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Search term: YOR142W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name LSC1
SGD link S000005668
Alternative ID YOR142W
Description Alpha subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate; phosphorylated
Synonyms YOR142W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1255 ACDHYP-

KOGs classification KOGs description
METABOLISM Succinyl-CoA synthetase, alpha subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g08300 GI:15241592
Arabidopsis thaliana (Ath) At5g23250 GI:15237260
Caenorhabditis elegans (Cel) CE05227
(WBGene00007350)		 GI:17550194 P53596
Caenorhabditis elegans (Cel) CE09611
(WBGene00017759)		 GI:17553126 O02642
Drosophila melanogaster (Dme) 7292391 GI:12644470
Drosophila melanogaster (Dme) 7300518 GI:7300518
Homo sapiens (Hsa) Hs11321581 GI:11321581
Saccharomyces cerevisiae (Sce) YOR142w
(S000005668)		 GI:6324716 P53598
Schizosaccharomyces pombe (Spo) SPAC16E8.17c GI:19115142 O13750
Arabidopsis thaliana (Ath) At5g08300 GI:15241592
Arabidopsis thaliana (Ath) At5g23250 GI:15237260
Caenorhabditis elegans (Cel) CE05227
(WBGene00007350)		 GI:17550194 P53596
Caenorhabditis elegans (Cel) CE09611
(WBGene00017759)		 GI:17553126 O02642
Drosophila melanogaster (Dme) 7292391 GI:12644470
Drosophila melanogaster (Dme) 7300518 GI:7300518
Homo sapiens (Hsa) Hs11321581 GI:11321581
Saccharomyces cerevisiae (Sce) YOR142w
(S000005668)		 GI:6324716 P53598
Schizosaccharomyces pombe (Spo) SPAC16E8.17c GI:19115142 O13750


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt5g08300
GO:0005739 mitochondrion C
IDA
AthAt5g08300
At5g23250
SceS000005668
SpoSPAC16E8.17c
ISS
SpoSPAC16E8.17c
GO:0042645 mitochondrial nucleoid C
IDA
SceS000005668
GO:0042709 succinate-CoA ligase complex C
IC
SpoSPAC16E8.17c
GO:0004774 succinate-CoA ligase activity F
ISS
SpoSPAC16E8.17c
GO:0004775 succinate-CoA ligase (ADP-forming)
activity		 F
IDA
SceS000005668
IMP
SceS000005668
ISS
SceS000005668
GO:0004776 succinate-CoA ligase (GDP-forming)
activity		 F
ISS
AthAt5g23250
At5g08300
GO:0005507 copper ion binding F
IDA
AthAt5g08300
At5g23250
GO:0046872 metal ion binding F
IDA
AthAt5g08300
GO:0006099 tricarboxylic acid cycle P
ISS
SpoSPAC16E8.17c
TAS
SceS000005668
GO:0006104 succinyl-CoA metabolic process P
IDA
SceS000005668
ISS
SpoSPAC16E8.17c
TAS
SceS000005668
GO:0008152 metabolic process P
ISS
AthAt5g23250
At5g08300
GO:0046686 response to cadmium ion P
IEP
AthAt5g08300
GO:0055114 oxidation reduction P
RCA
SceS000005668

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
55785

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) SUCLG1 GI:109452591
Pan troglodytes (Ptr) SUCLG1 GI:114578451
Canis familiaris (Cfa) SUCLG1 GI:73980931
Mus musculus (Mmu) Suclg1
(MGI:1927234)		 GI:9845299 Q9WUM5
Rattus norvegicus (Rno) Suclg1
(RGD:619821)		 GI:16758586
Gallus gallus (Gga) SUCLG1 GI:61097981
Drosophila melanogaster (Dme) Scsalpha GI:28574296
Anopheles gambiae (Aga) AgaP_AGAP001312 GI:58396343
Caenorhabditis elegans (Cel) F23H11.3
(CE09611;
WBGene00017759)		 GI:17553126 O02642
Caenorhabditis elegans (Cel) C05G5.4
(CE05227;
WBGene00007350)		 GI:17550194 P53596
Schizosaccharomyces pombe (Spo) SPAC16E8.17c GI:19115142 O13750
Saccharomyces cerevisiae (Sce) LSC1
(S000005668)		 GI:6324716 P53598
Kluyveromyces lactis (Kla) KLLA0E03168g GI:50308181
Eremothecium gossypii (Ego) AGOS_AFR134C GI:45198652
Magnaporthe grisea (Mgr) MGG_05480 GI:39941136
Neurospora crassa (Ncr) NCU01227.1 GI:32412480
Arabidopsis thaliana (Ath) AT5G23250 GI:15237260
Arabidopsis thaliana (Ath) AT5G08300 GI:15241592
Oryza sativa (Osa) Os07g0577700 GI:115472985
Plasmodium falciparum (Pfa) PF11_0097 GI:124803619


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt5g08300
GO:0005739 mitochondrion C
IDA
AthAt5g08300
At5g23250
MmuMGI:1927234
SceS000005668
SpoSPAC16E8.17c
ISO
MmuMGI:1927234
ISS
SpoSPAC16E8.17c
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1927234
GO:0042645 mitochondrial nucleoid C
IDA
SceS000005668
GO:0042709 succinate-CoA ligase complex C
IC
SpoSPAC16E8.17c
GO:0045244 succinate-CoA ligase complex (GDP-forming) C
ISO
MmuMGI:1927234
ISS
DmeScsalpha
PfaPF11_0097
NAS
DmeScsalpha
GO:0004774 succinate-CoA ligase activity F
ISS
SpoSPAC16E8.17c
GO:0004775 succinate-CoA ligase (ADP-forming)
activity		 F
IDA
SceS000005668
IMP
SceS000005668
ISO
MmuMGI:1927234
ISS
SceS000005668
GO:0004776 succinate-CoA ligase (GDP-forming)
activity		 F
ISO
MmuMGI:1927234
ISS
AthAt5g23250
At5g08300
DmeScsalpha
PfaPF11_0097
NAS
DmeScsalpha
GO:0005507 copper ion binding F
IDA
AthAt5g08300
At5g23250
GO:0019003 GDP binding F
ISO
MmuMGI:1927234
GO:0046872 metal ion binding F
IDA
AthAt5g08300
GO:0046982 protein heterodimerization activity F
ISO
MmuMGI:1927234
GO:0006099 tricarboxylic acid cycle P
ISO
MmuMGI:1927234
ISS
DmeScsalpha
PfaPF11_0097
SpoSPAC16E8.17c
NAS
DmeScsalpha
TAS
SceS000005668
GO:0006104 succinyl-CoA metabolic process P
IDA
SceS000005668
ISO
MmuMGI:1927234
ISS
PfaPF11_0097
SpoSPAC16E8.17c
TAS
SceS000005668
GO:0006105 succinate metabolic process P
ISO
MmuMGI:1927234
GO:0008152 metabolic process P
ISS
AthAt5g23250
At5g08300
GO:0046686 response to cadmium ion P
IEP
AthAt5g08300
GO:0055114 oxidation reduction P
RCA
SceS000005668

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1076

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3387 ENSANGP00000020396
Ashbya gossypii (Ago) ago3326 AFR134C
Arabidopsis thaliana (Ath) ath23047 At5g08300.1
Arabidopsis thaliana (Ath) ath24569 At5g23250.1
Caenorhabditis elegans (Cel) cel1201 C05G5.4
(CE05227;
WBGene00007350)
Caenorhabditis elegans (Cel) cel7152 F23H11.3
(CE09611;
WBGene00017759)
Candida glabrata (Cgl) cgl2831 CAGL0I07139g
Cryptococcus neoformans (Cne) cne4299 177.m03054
Dictyostelium discoideum (Ddi) ddi13299 DDB0191520
Debaryomyces hansenii (Dha) dha6200 DEHA0G11264g
Drosophila melanogaster (Dme) dme7831 CG1065-PA
(FBgn0004888)
Drosophila melanogaster (Dme) dme13377 CG6255-PA
(FBgn0038708)
Danio rerio (Dre) dre27560 ENSDARP00000005900
Escherichia coli (Eco) eco707 16128704
Takifugu rubripes (Fru) fru21255 SINFRUP00000145516
Gallus gallus (Gga) gga18482 ENSGALP00000025674
Homo sapiens (Hsa) hsa18083 ENSP00000295783
(SUCLG1)		 Q6IAL5
Kluyveromyces lactis (Kla) kla3090 KLLA0E03168g
Mus musculus (Mmu) mmu22134 ENSMUSP00000065113
(MGI:1927234)		 Q9WUM5
Neurospora crassa (Ncr) ncr1190 NCU01227.2
Oryza sativa (Osa) osa80068 8150.m00116
Plasmodium falciparum (Pfa) pfa1045 PF11_0097
Rattus norvegicus (Rno) rno21643 ENSRNOP00000007624
(RGD:619821)		 P13086
Saccharomyces cerevisiae (Sce) sce5879 YOR142W
(S000005668)
Schizosaccharomyces pombe (Spo) spo2706 SPAC16E8.17c O13750
Yarrowia lipolytica (Yli) yli4855 YALI0E24013g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt5g08300
GO:0005739 mitochondrion C
IDA
AthAt5g08300
At5g23250
MmuMGI:1927234
SceS000005668
SpoSPAC16E8.17c
ISO
MmuMGI:1927234
ISS
SpoSPAC16E8.17c
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1927234
GO:0042645 mitochondrial nucleoid C
IDA
SceS000005668
GO:0042709 succinate-CoA ligase complex C
IC
SpoSPAC16E8.17c
GO:0045244 succinate-CoA ligase complex (GDP-forming) C
ISO
MmuMGI:1927234
ISS
DmeFBgn0004888
FBgn0038708
PfaPF11_0097
NAS
DmeFBgn0004888
GO:0004774 succinate-CoA ligase activity F
ISS
SpoSPAC16E8.17c
GO:0004775 succinate-CoA ligase (ADP-forming)
activity		 F
IDA
SceS000005668
IMP
SceS000005668
ISO
MmuMGI:1927234
ISS
SceS000005668
GO:0004776 succinate-CoA ligase (GDP-forming)
activity		 F
ISO
MmuMGI:1927234
ISS
AthAt5g23250
At5g08300
DmeFBgn0038708
FBgn0004888
PfaPF11_0097
NAS
DmeFBgn0004888
GO:0005507 copper ion binding F
IDA
AthAt5g08300
At5g23250
GO:0019003 GDP binding F
ISO
MmuMGI:1927234
GO:0046872 metal ion binding F
IDA
AthAt5g08300
GO:0046982 protein heterodimerization activity F
ISO
MmuMGI:1927234
GO:0006099 tricarboxylic acid cycle P
ISO
MmuMGI:1927234
ISS
DmeFBgn0004888
PfaPF11_0097
SpoSPAC16E8.17c
NAS
DmeFBgn0004888
TAS
SceS000005668
GO:0006104 succinyl-CoA metabolic process P
IDA
SceS000005668
ISO
MmuMGI:1927234
ISS
PfaPF11_0097
SpoSPAC16E8.17c
TAS
SceS000005668
GO:0006105 succinate metabolic process P
ISO
MmuMGI:1927234
GO:0008152 metabolic process P
ISS
AthAt5g23250
At5g08300
GO:0046686 response to cadmium ion P
IEP
AthAt5g08300
GO:0055114 oxidation reduction P
RCA
SceS000005668

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC16E8.17c
(O13750)		 YOR142W
(S000005668)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000005668
SpoSPAC16E8.17c
ISS
SpoSPAC16E8.17c
GO:0042645 mitochondrial nucleoid C
IDA
SceS000005668
GO:0042709 succinate-CoA ligase complex C
IC
SpoSPAC16E8.17c
GO:0004774 succinate-CoA ligase activity F
ISS
SpoSPAC16E8.17c
GO:0004775 succinate-CoA ligase (ADP-forming)
activity		 F
IDA
SceS000005668
IMP
SceS000005668
ISS
SceS000005668
GO:0006099 tricarboxylic acid cycle P
ISS
SpoSPAC16E8.17c
TAS
SceS000005668
GO:0006104 succinyl-CoA metabolic process P
IDA
SceS000005668
ISS
SpoSPAC16E8.17c
TAS
SceS000005668
GO:0055114 oxidation reduction P
RCA
SceS000005668

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GO info in one table:

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