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Search term: YOR243C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PUS7
SGD link S000005769
Alternative ID YOR243C
Description Pseudouridine synthase, catalyzes pseudouridylation at position 35 in U2 snRNA, position 50 in 5S rRNA, position 13 in cytoplasmic tRNAs, and position 35 in pre-tRNA(Tyr); conserved in archaea, vertebrates, and some bacteria
Synonyms YOR243C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2339 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g04820 GI:15229362
Caenorhabditis elegans (Cel) CE05155
(WBGene00007101)		 GI:17557232 Q17426
Drosophila melanogaster (Dme) 7295083 GI:7295083
Homo sapiens (Hsa) Hs9506681 GI:9506681
Homo sapiens (Hsa) Hs13775210 GI:13775210
Saccharomyces cerevisiae (Sce) YOR243c
(S000005769)		 GI:6324817 Q08647
Schizosaccharomyces pombe (Spo) SPBC1A4.09 GI:19112604 O74343
Encephalitozoon cuniculi (Ecu) ECU06g1230 GI:19074373 Q8SV88


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005769
SpoSPBC1A4.09
ISS
SpoSPBC1A4.09
GO:0009982 pseudouridine synthase activity F
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09
TAS
AthAt3g04820
GO:0000455 enzyme-directed rRNA pseudouridine
synthesis		 P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0031119 tRNA pseudouridine synthesis P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6998

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PUS7 GI:50727002
Pan troglodytes (Ptr) PUS7 GI:114615279
Canis familiaris (Cfa) PUS7 GI:73981957
Mus musculus (Mmu) Pus7
(MGI:1925947)		 GI:89111935 B7ZNL8
Rattus norvegicus (Rno) Pus7 GI:109471589
Gallus gallus (Gga) PUS7 GI:118082077
Drosophila melanogaster (Dme) CG6745
(FBgn0035901)		 GI:21355799
Anopheles gambiae (Aga) AgaP_AGAP005743 GI:158294689
Schizosaccharomyces pombe (Spo) SPBC1A4.09 GI:19112604 O74343
Saccharomyces cerevisiae (Sce) PUS7
(S000005769)		 GI:6324817 Q08647
Kluyveromyces lactis (Kla) KLLA0F11253g GI:50311137
Eremothecium gossypii (Ego) AGOS_ACR136C GI:45185822
Arabidopsis thaliana (Ath) AT3G04820 GI:145338120
Oryza sativa (Osa) Os01g0773000 GI:115440235


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1925947
GO:0005634 nucleus C
IDA
SceS000005769
SpoSPBC1A4.09
ISS
SpoSPBC1A4.09
GO:0003674 molecular_function F
ND
MmuMGI:1925947
GO:0009982 pseudouridine synthase activity F
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09
TAS
AthAt3g04820
GO:0000455 enzyme-directed rRNA pseudouridine
synthesis		 P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0008150 biological_process P
ND
MmuMGI:1925947
GO:0031119 tRNA pseudouridine synthesis P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_691

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga1165 ENSANGP00000004385
Anopheles gambiae (Aga) aga1166 ENSANGP00000026457
Ashbya gossypii (Ago) ago1183 ACR136C
Arabidopsis thaliana (Ath) ath12527 At3g04820.1
Caenorhabditis elegans (Cel) cel64 B0024.11
(CE05155;
WBGene00007101)
Candida glabrata (Cgl) cgl3149 CAGL0J03718g
Dictyostelium discoideum (Ddi) ddi3691 DDB0216877
Debaryomyces hansenii (Dha) dha2016 DEHA0C13299g
Drosophila melanogaster (Dme) dme8580 CG6745-PA
(FBgn0035901)
Danio rerio (Dre) dre24446 ENSDARP00000007992
Danio rerio (Dre) dre11413 ENSDARP00000012754
Danio rerio (Dre) dre24447 ENSDARP00000018575
Danio rerio (Dre) dre26692 ENSDARP00000036421
Danio rerio (Dre) dre24448 ENSDARP00000038156
Escherichia coli (Eco) eco2653 16130652
Encephalitozoon cuniculi (Ecu) ecu1600 19074373
Takifugu rubripes (Fru) fru8280 SINFRUP00000134025
Takifugu rubripes (Fru) fru31566 SINFRUP00000156060
Gallus gallus (Gga) gga136 ENSGALP00000013182
Gallus gallus (Gga) gga135 ENSGALP00000013183
(PUS7)
Gallus gallus (Gga) gga367 ENSGALP00000015589
(PUS7L)
Homo sapiens (Hsa) hsa7358 ENSP00000343081
(PUS7L)		 Q9H0K6
Homo sapiens (Hsa) hsa29243 ENSP00000348722
(PUS7)		 Q96PZ0
Kluyveromyces lactis (Kla) kla4592 KLLA0F11253g
Mus musculus (Mmu) mmu9546 ENSMUSP00000044075
(MGI:1926145)		 Q8CE46-1
Mus musculus (Mmu) mmu6951 ENSMUSP00000077105
Neurospora crassa (Ncr) ncr6247 NCU06428.2
Oryza sativa (Osa) osa26642 3947.m00114
Oryza sativa (Osa) osa32052 4398.m00121
Oryza sativa (Osa) osa48951 5830.m00164
Plasmodium falciparum (Pfa) pfa559 PF10_0341
Rattus norvegicus (Rno) rno20635 ENSRNOP00000014063
(RGD:1307054)
Rattus norvegicus (Rno) rno27641 ENSRNOP00000033040
(RGD:1304692)
Saccharomyces cerevisiae (Sce) sce5989 YOR243C
(S000005769)
Schizosaccharomyces pombe (Spo) spo4921 SPBC1A4.09 O74343
Yarrowia lipolytica (Yli) yli2777 YALI0D01628g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1926145
PfaPF10_0341
GO:0005634 nucleus C
IDA
SceS000005769
SpoSPBC1A4.09
ISS
SpoSPBC1A4.09
GO:0003674 molecular_function F
ND
MmuMGI:1926145
GO:0009982 pseudouridine synthase activity F
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09
TAS
AthAt3g04820
GO:0000455 enzyme-directed rRNA pseudouridine
synthesis		 P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0008150 biological_process P
ND
MmuMGI:1926145
GO:0031119 tRNA pseudouridine synthesis P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC1A4.09
(O74343)		 YOR243C
(S000005769)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005769
SpoSPBC1A4.09
ISS
SpoSPBC1A4.09
GO:0009982 pseudouridine synthase activity F
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0000455 enzyme-directed rRNA pseudouridine
synthesis		 P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0031119 tRNA pseudouridine synthesis P
IMP
SceS000005769
ISS
SpoSPBC1A4.09
GO:0031120 snRNA pseudouridine synthesis P
IDA
SceS000005769
IMP
SceS000005769
ISS
SpoSPBC1A4.09

Back to the top
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GO info in one table:

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