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Search term: YOR224C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPB8
SGD link S000005750
Alternative ID YOR224C
Description RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III
Synonyms YOR224C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3400 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNA polymerase subunit 8

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g54250 GI:15221759
Arabidopsis thaliana (Ath) At3g59600 GI:15231714
Caenorhabditis elegans (Cel) CE04448
(WBGene00017830)		 GI:17553210 Q19826
Drosophila melanogaster (Dme) 7296484 GI:7296484
Homo sapiens (Hsa) Hs14589953
(POLR2H)		 GI:14589953 P52434
Saccharomyces cerevisiae (Sce) YOR224c
(S000005750)		 GI:6324798 P20436
Schizosaccharomyces pombe (Spo) SPBC14C8.12 GI:19112707 Q92399
Encephalitozoon cuniculi (Ecu) ECU07g0840 GI:19074506 Q8SRJ5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaPOLR2H
SpoSPBC14C8.12
GO:0005654 nucleoplasm C
EXP
HsaPOLR2H
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
IDA
HsaPOLR2H
SceS000005750
IPI
AthAt3g59600
At1g54250
GO:0005666 DNA-directed RNA polymerase III
complex		 C
IDA
SceS000005750
SpoSPBC14C8.12
TAS
SceS000005750
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
SceS000005750
SpoSPBC14C8.12
GO:0005829 cytosol C
IDA
SpoSPBC14C8.12
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
IDA
SpoSPBC14C8.12
GO:0003899 DNA-directed RNA polymerase activity F
IC
SceS000005750
IDA
SceS000005750
ISS
AthAt3g59600
At1g54250
SpoSPBC14C8.12
NAS
HsaPOLR2H
GO:0004672 protein kinase activity F
IDA
HsaPOLR2H
GO:0005515 protein binding F
IPI
HsaPOLR2H
SpoSPBC14C8.12
GO:0008270 zinc ion binding F
NAS
HsaPOLR2H
GO:0000003 reproduction P
IMP
CelWBGene00017830
GO:0002119 nematode larval development P
IMP
CelWBGene00017830
GO:0006350 transcription P
ISS
AthAt1g54250
At3g59600
GO:0006360 transcription from RNA polymerase I
promoter		 P
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006366 transcription from RNA polymerase II
promoter		 P
IDA
HsaPOLR2H
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
EXP
HsaPOLR2H
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
EXP
HsaPOLR2H
GO:0006383 transcription from RNA polymerase III
promoter		 P
IGI
SceS000005750
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00017830
GO:0008380 RNA splicing P
EXP
HsaPOLR2H
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017830
GO:0040007 growth P
IMP
CelWBGene00017830
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00017830
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00017830
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00017830
GO:0040039 inductive cell migration P
IMP
CelWBGene00017830
GO:0042797 tRNA transcription from RNA polymerase III
promoter		 P
IDA
SceS000005750

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4540

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) POLR2H GI:14589953 P52434
Pan troglodytes (Ptr) POLR2H GI:114590780
Canis familiaris (Cfa) POLR2H GI:57109920
Mus musculus (Mmu) Polr2h
(MGI:2384309)		 GI:21704118 Q923G2
Rattus norvegicus (Rno) Polr2hl GI:109489487
Rattus norvegicus (Rno) Polr2h GI:62658151
Gallus gallus (Gga) POLR2H GI:50752375
Drosophila melanogaster (Dme) Rpb8
(FBgn0037121)		 GI:21358365
Anopheles gambiae (Aga) AgaP_AGAP012397 GI:58393552
Caenorhabditis elegans (Cel) rpb-8
(CE04448;
WBGene00017830)		 GI:17553210 Q19826
Saccharomyces cerevisiae (Sce) RPB8
(S000005750)		 GI:6324798 P20436
Kluyveromyces lactis (Kla) KLLA0D07139g GI:50306807
Eremothecium gossypii (Ego) AGOS_ACR111C GI:45185797
Magnaporthe grisea (Mgr) MGG_07080 GI:39971529
Neurospora crassa (Ncr) NCU08030.1 GI:32416516
Arabidopsis thaliana (Ath) NRPB8A GI:15221759
Arabidopsis thaliana (Ath) NRPB8B GI:15231714
Oryza sativa (Osa) Os03g0845700 GI:115456559


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2384309
GO:0005634 nucleus C
IDA
HsaPOLR2H
GO:0005654 nucleoplasm C
EXP
HsaPOLR2H
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
IDA
HsaPOLR2H
SceS000005750
IPI
AthNRPB8B
NRPB8A
ISS
DmeFBgn0037121
GO:0005666 DNA-directed RNA polymerase III
complex		 C
IDA
SceS000005750
TAS
SceS000005750
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
SceS000005750
GO:0003674 molecular_function F
ND
MmuMGI:2384309
GO:0003899 DNA-directed RNA polymerase activity F
IC
SceS000005750
IDA
SceS000005750
ISS
AthNRPB8B
NRPB8A
DmeFBgn0037121
NAS
HsaPOLR2H
GO:0004672 protein kinase activity F
IDA
HsaPOLR2H
GO:0005515 protein binding F
IPI
HsaPOLR2H
GO:0008270 zinc ion binding F
NAS
HsaPOLR2H
GO:0000003 reproduction P
IMP
CelWBGene00017830
GO:0002119 nematode larval development P
IMP
CelWBGene00017830
GO:0006350 transcription P
ISS
AthNRPB8A
NRPB8B
GO:0006360 transcription from RNA polymerase I
promoter		 P
IPI
SceS000005750
GO:0006366 transcription from RNA polymerase II
promoter		 P
IDA
HsaPOLR2H
IPI
SceS000005750
ISS
DmeFBgn0037121
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
EXP
HsaPOLR2H
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
EXP
HsaPOLR2H
GO:0006383 transcription from RNA polymerase III
promoter		 P
IGI
SceS000005750
IPI
SceS000005750
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00017830
GO:0008150 biological_process P
ND
MmuMGI:2384309
GO:0008380 RNA splicing P
EXP
HsaPOLR2H
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017830
GO:0040007 growth P
IMP
CelWBGene00017830
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00017830
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00017830
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00017830
GO:0040039 inductive cell migration P
IMP
CelWBGene00017830
GO:0042797 tRNA transcription from RNA polymerase III
promoter		 P
IDA
SceS000005750

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1892

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga9603 ENSANGP00000011232
Ashbya gossypii (Ago) ago1158 ACR111C
Arabidopsis thaliana (Ath) ath4737 At1g54250.1
Arabidopsis thaliana (Ath) ath17379 At3g59600.1
Caenorhabditis elegans (Cel) cel7411 F26F4.11
(CE04448;
WBGene00017830)
Candida glabrata (Cgl) cgl3165 CAGL0J04070g
Cryptococcus neoformans (Cne) cne285 162.m02807
Dictyostelium discoideum (Ddi) ddi12626 DDB0216297
Drosophila melanogaster (Dme) dme10652 CG11246-PA
(FBgn0037121)
Takifugu rubripes (Fru) fru24185 SINFRUP00000161322
Gallus gallus (Gga) gga23606 ENSGALP00000013891
(POLR2H)
Homo sapiens (Hsa) hsa23559 ENSP00000296223
(POLR2H)		 P52434
Kluyveromyces lactis (Kla) kla2378 KLLA0D07139g
Mus musculus (Mmu) mmu10093 ENSMUSP00000021405
(MGI:2384309)		 Q923G2
Neurospora crassa (Ncr) ncr7822 NCU08030.2
Oryza sativa (Osa) osa20996 3578.m00169
Oryza sativa (Osa) osa41512 5129.m00161
Oryza sativa (Osa) osa41552 5129.m00219
Oryza sativa (Osa) osa64596 6711.m00154
Oryza sativa (Osa) osa87055 9222.m00169
Oryza sativa (Osa) osa88136 9541.m00206
Plasmodium falciparum (Pfa) pfa4919 PFL0665c
Rattus norvegicus (Rno) rno7592 ENSRNOP00000002382
(RGD:1306329)		 Q9Z0W2
Rattus norvegicus (Rno) rno6535 ENSRNOP00000039914
Saccharomyces cerevisiae (Sce) sce5970 YOR224C
(S000005750)
Schizosaccharomyces pombe (Spo) spo1755 SPBC14C8.12 Q92399
Yarrowia lipolytica (Yli) yli5740 YALI0F09383g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2384309
PfaPFL0665c
GO:0005634 nucleus C
IDA
SpoSPBC14C8.12
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
IDA
SceS000005750
IPI
AthAt3g59600
At1g54250
ISS
DmeFBgn0037121
GO:0005666 DNA-directed RNA polymerase III
complex		 C
IDA
SceS000005750
SpoSPBC14C8.12
TAS
SceS000005750
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
SceS000005750
SpoSPBC14C8.12
GO:0005829 cytosol C
IDA
SpoSPBC14C8.12
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
IDA
SpoSPBC14C8.12
GO:0003674 molecular_function F
ND
MmuMGI:2384309
GO:0003899 DNA-directed RNA polymerase activity F
IC
SceS000005750
IDA
SceS000005750
ISS
AthAt3g59600
At1g54250
DmeFBgn0037121
PfaPFL0665c
SpoSPBC14C8.12
GO:0005515 protein binding F
IPI
SpoSPBC14C8.12
GO:0000003 reproduction P
IMP
CelWBGene00017830
GO:0002119 nematode larval development P
IMP
CelWBGene00017830
GO:0006350 transcription P
ISS
AthAt1g54250
At3g59600
GO:0006352 transcription initiation P
ISS
PfaPFL0665c
GO:0006360 transcription from RNA polymerase I
promoter		 P
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006366 transcription from RNA polymerase II
promoter		 P
IPI
SceS000005750
ISS
DmeFBgn0037121
TAS
SpoSPBC14C8.12
GO:0006383 transcription from RNA polymerase III
promoter		 P
IGI
SceS000005750
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00017830
GO:0008150 biological_process P
ND
MmuMGI:2384309
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017830
GO:0040007 growth P
IMP
CelWBGene00017830
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00017830
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00017830
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00017830
GO:0040039 inductive cell migration P
IMP
CelWBGene00017830
GO:0042797 tRNA transcription from RNA polymerase III
promoter		 P
IDA
SceS000005750

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC14C8.12
(Q92399)		 YOR224C
(S000005750)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC14C8.12
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
IDA
SceS000005750
GO:0005666 DNA-directed RNA polymerase III
complex		 C
IDA
SceS000005750
SpoSPBC14C8.12
TAS
SceS000005750
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
SceS000005750
SpoSPBC14C8.12
GO:0005829 cytosol C
IDA
SpoSPBC14C8.12
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
IDA
SpoSPBC14C8.12
GO:0003899 DNA-directed RNA polymerase activity F
IC
SceS000005750
IDA
SceS000005750
ISS
SpoSPBC14C8.12
GO:0005515 protein binding F
IPI
SpoSPBC14C8.12
GO:0006360 transcription from RNA polymerase I
promoter		 P
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006366 transcription from RNA polymerase II
promoter		 P
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0006383 transcription from RNA polymerase III
promoter		 P
IGI
SceS000005750
IPI
SceS000005750
TAS
SpoSPBC14C8.12
GO:0042797 tRNA transcription from RNA polymerase III
promoter		 P
IDA
SceS000005750

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