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Search term: YOR165W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SEY1
SGD link S000005691
Alternative ID YOR165W
Description GTPase with a role in ER morphology; interacts physically and genetically with Yop1p and Rtn1p; possible functional ortholog of mammalian atlastins, defects in which cause a form of hereditary spastic paraplegia; homolog of Arabidopsis RHD3
Synonyms YOR165W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2203 A---YP-

KOGs classification KOGs description
POORLY CHARACTERIZED GTP-binding protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g72960 GI:15219333
Arabidopsis thaliana (Ath) At3g13870 GI:15231390
Arabidopsis thaliana (Ath) At5g45160 GI:15242330
Saccharomyces cerevisiae (Sce) YOR165w
(S000005691)		 GI:6324739 Q99287
Schizosaccharomyces pombe (Spo) SPAC222.14c GI:19114065 Q9UTE0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g72960
GO:0005737 cytoplasm C
IDA
AthAt3g13870
SceS000005691
SpoSPAC222.14c
ISS
SpoSPAC222.14c
GO:0005783 endoplasmic reticulum C
IDA
AthAt5g45160
At3g13870
SceS000005691
GO:0005829 cytosol C
IDA
SpoSPAC222.14c
GO:0005886 plasma membrane C
IDA
AthAt3g13870
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000005691
GO:0000166 nucleotide binding F
ISS
AthAt1g72960
GO:0003924 GTPase activity F
IMP
SceS000005691
GO:0005525 GTP binding F
ISS
AthAt5g45160
At3g13870
SpoSPAC222.14c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
AthAt3g13870
GO:0007029 endoplasmic reticulum organization P
IGI
SceS000005691
GO:0009832 plant-type cell wall biogenesis P
IMP
AthAt3g13870
GO:0009932 cell tip growth P
IMP
AthAt3g13870
GO:0010053 root epidermal cell differentiation P
IMP
AthAt3g13870
GO:0016044 cellular membrane organization P
IGI
SceS000005691
ISS
SpoSPAC222.14c
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC222.14c
GO:0030036 actin cytoskeleton organization P
IMP
AthAt3g13870

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6968

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC222.14c GI:19114065 Q9UTE0
Saccharomyces cerevisiae (Sce) SEY1
(S000005691)		 GI:6324739 Q99287
Kluyveromyces lactis (Kla) KLLA0F20317g GI:50311921
Eremothecium gossypii (Ego) AGOS_AGR264C GI:45201360
Magnaporthe grisea (Mgr) MGG_06979 GI:39978189
Neurospora crassa (Ncr) NCU09610.1 GI:32419633
Arabidopsis thaliana (Ath) RHD3 GI:15231390
Arabidopsis thaliana (Ath) AT1G72960 GI:15219333
Oryza sativa (Osa) Os01g0575000 GI:115437816


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g72960
GO:0005737 cytoplasm C
IDA
AthRHD3
SceS000005691
SpoSPAC222.14c
ISS
SpoSPAC222.14c
GO:0005783 endoplasmic reticulum C
IDA
AthRHD3
SceS000005691
GO:0005829 cytosol C
IDA
SpoSPAC222.14c
GO:0005886 plasma membrane C
IDA
AthRHD3
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000005691
GO:0000166 nucleotide binding F
ISS
AthAt1g72960
GO:0003924 GTPase activity F
IMP
SceS000005691
GO:0005525 GTP binding F
ISS
AthRHD3
SpoSPAC222.14c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
AthRHD3
GO:0007029 endoplasmic reticulum organization P
IGI
SceS000005691
GO:0009832 plant-type cell wall biogenesis P
IMP
AthRHD3
GO:0009932 cell tip growth P
IMP
AthRHD3
GO:0010053 root epidermal cell differentiation P
IMP
AthRHD3
GO:0016044 cellular membrane organization P
IGI
SceS000005691
ISS
SpoSPAC222.14c
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC222.14c
GO:0030036 actin cytoskeleton organization P
IMP
AthRHD3

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3358

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4575 AGR264C
Arabidopsis thaliana (Ath) ath6588 At1g72960.1
Arabidopsis thaliana (Ath) ath13573 At3g13870.1
Arabidopsis thaliana (Ath) ath13574 At3g13870.2
Arabidopsis thaliana (Ath) ath26360 At5g45160.1
Candida glabrata (Cgl) cgl4273 CAGL0L04466g
Dictyostelium discoideum (Ddi) ddi6510 DDB0206311
Debaryomyces hansenii (Dha) dha5552 DEHA0F26114g
Kluyveromyces lactis (Kla) kla4992 KLLA0F20317g
Neurospora crassa (Ncr) ncr9355 NCU09610.2
Oryza sativa (Osa) osa14023 2879.m00107
Oryza sativa (Osa) osa14043 2879.m00150
Oryza sativa (Osa) osa62814 6512.m00161
Oryza sativa (Osa) osa66640 6933.m00125
Plasmodium falciparum (Pfa) pfa1522 PF14_0159
Saccharomyces cerevisiae (Sce) sce5907 YOR165W
(S000005691)
Schizosaccharomyces pombe (Spo) spo1749 SPAC222.14c Q9UTE0
Yarrowia lipolytica (Yli) yli5383 YALI0F01166g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g72960
GO:0005737 cytoplasm C
IDA
AthAt3g13870
SceS000005691
SpoSPAC222.14c
ISS
SpoSPAC222.14c
GO:0005783 endoplasmic reticulum C
IDA
AthAt5g45160
At3g13870
SceS000005691
GO:0005829 cytosol C
IDA
SpoSPAC222.14c
GO:0005886 plasma membrane C
IDA
AthAt3g13870
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000005691
GO:0000166 nucleotide binding F
ISS
AthAt1g72960
GO:0003674 molecular_function F
ND
PfaPF14_0159
GO:0003924 GTPase activity F
IMP
SceS000005691
GO:0005525 GTP binding F
ISS
AthAt5g45160
At3g13870
SpoSPAC222.14c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
AthAt3g13870
GO:0007029 endoplasmic reticulum organization P
IGI
SceS000005691
GO:0008150 biological_process P
ND
PfaPF14_0159
GO:0009832 plant-type cell wall biogenesis P
IMP
AthAt3g13870
GO:0009932 cell tip growth P
IMP
AthAt3g13870
GO:0010053 root epidermal cell differentiation P
IMP
AthAt3g13870
GO:0016044 cellular membrane organization P
IGI
SceS000005691
ISS
SpoSPAC222.14c
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC222.14c
GO:0030036 actin cytoskeleton organization P
IMP
AthAt3g13870

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC222.14c
(Q9UTE0)		 YOR165W
(S000005691)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000005691
SpoSPAC222.14c
ISS
SpoSPAC222.14c
GO:0005783 endoplasmic reticulum C
IDA
SceS000005691
GO:0005829 cytosol C
IDA
SpoSPAC222.14c
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000005691
GO:0003924 GTPase activity F
IMP
SceS000005691
GO:0005525 GTP binding F
ISS
SpoSPAC222.14c
GO:0007029 endoplasmic reticulum organization P
IGI
SceS000005691
GO:0016044 cellular membrane organization P
IGI
SceS000005691
ISS
SpoSPAC222.14c
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC222.14c

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GO info in one table:

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