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KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG2749 | ACDHYPE![]() |
KOGs classification | KOGs description |
INFORMATION STORAGE AND PROCESSING | mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0000214 | tRNA-intron endonuclease complex | C |
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GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005849 | mRNA cleavage factor complex | C |
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GO:0003674 | molecular_function | F |
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GO:0003723 | RNA binding | F |
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GO:0005488 | binding | F |
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GO:0005524 | ATP binding | F |
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GO:0051733 | polydeoxyribonucleotide kinase activity | F |
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GO:0051736 | ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity | F |
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GO:0000003 | reproduction | P |
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GO:0002119 | nematode larval development | P |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | P |
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GO:0006397 | mRNA processing | P |
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GO:0008380 | RNA splicing | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0009908 | flower development | P |
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GO:0010228 | vegetative to reproductive phase transition of meristem | P |
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GO:0030423 | targeting of mRNA for destruction involved in RNA interference | P |
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GO:0031123 | RNA 3'-end processing | P |
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GO:0031124 | mRNA 3'-end processing | P |
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GO:0035087 | siRNA loading onto RISC involved in RNA interference | P |
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GO:0040007 | growth | P |
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GO:0040010 | positive regulation of growth rate | P |
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GO:0040015 | negative regulation of multicellular organism growth | P |
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GO:0040035 | hermaphrodite genitalia development | P |
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GO:0048827 | phyllome development | P |
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HomoloGene cluster | Phylogenetic pattern |
101646 | ![]() |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005849 | mRNA cleavage factor complex | C |
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GO:0003723 | RNA binding | F |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0031123 | RNA 3'-end processing | P |
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GO:0031124 | mRNA 3'-end processing | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_1731 | ![]() |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||||
GO:0005575 | cellular_component | C |
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GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005849 | mRNA cleavage factor complex | C |
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GO:0003674 | molecular_function | F |
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GO:0003723 | RNA binding | F |
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GO:0005488 | binding | F |
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GO:0000003 | reproduction | P |
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GO:0002119 | nematode larval development | P |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0006397 | mRNA processing | P |
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GO:0008150 | biological_process | P |
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GO:0009792 | embryo development ending in birth or egg hatching | P |
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GO:0009908 | flower development | P |
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GO:0010228 | vegetative to reproductive phase transition of meristem | P |
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GO:0031123 | RNA 3'-end processing | P |
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GO:0031124 | mRNA 3'-end processing | P |
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GO:0040007 | growth | P |
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GO:0040010 | positive regulation of growth rate | P |
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GO:0040015 | negative regulation of multicellular organism growth | P |
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GO:0040035 | hermaphrodite genitalia development | P |
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GO:0048827 | phyllome development | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPAC22H10.05c (Q10299) | YOR250C (S000005776) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005634 | nucleus | C |
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GO:0005829 | cytosol | C |
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GO:0005849 | mRNA cleavage factor complex | C |
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GO:0003723 | RNA binding | F |
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GO:0006378 | mRNA polyadenylation | P |
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GO:0006379 | mRNA cleavage | P |
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GO:0031123 | RNA 3'-end processing | P |
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GO:0031124 | mRNA 3'-end processing | P |
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