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Search term: YOL138C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTC1
SGD link S000005498
Alternative ID YOL138C
Description Protein of unknown function; may interact with ribosomes, based on co-purification experiments; null mutation suppresses cdc13-1 temperature sensitivity
Synonyms YOL138C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0269 -CDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED WD40 repeat-containing protein

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE28516 GI:17555622
Drosophila melanogaster (Dme) 7301821 GI:4972748
Homo sapiens (Hsa) Hs14149987
(WDR24)		 GI:14149987 Q96S15
Saccharomyces cerevisiae (Sce) YOL138c
(S000005498)		 GI:6324434 Q08281
Schizosaccharomyces pombe (Spo) SPAC4F8.11 GI:19114774 O14186
Caenorhabditis elegans (Cel) CE28516 GI:17555622
Drosophila melanogaster (Dme) 7301821 GI:4972748
Homo sapiens (Hsa) Hs14149987
(WDR24)		 GI:14149987 Q96S15
Saccharomyces cerevisiae (Sce) YOL138c
(S000005498)		 GI:6324434 Q08281
Schizosaccharomyces pombe (Spo) SPAC4F8.11 GI:19114774 O14186
Caenorhabditis elegans (Cel) CE28516 GI:17555622
Drosophila melanogaster (Dme) 7301821 GI:4972748
Homo sapiens (Hsa) Hs14149987
(WDR24)		 GI:14149987 Q96S15
Saccharomyces cerevisiae (Sce) YOL138c
(S000005498)		 GI:6324434 Q08281
Schizosaccharomyces pombe (Spo) SPAC4F8.11 GI:19114774 O14186


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000005498
GO:0005778 peroxisomal membrane C
NAS
SpoSPAC4F8.11
GO:0005829 cytosol C
IDA
SpoSPAC4F8.11
GO:0005840 ribosome C
IDA
SceS000005498
GO:0043234 protein complex C
NAS
SpoSPAC4F8.11
GO:0003674 molecular_function F
ND
SceS000005498
SpoSPAC4F8.11
GO:0008150 biological_process P
ND
SceS000005498
SpoSPAC4F8.11

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40182

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) YOL138C
(S000005498)		 GI:6324434 Q08281
Kluyveromyces lactis (Kla) KLLA0E21043g GI:50309771
Eremothecium gossypii (Ego) AGOS_ADL186C GI:45187687


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000005498
GO:0005840 ribosome C
IDA
SceS000005498
GO:0003674 molecular_function F
ND
SceS000005498
GO:0008150 biological_process P
ND
SceS000005498

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3264

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3229 ENSANGP00000004131
Ashbya gossypii (Ago) ago1555 ADL186C
Caenorhabditis elegans (Cel) cel18128 Y32H12A.8
(CE42033;
WBGene00021316)
Candida glabrata (Cgl) cgl1006 CAGL0E01485g
Cryptococcus neoformans (Cne) cne361 162.m02989
Dictyostelium discoideum (Ddi) ddi8761 DDB0187657
Debaryomyces hansenii (Dha) dha651 DEHA0A14542g
Drosophila melanogaster (Dme) dme15058 CG7609-PA
(FBgn0027518)
Drosophila melanogaster (Dme) dme15059 CG7609-PB
(FBgn0027518)
Danio rerio (Dre) dre16431 ENSDARP00000008451
(LOC555003)
Danio rerio (Dre) dre8187 ENSDARP00000043169
Takifugu rubripes (Fru) fru16881 SINFRUP00000146163
Takifugu rubripes (Fru) fru16880 SINFRUP00000177085
Gallus gallus (Gga) gga6255 ENSGALP00000003853
(WDR24)		 Q5ZMV9
Homo sapiens (Hsa) hsa11374 ENSP00000248142
(WDR24)		 Q96S15-1
Homo sapiens (Hsa) hsa11375 ENSP00000293883
(WDR24)		 Q96S15-2
Kluyveromyces lactis (Kla) kla3897 KLLA0E21043g
Mus musculus (Mmu) mmu11178 ENSMUSP00000026833
(MGI:2446285)		 Q8CFJ9
Neurospora crassa (Ncr) ncr8413 NCU08632.2
Rattus norvegicus (Rno) rno4690 ENSRNOP00000026697
(RGD:1304803)		 Q4KM48
Saccharomyces cerevisiae (Sce) sce5696 YOL138C
(S000005498)
Schizosaccharomyces pombe (Spo) spo3312 SPAC4F8.11 O14186
Yarrowia lipolytica (Yli) yli1488 YALI0B17842g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000005498
GO:0005575 cellular_component C
ND
MmuMGI:2446285
GO:0005778 peroxisomal membrane C
NAS
SpoSPAC4F8.11
GO:0005829 cytosol C
IDA
SpoSPAC4F8.11
GO:0005840 ribosome C
IDA
SceS000005498
GO:0043234 protein complex C
NAS
SpoSPAC4F8.11
GO:0003674 molecular_function F
ND
MmuMGI:2446285
SceS000005498
SpoSPAC4F8.11
GO:0005053 peroxisome matrix targeting signal-2
binding		 F
ISS
DmeFBgn0027518
GO:0007031 peroxisome organization P
ISS
DmeFBgn0027518
GO:0008150 biological_process P
ND
MmuMGI:2446285
SceS000005498
SpoSPAC4F8.11

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC4F8.11
(O14186)		 YOL138C
(S000005498)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000005498
GO:0005778 peroxisomal membrane C
NAS
SpoSPAC4F8.11
GO:0005829 cytosol C
IDA
SpoSPAC4F8.11
GO:0005840 ribosome C
IDA
SceS000005498
GO:0043234 protein complex C
NAS
SpoSPAC4F8.11
GO:0003674 molecular_function F
ND
SceS000005498
SpoSPAC4F8.11
GO:0008150 biological_process P
ND
SceS000005498
SpoSPAC4F8.11

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