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Search term: YOR310C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NOP58
SGD link S000005837
Alternative ID YOR310C
Description Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA
Synonyms YOR310C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2572 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGINFORMATION STORAGE AND PROCESSING Ribosome biogenesis protein - Nop58p/Nop5p

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g05060 GI:15229884
Arabidopsis thaliana (Ath) At5g27120 GI:15240445
Arabidopsis thaliana (Ath) At5g27140 GI:15240447
Caenorhabditis elegans (Cel) CE18307
(WBGene00020915)		 GI:17509449 O45012
Drosophila melanogaster (Dme) 7297189 GI:7297189
Homo sapiens (Hsa) Hs7706254
(NOP58)		 GI:7706254 Q9Y2X3
Saccharomyces cerevisiae (Sce) YOR310c
(S000005837)		 GI:6324886 Q12499
Schizosaccharomyces pombe (Spo) SPAC23G3.06 GI:19114018 Q9P7S7
Encephalitozoon cuniculi (Ecu) ECU04g0820 GI:19074159 Q8SS43
Encephalitozoon cuniculi (Ecu) ECU10g0200 GI:19074629 Q8SUH4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaNOP58
SpoSPAC23G3.06
GO:0005730 nucleolus C
IDA
AthAt5g27120
At3g05060
HsaNOP58
SceS000005837
SpoSPAC23G3.06
ISS
SpoSPAC23G3.06
TAS
HsaNOP58
GO:0005732 small nucleolar ribonucleoprotein
complex		 C
IDA
HsaNOP58
ISS
SpoSPAC23G3.06
GO:0015030 Cajal body C
IDA
HsaNOP58
GO:0016020 membrane C
IDA
AthAt5g27140
At3g05060
GO:0030686 90S preribosome C
IDA
SceS000005837
GO:0031428 box C/D snoRNP complex C
IDA
SceS000005837
IPI
SceS000005837
NAS
HsaNOP58
GO:0032040 small-subunit processome C
IDA
SceS000005837
GO:0070761 pre-snoRNP complex C
IDA
HsaNOP58
GO:0003674 molecular_function F
ND
SceS000005837
GO:0003677 DNA binding F
ISS
AthAt5g27140
At5g27120
At3g05060
GO:0005515 protein binding F
IPI
HsaNOP58
GO:0030515 snoRNA binding F
IDA
HsaNOP58
ISS
SpoSPAC23G3.06
GO:0000003 reproduction P
IMP
CelWBGene00020915
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000005837
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000005837
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000005837
GO:0002119 nematode larval development P
IMP
CelWBGene00020915
GO:0006364 rRNA processing P
ISS
SpoSPAC23G3.06
TAS
HsaNOP58
GO:0006608 snRNP protein import into nucleus P
ISS
HsaNOP58
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00020915
GO:0008150 biological_process P
ND
AthAt5g27120
At5g27140
At3g05060
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00020915
GO:0016049 cell growth P
TAS
HsaNOP58
GO:0040007 growth P
IMP
CelWBGene00020915
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00020915
GO:0040019 positive regulation of embryonic
development		 P
IMP
CelWBGene00020915
GO:0040027 negative regulation of vulval development P
IMP
CelWBGene00020915
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00020915
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC23G3.06

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
7024

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) NOP58 GI:7706254 Q9Y2X3
Pan troglodytes (Ptr) NOP58 GI:114582688
Canis familiaris (Cfa) NOP58 GI:74005181
Mus musculus (Mmu) Nop58
(MGI:1933184)		 GI:120407050 Q6DFW4
Rattus norvegicus (Rno) Nol5
(RGD:620484)		 GI:11120704
Gallus gallus (Gga) NOP58 GI:50750286
Drosophila melanogaster (Dme) nop5
(FBgn0026196)		 GI:17137636
Anopheles gambiae (Aga) AgaP_AGAP002171 GI:158284979
Caenorhabditis elegans (Cel) nol-5
(CE18307;
WBGene00020915)		 GI:17509449 O45012
Schizosaccharomyces pombe (Spo) SPAC23G3.06 GI:19114018 Q9P7S7
Saccharomyces cerevisiae (Sce) NOP58
(S000005837)		 GI:6324886 Q12499
Kluyveromyces lactis (Kla) KLLA0F08613g GI:50310897
Eremothecium gossypii (Ego) AGOS_AFR328C GI:45198846
Magnaporthe grisea (Mgr) MGG_07008 GI:145605593
Neurospora crassa (Ncr) NCU03396.1 GI:32404082
Arabidopsis thaliana (Ath) AT3G05060 GI:15229884
Arabidopsis thaliana (Ath) AT5G27120 GI:15240445
Oryza sativa (Osa) Os03g0350300 GI:115453025
Oryza sativa (Osa) Os03g0350100 GI:115453023
Plasmodium falciparum (Pfa) PF10_0085 GI:124802116


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
PfaPF10_0085
GO:0005634 nucleus C
IDA
HsaNOP58
SpoSPAC23G3.06
GO:0005730 nucleolus C
IC
MmuMGI:1933184
IDA
AthAt5g27120
At3g05060
HsaNOP58
SceS000005837
SpoSPAC23G3.06
ISS
SpoSPAC23G3.06
TAS
HsaNOP58
GO:0005732 small nucleolar ribonucleoprotein
complex		 C
IDA
HsaNOP58
ISO
MmuMGI:1933184
ISS
SpoSPAC23G3.06
GO:0005875 microtubule associated complex C
ISS
DmeFBgn0026196
GO:0015030 Cajal body C
IDA
HsaNOP58
GO:0016020 membrane C
IDA
AthAt3g05060
GO:0030686 90S preribosome C
IDA
SceS000005837
GO:0031428 box C/D snoRNP complex C
IDA
SceS000005837
IPI
SceS000005837
NAS
HsaNOP58
GO:0032040 small-subunit processome C
IDA
SceS000005837
GO:0070761 pre-snoRNP complex C
IDA
HsaNOP58
GO:0003674 molecular_function F
ND
SceS000005837
GO:0003677 DNA binding F
ISS
AthAt5g27120
At3g05060
GO:0003723 RNA binding F
ISS
PfaPF10_0085
GO:0005515 protein binding F
IPI
HsaNOP58
GO:0030515 snoRNA binding F
IDA
HsaNOP58
ISS
SpoSPAC23G3.06
GO:0030519 snoRNP binding F
ISO
MmuMGI:1933184
GO:0000003 reproduction P
IMP
CelWBGene00020915
GO:0000447 endonucleolytic cleavage in ITS1 to separate
SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000005837
GO:0000472 endonucleolytic cleavage to generate mature 5'-end
of SSU-rRNA from (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000005837
GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000005837
GO:0002119 nematode larval development P
IMP
CelWBGene00020915
GO:0006364 rRNA processing P
ISS
PfaPF10_0085
SpoSPAC23G3.06
NAS
DmeFBgn0026196
TAS
HsaNOP58
GO:0006608 snRNP protein import into nucleus P
ISO
MmuMGI:1933184
ISS
HsaNOP58
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00020915
GO:0008150 biological_process P
ND
AthAt5g27120
At3g05060
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00020915
GO:0016049 cell growth P
TAS
HsaNOP58
GO:0040007 growth P
IMP
CelWBGene00020915
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00020915
GO:0040019 positive regulation of embryonic
development		 P
IMP
CelWBGene00020915
GO:0040027 negative regulation of vulval development P
IMP
CelWBGene00020915
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00020915
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC23G3.06

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1627

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4299 ENSANGP00000019413
Ashbya gossypii (Ago) ago3520 AFR328C
Arabidopsis thaliana (Ath) ath12554 At3g05060.1
Arabidopsis thaliana (Ath) ath24987 At5g27120.1
Caenorhabditis elegans (Cel) cel16725 W01B11.3
(CE18307;
WBGene00020915)
Candida glabrata (Cgl) cgl2944 CAGL0I09790g
Cryptococcus neoformans (Cne) cne1082 180.m00005
Dictyostelium discoideum (Ddi) ddi775 DDB0189774
Debaryomyces hansenii (Dha) dha6035 DEHA0G07491g
Drosophila melanogaster (Dme) dme1153 CG10206-PA
(FBgn0026196)
Danio rerio (Dre) dre20259 ENSDARP00000023410
Encephalitozoon cuniculi (Ecu) ecu797 19074159
Takifugu rubripes (Fru) fru18069 SINFRUP00000153775
Gallus gallus (Gga) gga21356 ENSGALP00000013761
(NOP58)
Homo sapiens (Hsa) hsa19128 ENSP00000264279
(NOP58)		 Q9Y2X3
Kluyveromyces lactis (Kla) kla4471 KLLA0F08613g
Mus musculus (Mmu) mmu407 ENSMUSP00000027174
(MGI:1933184)		 Q6DFW4
Neurospora crassa (Ncr) ncr3292 NCU03396.2
Oryza sativa (Osa) osa63009 6610.m00147
Oryza sativa (Osa) osa63011 6610.m00148
Oryza sativa (Osa) osa63023 6610.m00312
Plasmodium falciparum (Pfa) pfa307 PF10_0085
Rattus norvegicus (Rno) rno30109 ENSRNOP00000022676
(RGD:620484)		 Q9QZ86
Saccharomyces cerevisiae (Sce) sce6059 YOR310C
(S000005837)
Schizosaccharomyces pombe (Spo) spo2981 SPAC23G3.06 Q9P7S7
Yarrowia lipolytica (Yli) yli782 YALI0B00946g