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Search term: YOL124C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRM11
SGD link S000005484
Alternative ID YOL124C
Description Catalytic subunit of an adoMet-dependent tRNA methyltransferase complex (Trm11p-Trm112p), required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs; contains a THUMP domain and a methyltransferase domain
Synonyms YOL124C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2671 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Putative RNA methylase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g26410 GI:18404931
Caenorhabditis elegans (Cel) CE25550 GI:17510453
Drosophila melanogaster (Dme) 7296850 GI:7296850
Homo sapiens (Hsa) Hs11141893 GI:11141893
Saccharomyces cerevisiae (Sce) YOL124c
(S000005484)		 GI:6324448 Q12463
Schizosaccharomyces pombe (Spo) SPBC16D10.02 GI:19113289 O94636


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC16D10.02
ISS
SpoSPBC16D10.02
GO:0005737 cytoplasm C
IDA
SceS000005484
ISS
SpoSPBC16D10.02
GO:0005829 cytosol C
IDA
SpoSPBC16D10.02
GO:0043528 tRNA (m2G10) methyltransferase
complex		 C
IC
SpoSPBC16D10.02
GO:0003723 RNA binding F
ISS
SceS000005484
GO:0004809 tRNA (guanine-N2-)-methyltransferase
activity		 F
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02
GO:0008757 S-adenosylmethionine-dependent methyltransferase
activity		 F
ISS
SceS000005484
GO:0006399 tRNA metabolic process P
RCA
SceS000005484
GO:0009451 RNA modification P
RCA
SceS000005484
GO:0030488 tRNA methylation P
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6876

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TRMT11 GI:94420683
Pan troglodytes (Ptr) TRMT11 GI:114609173
Canis familiaris (Cfa) TRMT11 GI:57031873
Mus musculus (Mmu) Trmt11
(MGI:1920931)		 GI:114051171 Q9CWH5
Rattus norvegicus (Rno) Trmt11 GI:37591180
Gallus gallus (Gga) TRMT11 GI:45383420
Drosophila melanogaster (Dme) CG1074
(FBgn0037250)		 GI:28571505
Anopheles gambiae (Aga) AgaP_AGAP002384 GI:118782901
Caenorhabditis elegans (Cel) Y71F9AL.1
(CE29909;
WBGene00022107)		 GI:25143708
Schizosaccharomyces pombe (Spo) trm11
(SPBC16D10.02)		 GI:19113289 O94636
Saccharomyces cerevisiae (Sce) TRM11
(S000005484)		 GI:6324448 Q12463
Kluyveromyces lactis (Kla) KLLA0C12903g GI:50305629
Eremothecium gossypii (Ego) AGOS_ADL161C GI:45187712
Magnaporthe grisea (Mgr) MGG_06857 GI:145605800
Neurospora crassa (Ncr) NCU04407.1 GI:32406294
Arabidopsis thaliana (Ath) AT3G26410 GI:18404931
Oryza sativa (Osa) Os02g0556400 GI:115446699
Plasmodium falciparum (Pfa) PF13_0236 GI:124513594


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1920931
GO:0005634 nucleus C
IDA
SpoSPBC16D10.02
ISS
SpoSPBC16D10.02
GO:0005737 cytoplasm C
IDA
SceS000005484
ISS
SpoSPBC16D10.02
GO:0005829 cytosol C
IDA
SpoSPBC16D10.02
GO:0043528 tRNA (m2G10) methyltransferase
complex		 C
IC
SpoSPBC16D10.02
GO:0003674 molecular_function F
ND
MmuMGI:1920931
GO:0003723 RNA binding F
ISS
SceS000005484
GO:0004809 tRNA (guanine-N2-)-methyltransferase
activity		 F
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02
GO:0008757 S-adenosylmethionine-dependent methyltransferase
activity		 F
ISS
SceS000005484
GO:0006399 tRNA metabolic process P
RCA
SceS000005484
GO:0008150 biological_process P
ND
MmuMGI:1920931
GO:0009451 RNA modification P
RCA
SceS000005484
GO:0030488 tRNA methylation P
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1716

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4554 ENSANGP00000014779
Ashbya gossypii (Ago) ago1580 ADL161C
Arabidopsis thaliana (Ath) ath14975 At3g26410.1
Caenorhabditis elegans (Cel) cel20537 Y71F9AL.1
(CE29909;
WBGene00022107)
Candida glabrata (Cgl) cgl1026 CAGL0E01925g
Cryptococcus neoformans (Cne) cne3490 176.m02214
Dictyostelium discoideum (Ddi) ddi9799 DDB0185785
Debaryomyces hansenii (Dha) dha5196 DEHA0F18117g
Drosophila melanogaster (Dme) dme10874 CG1074-PA
(FBgn0037250)
Danio rerio (Dre) dre7504 ENSDARP00000014770
Takifugu rubripes (Fru) fru4956 SINFRUP00000136056
Gallus gallus (Gga) gga24743 ENSGALP00000001028
Gallus gallus (Gga) gga15468 ENSGALP00000023895
(TRMT11)		 Q6YJI5
Homo sapiens (Hsa) hsa27709 ENSP00000257983
Kluyveromyces lactis (Kla) kla1774 KLLA0C12903g
Mus musculus (Mmu) mmu1979 ENSMUSP00000019927
(MGI:1920931)		 Q9CWH5-1
Neurospora crassa (Ncr) ncr4279 NCU04407.2
Oryza sativa (Osa) osa6177 2441.m00099
Oryza sativa (Osa) osa6047 2469.m00155
Oryza sativa (Osa) osa24600 3865.m00143
Plasmodium falciparum (Pfa) pfa4420 PF13_0236
Rattus norvegicus (Rno) rno307 ENSRNOP00000019436
(RGD:727798)		 Q7TNK6
Saccharomyces cerevisiae (Sce) sce5682 YOL124C
(S000005484)
Schizosaccharomyces pombe (Spo) spo1308 SPBC16D10.02 O94636
Yarrowia lipolytica (Yli) yli2279 YALI0C13882g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1920931
GO:0005634 nucleus C
IDA
SpoSPBC16D10.02
ISS
SpoSPBC16D10.02
GO:0005737 cytoplasm C
IDA
SceS000005484
ISS
SpoSPBC16D10.02
GO:0005829 cytosol C
IDA
SpoSPBC16D10.02
GO:0043528 tRNA (m2G10) methyltransferase
complex		 C
IC
SpoSPBC16D10.02
GO:0003674 molecular_function F
ND
MmuMGI:1920931
GO:0003723 RNA binding F
ISS
SceS000005484
GO:0004809 tRNA (guanine-N2-)-methyltransferase
activity		 F
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02
GO:0008757 S-adenosylmethionine-dependent methyltransferase
activity		 F
ISS
SceS000005484
GO:0006399 tRNA metabolic process P
RCA
SceS000005484
GO:0008150 biological_process P
ND
MmuMGI:1920931
GO:0009451 RNA modification P
RCA
SceS000005484
GO:0030488 tRNA methylation P
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC16D10.02
(O94636)		 YOL124C
(S000005484)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC16D10.02
ISS
SpoSPBC16D10.02
GO:0005737 cytoplasm C
IDA
SceS000005484
ISS
SpoSPBC16D10.02
GO:0005829 cytosol C
IDA
SpoSPBC16D10.02
GO:0043528 tRNA (m2G10) methyltransferase
complex		 C
IC
SpoSPBC16D10.02
GO:0003723 RNA binding F
ISS
SceS000005484
GO:0004809 tRNA (guanine-N2-)-methyltransferase
activity		 F
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02
GO:0008757 S-adenosylmethionine-dependent methyltransferase
activity		 F
ISS
SceS000005484
GO:0006399 tRNA metabolic process P
RCA
SceS000005484
GO:0009451 RNA modification P
RCA
SceS000005484
GO:0030488 tRNA methylation P
IDA
SceS000005484
IMP
SceS000005484
ISS
SpoSPBC16D10.02

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GO info in one table:

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