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Search term: YOR098C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP1
SGD link S000005624
Alternative ID YOR098C
Description Nuclear pore complex (NPC) subunit, involved in protein import/export and in export of RNAs, possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; potential Cdc28p substrate
Synonyms YOR098C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4719 --DHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING Nuclear pore complex protein

Species KOG link NCBI link UniProt link
Drosophila melanogaster (Dme) 7293246 GI:7293246
Homo sapiens (Hsa) Hs4826872 GI:4826872
Saccharomyces cerevisiae (Sce) YJL041w_1 GI:6322420 P14907
Saccharomyces cerevisiae (Sce) YLR335w_1 GI:6323367 P32499
Saccharomyces cerevisiae (Sce) YOR098c
(S000005624)		 GI:6324672 P20676
Schizosaccharomyces pombe (Spo) SPAC30D11.04c GI:19114125 Q09904


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPAC30D11.04c
GO:0005643 nuclear pore C
IDA
SceS000005624
TAS
SpoSPAC30D11.04c
GO:0005198 structural molecule activity F
TAS
SceS000005624
GO:0005515 protein binding F
IPI
SceS000005624
SpoSPAC30D11.04c
GO:0000054 ribosomal subunit export from nucleus P
ISS
SpoSPAC30D11.04c
RCA
SceS000005624
GO:0006405 RNA export from nucleus P
IMP
SceS000005624
GO:0006406 mRNA export from nucleus P
IMP
SceS000005624
GO:0006407 rRNA export from nucleus P
TAS
SceS000005624
GO:0006408 snRNA export from nucleus P
TAS
SceS000005624
GO:0006409 tRNA export from nucleus P
TAS
SceS000005624
GO:0006461 protein complex assembly P
RCA
SceS000005624
GO:0006606 protein import into nucleus P
IMP
SceS000005624
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000005624
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000005624
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000005624
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000005624
GO:0006611 protein export from nucleus P
TAS
SceS000005624
GO:0006913 nucleocytoplasmic transport P
RCA
SceS000005624
GO:0006998 nuclear envelope organization P
IMP
SceS000005624
GO:0006999 nuclear pore organization P
TAS
SceS000005624
GO:0032197 transposition, RNA-mediated P
IMP
SpoSPAC30D11.04c
GO:0045184 establishment of protein localization P
RCA
SceS000005624
GO:0051169 nuclear transport P
RCA
SceS000005624
GO:0051170 nuclear import P
IMP
SpoSPAC30D11.04c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68931

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NUP1
(S000005624)		 GI:6324672 P20676
Kluyveromyces lactis (Kla) KLLA0C13475g GI:50305681
Eremothecium gossypii (Ego) AGOS_ACL075C GI:45185613


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000005624
GO:0005198 structural molecule activity F
TAS
SceS000005624
GO:0005515 protein binding F
IPI
SceS000005624
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000005624
GO:0006405 RNA export from nucleus P
IMP
SceS000005624
GO:0006406 mRNA export from nucleus P
IMP
SceS000005624
GO:0006407 rRNA export from nucleus P
TAS
SceS000005624
GO:0006408 snRNA export from nucleus P
TAS
SceS000005624
GO:0006409 tRNA export from nucleus P
TAS
SceS000005624
GO:0006461 protein complex assembly P
RCA
SceS000005624
GO:0006606 protein import into nucleus P
IMP
SceS000005624
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000005624
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000005624
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000005624
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000005624
GO:0006611 protein export from nucleus P
TAS
SceS000005624
GO:0006913 nucleocytoplasmic transport P
RCA
SceS000005624
GO:0006998 nuclear envelope organization P
IMP
SceS000005624
GO:0006999 nuclear pore organization P
TAS
SceS000005624
GO:0045184 establishment of protein localization P
RCA
SceS000005624
GO:0051169 nuclear transport P
RCA
SceS000005624

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_29444

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Saccharomyces cerevisiae (Sce) sce5834 YOR098C
(S000005624)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000005624
GO:0005198 structural molecule activity F
TAS
SceS000005624
GO:0005515 protein binding F
IPI
SceS000005624
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000005624
GO:0006405 RNA export from nucleus P
IMP
SceS000005624
GO:0006406 mRNA export from nucleus P
IMP
SceS000005624
GO:0006407 rRNA export from nucleus P
TAS
SceS000005624
GO:0006408 snRNA export from nucleus P
TAS
SceS000005624
GO:0006409 tRNA export from nucleus P
TAS
SceS000005624
GO:0006461 protein complex assembly P
RCA
SceS000005624
GO:0006606 protein import into nucleus P
IMP
SceS000005624
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000005624
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000005624
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000005624
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000005624
GO:0006611 protein export from nucleus P
TAS
SceS000005624
GO:0006913 nucleocytoplasmic transport P
RCA
SceS000005624
GO:0006998 nuclear envelope organization P
IMP
SceS000005624
GO:0006999 nuclear pore organization P
TAS
SceS000005624
GO:0045184 establishment of protein localization P
RCA
SceS000005624
GO:0051169 nuclear transport P
RCA
SceS000005624

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC30D11.04c
(Q09904)		 YOR098C
(S000005624)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPAC30D11.04c
GO:0005643 nuclear pore C
IDA
SceS000005624
TAS
SpoSPAC30D11.04c
GO:0005198 structural molecule activity F
TAS
SceS000005624
GO:0005515 protein binding F
IPI
SceS000005624
SpoSPAC30D11.04c
GO:0000054 ribosomal subunit export from nucleus P
ISS
SpoSPAC30D11.04c
RCA
SceS000005624
GO:0006405 RNA export from nucleus P
IMP
SceS000005624
GO:0006406 mRNA export from nucleus P
IMP
SceS000005624
GO:0006407 rRNA export from nucleus P
TAS
SceS000005624
GO:0006408 snRNA export from nucleus P
TAS
SceS000005624
GO:0006409 tRNA export from nucleus P
TAS
SceS000005624
GO:0006461 protein complex assembly P
RCA
SceS000005624
GO:0006606 protein import into nucleus P
IMP
SceS000005624
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000005624
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000005624
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000005624
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000005624
GO:0006611 protein export from nucleus P
TAS
SceS000005624
GO:0006913 nucleocytoplasmic transport P
RCA
SceS000005624
GO:0006998 nuclear envelope organization P
IMP
SceS000005624
GO:0006999 nuclear pore organization P
TAS
SceS000005624
GO:0032197 transposition, RNA-mediated P
IMP
SpoSPAC30D11.04c
GO:0045184 establishment of protein localization P
RCA
SceS000005624
GO:0051169 nuclear transport P
RCA
SceS000005624
GO:0051170 nuclear import P
IMP
SpoSPAC30D11.04c

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GO info in one table:

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