YOGY Home YOGY Help

Search term: YOR054C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name VHS3
SGD link S000005580
Alternative ID YOR054C
Description Negative regulatory subunit of protein phosphatase 1 Ppz1p and also a subunit of the phosphopantothenoylcysteine decarboxylase (PPCDC; Cab3p, Sis2p, Vhs3p) complex, which catalyzes the third step of coenzyme A biosynthesis
Synonyms YOR054C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0672 AC-HYP-

KOGs classification KOGs description
METABOLISMCELLULAR PROCESSES AND SIGNALING Halotolerance protein HAL3 (contains flavoprotein domain)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g48610 GI:15221911
Arabidopsis thaliana (Ath) At3g18030 GI:15229569
Caenorhabditis elegans (Cel) CE09663
(WBGene00009138)		 GI:17560194 P91988
Homo sapiens (Hsa) Hs21361900 GI:14042206 Q96CD2
Homo sapiens (Hsa) HsM11141897 GI:11141897
Saccharomyces cerevisiae (Sce) YKL088w
(S000001571)		 GI:6322762 P36076
Saccharomyces cerevisiae (Sce) YKR072c
(S000001780)		 GI:6322925 P36024
Saccharomyces cerevisiae (Sce) YOR054c
(S000005580)		 GI:6324629 Q08438
Schizosaccharomyces pombe (Spo) SPAC15E1.04_1 GI:19115217 Q9UTI7
Arabidopsis thaliana (Ath) At1g48610 GI:15221911
Arabidopsis thaliana (Ath) At3g18030 GI:15229569
Caenorhabditis elegans (Cel) CE09663
(WBGene00009138)		 GI:17560194 P91988
Homo sapiens (Hsa) Hs21361900 GI:14042206 Q96CD2
Homo sapiens (Hsa) HsM11141897 GI:11141897
Saccharomyces cerevisiae (Sce) YKL088w
(S000001571)		 GI:6322762 P36076
Saccharomyces cerevisiae (Sce) YKR072c
(S000001780)		 GI:6322925 P36024
Saccharomyces cerevisiae (Sce) YOR054c
(S000005580)		 GI:6324629 Q08438
Schizosaccharomyces pombe (Spo) SPAC15E1.04_1 GI:19115217 Q9UTI7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g48610
At3g18030
GO:0005634 nucleus C
IDA
SceS000001780
IPI
SceS000001780
GO:0005737 cytoplasm C
IC
SceS000001780
IDA
SceS000001571
IPI
SceS000001780
GO:0005829 cytosol C
IDA
SpoSPAC15E1.04
GO:0071513 phosphopantothenoylcysteine decarboxylase
complex		 C
IDA
SceS000005580
S000001571
S000001780
GO:0003677 DNA binding F
ISS
AthAt1g48610
GO:0004633 phosphopantothenoylcysteine decarboxylase
activity		 F
IDA
AthAt3g18030
SceS000001780
S000001571
S000005580
IMP
SceS000001780
S000001571
S000005580
ISS
SceS000001780
S000001571
S000005580
TAS
AthAt3g18030
GO:0004799 thymidylate synthase activity F
ISS
SpoSPAC15E1.04
GO:0004864 phosphoprotein phosphatase inhibitor
activity		 F
IDA
SceS000001780
S000005580
RCA
SceS000001571
GO:0010181 FMN binding F
ISS
AthAt3g18030
GO:0017076 purine nucleotide binding F
ISS
SceS000001571
GO:0019212 phosphatase inhibitor activity F
RCA
SceS000001571
GO:0050660 FAD binding F
ISS
SpoSPAC15E1.04
GO:0000003 reproduction P
IMP
CelWBGene00009138
GO:0002119 nematode larval development P
IMP
CelWBGene00009138
GO:0006231 dTMP biosynthetic process P
ISS
SpoSPAC15E1.04
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00009138
GO:0007346 regulation of mitotic cell cycle P
IGI
SceS000001780
GO:0008150 biological_process P
ND
AthAt1g48610
GO:0009651 response to salt stress P
IGI
SceS000001780
S000001571
IMP
SceS000001780
GO:0015937 coenzyme A biosynthetic process P
IGI
SceS000001571
ISS
SceS000001780
S000001571
S000005580
TAS
AthAt3g18030
GO:0030004 cellular monovalent inorganic cation
homeostasis		 P
IGI
SceS000005580
IPI
SceS000005580
GO:0032259 methylation P
ISS
SpoSPAC15E1.04
GO:0040007 growth P
IMP
CelWBGene00009138
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00009138
GO:0042538 hyperosmotic salinity response P
IEP
AthAt3g18030
IMP
AthAt3g18030

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40247

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) VHS3
(S000005580)		 GI:6324629 Q08438
Kluyveromyces lactis (Kla) KLLA0F16258g GI:50311575
Eremothecium gossypii (Ego) AGOS_AAR140W GI:45184964


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0071513 phosphopantothenoylcysteine decarboxylase
complex		 C
IDA
SceS000005580
GO:0004633 phosphopantothenoylcysteine decarboxylase
activity		 F
IDA
SceS000005580
IMP
SceS000005580
ISS
SceS000005580
GO:0004864 phosphoprotein phosphatase inhibitor
activity		 F
IDA
SceS000005580
GO:0015937 coenzyme A biosynthetic process P
ISS
SceS000005580
GO:0030004 cellular monovalent inorganic cation
homeostasis		 P
IGI
SceS000005580
IPI
SceS000005580

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17619

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago327 AAR140W
Candida glabrata (Cgl) cgl1708 CAGL0G01969g
Candida glabrata (Cgl) cgl4520 CAGL0L10208g
Debaryomyces hansenii (Dha) dha3084 DEHA0D17479g
Kluyveromyces lactis (Kla) kla4812 KLLA0F16258g
Saccharomyces cerevisiae (Sce) sce5788 YOR054C
(S000005580)
Yarrowia lipolytica (Yli) yli1972 YALI0C06281g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0071513 phosphopantothenoylcysteine decarboxylase
complex		 C
IDA
SceS000005580
GO:0004633 phosphopantothenoylcysteine decarboxylase
activity		 F
IDA
SceS000005580
IMP
SceS000005580
ISS
SceS000005580
GO:0004864 phosphoprotein phosphatase inhibitor
activity		 F
IDA
SceS000005580
GO:0015937 coenzyme A biosynthetic process P
ISS
SceS000005580
GO:0030004 cellular monovalent inorganic cation
homeostasis		 P
IGI
SceS000005580
IPI
SceS000005580

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk