YOGY Home YOGY Help

Search term: YOR303W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CPA1
SGD link S000005829
Alternative ID YOR303W
Description Small subunit of carbamoyl phosphate synthetase, which catalyzes a step in the synthesis of citrulline, an arginine precursor; translationally regulated by an attenuator peptide encoded by YOR302W within the CPA1 mRNA 5'-leader
Synonyms YOR303W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0370 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g29900 GI:15220587
Arabidopsis thaliana (Ath) At3g20330 GI:15231112
Arabidopsis thaliana (Ath) At3g27740 GI:2462781
Caenorhabditis elegans (Cel) CE03105 GI:17532699
Drosophila melanogaster (Dme) 7293258 GI:7293258
Homo sapiens (Hsa) Hs21361331 GI:14724922
Homo sapiens (Hsa) Hs14767576 GI:14767576
Homo sapiens (Hsa) Hs18105007
(CAD)		 GI:18105007 P27708
Homo sapiens (Hsa) HsM4503019 GI:4503019
Saccharomyces cerevisiae (Sce) YJL130c
(S000003666)		 GI:6322331 P07259
Saccharomyces cerevisiae (Sce) YJR109c
(S000003870)		 GI:6322569 P03965
Saccharomyces cerevisiae (Sce) YOR303w
(S000005829)		 GI:6324878 P07258
Schizosaccharomyces pombe (Spo) SPAC22G7.06c GI:19113967 Q09794
Schizosaccharomyces pombe (Spo) SPBC215.08c GI:19113477 O94313
Schizosaccharomyces pombe (Spo) SPBC56F2.09c GI:19113500 O60060
Arabidopsis thaliana (Ath) At1g29900 GI:15220587
Arabidopsis thaliana (Ath) At3g20330 GI:15231112
Arabidopsis thaliana (Ath) At3g27740 GI:2462781
Caenorhabditis elegans (Cel) CE03105 GI:17532699
Drosophila melanogaster (Dme) 7293258 GI:7293258
Homo sapiens (Hsa) Hs21361331 GI:14724922
Homo sapiens (Hsa) Hs14767576 GI:14767576
Homo sapiens (Hsa) Hs18105007
(CAD)		 GI:18105007 P27708
Homo sapiens (Hsa) HsM4503019 GI:4503019
Saccharomyces cerevisiae (Sce) YJL130c
(S000003666)		 GI:6322331 P07259
Saccharomyces cerevisiae (Sce) YJR109c
(S000003870)		 GI:6322569 P03965
Saccharomyces cerevisiae (Sce) YOR303w
(S000005829)		 GI:6324878 P07258
Schizosaccharomyces pombe (Spo) SPAC22G7.06c GI:19113967 Q09794
Schizosaccharomyces pombe (Spo) SPBC215.08c GI:19113477 O94313
Schizosaccharomyces pombe (Spo) SPBC56F2.09c GI:19113500 O60060
Arabidopsis thaliana (Ath) At1g29900 GI:15220587
Arabidopsis thaliana (Ath) At3g20330 GI:15231112
Arabidopsis thaliana (Ath) At3g27740 GI:2462781
Caenorhabditis elegans (Cel) CE03105 GI:17532699
Drosophila melanogaster (Dme) 7293258 GI:7293258
Homo sapiens (Hsa) Hs21361331 GI:14724922
Homo sapiens (Hsa) Hs14767576 GI:14767576
Homo sapiens (Hsa) Hs18105007
(CAD)		 GI:18105007 P27708
Homo sapiens (Hsa) HsM4503019 GI:4503019
Saccharomyces cerevisiae (Sce) YJL130c
(S000003666)		 GI:6322331 P07259
Saccharomyces cerevisiae (Sce) YJR109c
(S000003870)		 GI:6322569 P03965
Saccharomyces cerevisiae (Sce) YOR303w
(S000005829)		 GI:6324878 P07258
Schizosaccharomyces pombe (Spo) SPAC22G7.06c GI:19113967 Q09794
Schizosaccharomyces pombe (Spo) SPBC215.08c GI:19113477 O94313
Schizosaccharomyces pombe (Spo) SPBC56F2.09c GI:19113500 O60060


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaCAD
GO:0005737 cytoplasm C
IDA
SceS000003666
SpoSPBC56F2.09c
GO:0005739 mitochondrion C
IDA
SceS000003666
SpoSPBC215.08c
GO:0005829 cytosol C
EXP
HsaCAD
IDA
HsaCAD
SpoSPAC22G7.06c
GO:0005951 carbamoyl-phosphate synthase complex C
IDA
SceS000003870
S000005829
ISS
SceS000005829
SpoSPBC56F2.09c
SPBC215.08c
GO:0009507 chloroplast C
IDA
AthAt3g27740
At3g20330
At1g29900
GO:0009570 chloroplast stroma C
IDA
AthAt3g20330
At1g29900
At3g27740
GO:0016020 membrane C
IDA
AthAt1g29900
GO:0016021 integral to membrane C
IDA
SceS000003666
GO:0016363 nuclear matrix C
IDA
HsaCAD
GO:0003922 GMP synthase (glutamine-hydrolyzing)
activity		 F
IGI
SpoSPAC22G7.06c
GO:0004070 aspartate carbamoyltransferase
activity		 F
IDA
SceS000003666
IGI
AthAt3g20330
SpoSPAC22G7.06c
IMP
SceS000003666
ISS
HsaCAD
GO:0004086 carbamoyl-phosphate synthase activity F
ISS
AthAt1g29900
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity		 F
IDA
SceS000003666
S000005829
S000003870
IGI
SpoSPAC22G7.06c
IMP
SceS000005829
S000003870
ISS
AthAt3g27740
HsaCAD
SpoSPBC215.08c
SPBC56F2.09c
GO:0004151 dihydroorotase activity F
EXP
HsaCAD
IGI
SpoSPAC22G7.06c
ISS
HsaCAD
GO:0004672 protein kinase activity F
ISS
HsaCAD
GO:0005515 protein binding F
IPI
AthAt3g20330
GO:0005524 ATP binding F
ISS
AthAt1g29900
HsaCAD
SpoSPBC215.08c
GO:0016597 amino acid binding F
ISS
AthAt3g20330
GO:0016743 carboxyl- or carbamoyltransferase
activity		 F
ISS
AthAt3g20330
GO:0019899 enzyme binding F
IPI
HsaCAD
GO:0070335 aspartate binding F
ISS
HsaCAD
GO:0006082 organic acid metabolic process P
RCA
SceS000003870
S000005829
GO:0006207 'de novo' pyrimidine base biosynthetic
process		 P
IDA
SceS000003666
IGI
SpoSPAC22G7.06c
IMP
SceS000003666
ISS
HsaCAD
GO:0006414 translational elongation P
RCA
SceS000003870
GO:0006417 regulation of translation P
RCA
SceS000003666
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000003870
S000005829
GO:0006520 cellular amino acid metabolic process P
ISS
AthAt3g20330
GO:0006526 arginine biosynthetic process P
IMP
SceS000005829
S000003870
ISS
SpoSPBC215.08c
SPBC56F2.09c
NAS
AthAt1g29900
GO:0006541 glutamine metabolic process P
IDA
SceS000003666
IGI
SpoSPAC22G7.06c
ISS
HsaCAD
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000005829
S000003870
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003870
S000005829
GO:0009220 pyrimidine ribonucleotide biosynthetic
process		 P
IGI
AthAt3g20330
GO:0016036 cellular response to phosphate
starvation		 P
IEP
AthAt3g20330
At3g27740
At1g29900
GO:0018107 peptidyl-threonine phosphorylation P
ISS
HsaCAD
GO:0045984 negative regulation of pyrimidine base metabolic
process		 P
IDA
SceS000003666
GO:0046483 heterocycle metabolic process P
RCA
SceS000003870
GO:0046777 protein amino acid autophosphorylation P
ISS
HsaCAD

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
7022

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) arg5
(SPBC56F2.09c)		 GI:19113500 O60060
Saccharomyces cerevisiae (Sce) CPA1
(S000005829)		 GI:6324878 P07258
Kluyveromyces lactis (Kla) KLLA0F24882g GI:50312311
Eremothecium gossypii (Ego) AGOS_AFR534W GI:45199052
Magnaporthe grisea (Mgr) MGG_01743 GI:145613299
Neurospora crassa (Ncr) NCU07732.1 GI:32415920
Arabidopsis thaliana (Ath) CARA GI:18405507
Oryza sativa (Osa) Os02g0708100 GI:115448201


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC56F2.09c
GO:0005951 carbamoyl-phosphate synthase complex C
IDA
SceS000005829
ISS
SceS000005829
SpoSPBC56F2.09c
GO:0009507 chloroplast C
IDA
AthCARA
GO:0009570 chloroplast stroma C
IDA
AthCARA
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity		 F
IDA
SceS000005829
IMP
SceS000005829
ISS
AthCARA
SpoSPBC56F2.09c
GO:0006082 organic acid metabolic process P
RCA
SceS000005829
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000005829
GO:0006526 arginine biosynthetic process P
IMP
SceS000005829
ISS
SpoSPBC56F2.09c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000005829
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000005829
GO:0009067 aspartate family amino acid biosynthetic
process		 P
TAS
AthCARA
GO:0016036 cellular response to phosphate
starvation		 P
IEP
AthCARA

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2085

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3726 AFR534W
Arabidopsis thaliana (Ath) ath15130 At3g27740.1
Candida glabrata (Cgl) cgl2935 CAGL0I09592g
Cryptococcus neoformans (Cne) cne771 163.m03932
Debaryomyces hansenii (Dha) dha5834 DEHA0G03102g
Escherichia coli (Eco) eco33 16128026
Gallus gallus (Gga) gga21115 ENSGALP00000004646
(CPS1)
Gallus gallus (Gga) gga21116 ENSGALP00000004647
(CPS1)		 Q5KTI9
Kluyveromyces lactis (Kla) kla5188 KLLA0F24882g
Mus musculus (Mmu) mmu494 ENSMUSP00000075593
Neurospora crassa (Ncr) ncr7528 NCU07732.2
Oryza sativa (Osa) osa6795 2484.m00083
Oryza sativa (Osa) osa6796 2484.m00096
Oryza sativa (Osa) osa6797 2484.m00097
Oryza sativa (Osa) osa6798 2484.m00098
Oryza sativa (Osa) osa28666 4206.m00156
Oryza sativa (Osa) osa58045 6250.m00039
Saccharomyces cerevisiae (Sce) sce6051 YOR303W
(S000005829)
Schizosaccharomyces pombe (Spo) spo3158 SPBC56F2.09c O60060
Yarrowia lipolytica (Yli) yli3012 YALI0D07370g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC56F2.09c
GO:0005951 carbamoyl-phosphate synthase complex C
IDA
SceS000005829
ISS
SceS000005829
SpoSPBC56F2.09c
GO:0009507 chloroplast C
IDA
AthAt3g27740
GO:0009570 chloroplast stroma C
IDA
AthAt3g27740
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity		 F
IDA
SceS000005829
IMP
SceS000005829
ISS
AthAt3g27740
SpoSPBC56F2.09c
GO:0006082 organic acid metabolic process P
RCA
SceS000005829
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000005829
GO:0006526 arginine biosynthetic process P
IMP
SceS000005829
ISS
SpoSPBC56F2.09c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000005829
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000005829
GO:0016036 cellular response to phosphate
starvation		 P
IEP
AthAt3g27740

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC56F2.09c
(O60060)		 YOR303W
(S000005829)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC56F2.09c
GO:0005951 carbamoyl-phosphate synthase complex C
IDA
SceS000005829
ISS
SceS000005829
SpoSPBC56F2.09c
GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing)
activity		 F
IDA
SceS000005829
IMP
SceS000005829
ISS
SpoSPBC56F2.09c
GO:0006082 organic acid metabolic process P
RCA
SceS000005829
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000005829
GO:0006526 arginine biosynthetic process P
IMP
SceS000005829
ISS
SpoSPBC56F2.09c
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000005829
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000005829

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk