628
GO:0005515 protein binding F
IPI
SpoSPBC336.01
GO:0005524 ATP binding F
ISS
AthAt4g25120
GO:0008026 ATP-dependent helicase activity F
RCA
SceS000003628
GO:0008094 DNA-dependent ATPase activity F
RCA
SceS000003628
GO:0016887 ATPase activity F
RCA
SceS000003628
GO:0017116 single-stranded DNA-dependent ATP-dependent DNA
helicase activity		 F
IDA
SpoSPBC336.01
GO:0030674 protein binding, bridging F
ISS
SpoSPBC336.01
GO:0042623 ATPase activity, coupled F
RCA
SceS000003628
GO:0043138 3'-5' DNA helicase activity F
RCA
SceS000003628
GO:0043140 ATP-dependent 3'-5' DNA helicase
activity		 F
IDA
SceS000005455
GO:0070035 purine NTP-dependent helicase activity F
RCA
SceS000003628
GO:0000002 mitochondrial genome maintenance P
IMP
SceS000005455
GO:0000018 regulation of DNA recombination P
IGI
SpoSPBC336.01
GO:0000724 double-strand break repair via homologous
recombination		 P
IGI
SpoSPBC336.01
GO:0000725 recombinational repair P
IGI
SpoSPAC4H3.05
IMP
SpoSPAC4H3.05
GO:0006200 ATP catabolic process P
IDA
SpoSPBC336.01
ISS
SpoSPAC4H3.05
GO:0006260 DNA replication P
RCA
SceS000003628
GO:0006281 DNA repair P
IGI
SceS000003628
RCA
SceS000003628
GO:0006301 postreplication repair P
IGI
SpoSPAC4H3.05
GO:0006303 double-strand break repair via nonhomologous end
joining		 P
IDA
SceS000003628
GO:0006310 DNA recombination P
IDA
AthAt4g25120
IGI
SpoSPBC336.01
GO:0006974 response to DNA damage stimulus P
RCA
SceS000003628
GO:0007059 chromosome segregation P
IMP
SpoSPBC336.01
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000003628
GO:0031297 replication fork processing P
IMP
SpoSPBC336.01
TAS
SpoSPAC4H3.05
GO:0032042 mitochondrial DNA metabolic process P
IMP
SceS000005455
GO:0032508 DNA duplex unwinding P
IDA
SceS000003628
GO:0034644 cellular response to UV P
IMP
SpoSPAC4H3.05
GO:0051052 regulation of DNA metabolic process P
RCA
SceS000003628
GO:0051321 meiotic cell cycle P
RCA
SceS000003628

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40197

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) HMI1
(S000005455)		 GI:6324477 Q12039
Kluyveromyces lactis (Kla) KLLA0C03674g GI:50304809
Eremothecium gossypii (Ego) AGOS_ADR113W GI:45187986


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000005455
GO:0005759 mitochondrial matrix C
IDA
SceS000005455
GO:0043140 ATP-dependent 3'-5' DNA helicase
activity		 F
IDA
SceS000005455
GO:0000002 mitochondrial genome maintenance P
IMP
SceS000005455
GO:0032042 mitochondrial DNA metabolic process P
IMP
SceS000005455

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24768

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1854 ADR113W
Candida glabrata (Cgl) cgl2851 CAGL0I07623g
Debaryomyces hansenii (Dha) dha624 DEHA0A13948g
Kluyveromyces lactis (Kla) kla1359 KLLA0C03674g
Saccharomyces cerevisiae (Sce) sce5650 YOL095C
(S000005455)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000005455
GO:0005759 mitochondrial matrix C
IDA
SceS000005455
GO:0043140 ATP-dependent 3'-5' DNA helicase
activity		 F
IDA
SceS000005455
GO:0000002 mitochondrial genome maintenance P
IMP
SceS000005455
GO:0032042 mitochondrial DNA metabolic process P
IMP
SceS000005455

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk