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Search term: YOR341W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPA190
SGD link S000005868
Alternative ID YOR341W
Description RNA polymerase I subunit; largest subunit of RNA polymerase I
Synonyms YOR341W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0262 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNA polymerase I, large subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g57660 GI:15230368
Caenorhabditis elegans (Cel) CE22157
(WBGene00012999)		 GI:17537243
Drosophila melanogaster (Dme) 7303170
(FBgn0019938)		 GI:17647875
Homo sapiens (Hsa) Hs7661686 GI:7661686
Saccharomyces cerevisiae (Sce) YOR341w
(S000005868)		 GI:6324917 P10964
Schizosaccharomyces pombe (Spo) SPBC4C3.05c GI:19113092 P15398
Encephalitozoon cuniculi (Ecu) ECU04g1400 GI:19074219 Q8SS15
Arabidopsis thaliana (Ath) At3g57660 GI:15230368
Caenorhabditis elegans (Cel) CE22157
(WBGene00012999)		 GI:17537243
Drosophila melanogaster (Dme) 7303170
(FBgn0019938)		 GI:17647875
Homo sapiens (Hsa) Hs7661686 GI:7661686
Saccharomyces cerevisiae (Sce) YOR341w
(S000005868)		 GI:6324917 P10964
Schizosaccharomyces pombe (Spo) SPBC4C3.05c GI:19113092 P15398
Encephalitozoon cuniculi (Ecu) ECU04g1400 GI:19074219 Q8SS15
Arabidopsis thaliana (Ath) At3g57660 GI:15230368
Caenorhabditis elegans (Cel) CE22157
(WBGene00012999)		 GI:17537243
Drosophila melanogaster (Dme) 7303170
(FBgn0019938)		 GI:17647875
Homo sapiens (Hsa) Hs7661686 GI:7661686
Saccharomyces cerevisiae (Sce) YOR341w
(S000005868)		 GI:6324917 P10964
Schizosaccharomyces pombe (Spo) SPBC4C3.05c GI:19113092 P15398
Encephalitozoon cuniculi (Ecu) ECU04g1400 GI:19074219 Q8SS15


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt3g57660
ISS
AthAt3g57660
NAS
DmeFBgn0019938
GO:0005730 nucleolus C
IDA
SceS000005868
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
SceS000005868
ISS
DmeFBgn0019938
SpoSPBC4C3.05c
GO:0005829 cytosol C
IDA
SpoSPBC4C3.05c
GO:0003677 DNA binding F
ISS
AthAt3g57660
GO:0003899 DNA-directed RNA polymerase activity F
IDA
SceS000005868
IMP
SceS000005868
ISS
AthAt3g57660
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
DmeFBgn0019938
GO:0006350 transcription P
ISS
AthAt3g57660
GO:0006360 transcription from RNA polymerase I
promoter		 P
ISS
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
DmeFBgn0019938
RCA
SceS000005868
GO:0006406 mRNA export from nucleus P
IMP
SpoSPBC4C3.05c
GO:0007000 nucleolus organization P
IMP
SpoSPBC4C3.05c
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SpoSPBC4C3.05c
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript		 P
IGI
SceS000005868
IMP
SceS000005868

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
7033

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) POLR1A GI:103471997
Pan troglodytes (Ptr) POLR1A GI:114578602
Canis familiaris (Cfa) POLR1A GI:73980898
Mus musculus (Mmu) Polr1a
(MGI:1096397)		 GI:34328146 O35134
Rattus norvegicus (Rno) Polr1a GI:13929086
Gallus gallus (Gga) POLR1A GI:118090814
Drosophila melanogaster (Dme) RpI1
(FBgn0019938)		 GI:17647875
Caenorhabditis elegans (Cel) Y48E1A.1
(CE22157;
WBGene00012999)		 GI:71998295
Schizosaccharomyces pombe (Spo) nuc1
(SPBC4C3.05c)		 GI:19113092 P15398
Saccharomyces cerevisiae (Sce) RPA190
(S000005868)		 GI:6324917 P10964
Kluyveromyces lactis (Kla) KLLA0F23243g GI:50312167
Eremothecium gossypii (Ego) AGOS_ADR374C GI:45188247
Magnaporthe grisea (Mgr) MGG_01158 GI:39973391
Neurospora crassa (Ncr) NCU01638.1 GI:32415195
Arabidopsis thaliana (Ath) NRPA1 GI:15230368


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthNRPA1
MmuMGI:1096397
ISS
AthNRPA1
NAS
DmeFBgn0019938
GO:0005654 nucleoplasm C
EXP
HsaPOLR1A
GO:0005730 nucleolus C
IDA
SceS000005868
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
MmuMGI:1096397
SceS000005868
ISO
MmuMGI:1096397
ISS
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
HsaPOLR1A
GO:0005829 cytosol C
IDA
SpoSPBC4C3.05c
GO:0003677 DNA binding F
ISS
AthNRPA1
GO:0003899 DNA-directed RNA polymerase activity F
IDA
SceS000005868
IMP
SceS000005868
ISO
MmuMGI:1096397
ISS
AthNRPA1
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
DmeFBgn0019938
GO:0005515 protein binding F
IPI
HsaPOLR1A
MmuMGI:1096397
GO:0006350 transcription P
ISS
AthNRPA1
GO:0006360 transcription from RNA polymerase I
promoter		 P
ISS
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
DmeFBgn0019938
RCA
SceS000005868
GO:0006406 mRNA export from nucleus P
IMP
SpoSPBC4C3.05c
GO:0007000 nucleolus organization P
IMP
SpoSPBC4C3.05c
GO:0009303 rRNA transcription P
ISO
MmuMGI:1096397
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SpoSPBC4C3.05c
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript		 P
IGI
SceS000005868
IMP
SceS000005868

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1691

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga9172 ENSANGP00000008667
Anopheles gambiae (Aga) aga9171 ENSANGP00000028677
Ashbya gossypii (Ago) ago2115 ADR374C
Arabidopsis thaliana (Ath) ath17168 At3g57660.1
Caenorhabditis elegans (Cel) cel19233 Y48E1A.1a
(CE22157;
WBGene00012999)
Candida glabrata (Cgl) cgl1181 CAGL0E05500g
Cryptococcus neoformans (Cne) cne888 163.m06272
Dictyostelium discoideum (Ddi) ddi11951 DDB0216292
Debaryomyces hansenii (Dha) dha1947 DEHA0C11682g
Drosophila melanogaster (Dme) dme5096 CG10122-PA
(FBgn0019938)
Danio rerio (Dre) dre13883 ENSDARP00000044707
(polr1a)		 Q7SXQ2
Encephalitozoon cuniculi (Ecu) ecu857 19074219
Takifugu rubripes (Fru) fru12493 SINFRUP00000157438
Takifugu rubripes (Fru) fru12494 SINFRUP00000157439
Gallus gallus (Gga) gga18440 ENSGALP00000025377
Gallus gallus (Gga) gga18441 ENSGALP00000025378
(POLR1A)
Gallus gallus (Gga) gga18442 ENSGALP00000025379
Homo sapiens (Hsa) hsa18117 ENSP00000263857
(POLR1A)		 O95602
Kluyveromyces lactis (Kla) kla5115 KLLA0F23243g
Mus musculus (Mmu) mmu22106 ENSMUSP00000060858
(MGI:1096397)		 O35134
Mus musculus (Mmu) mmu22107 ENSMUSP00000066711
(MGI:1096397)		 Q8C2X2
Neurospora crassa (Ncr) ncr1592 NCU01638.2
Oryza sativa (Osa) osa2503 1951.m00150
Plasmodium falciparum (Pfa) pfa3544 PFE0465c
Rattus norvegicus (Rno) rno21619 ENSRNOP00000013417
(RGD:620824)		 Q6LCR5
Rattus norvegicus (Rno) rno21618 ENSRNOP00000013587
(RGD:620824)		 O54889
Saccharomyces cerevisiae (Sce) sce6094 YOR341W
(S000005868)
Schizosaccharomyces pombe (Spo) spo4036 SPBC4C3.05c P15398
Yarrowia lipolytica (Yli) yli5924 YALI0F13783g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt3g57660
MmuMGI:1096397
ISS
AthAt3g57660
NAS
DmeFBgn0019938
GO:0005730 nucleolus C
IDA
SceS000005868
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
MmuMGI:1096397
SceS000005868
ISO
MmuMGI:1096397
ISS
DmeFBgn0019938
SpoSPBC4C3.05c
TAS
PfaPFE0465c
GO:0005829 cytosol C
IDA
SpoSPBC4C3.05c
GO:0003677 DNA binding F
ISS
AthAt3g57660
GO:0003899 DNA-directed RNA polymerase activity F
IDA
SceS000005868
IMP
SceS000005868
ISO
MmuMGI:1096397
ISS
AthAt3g57660
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
DmeFBgn0019938
GO:0005515 protein binding F
IPI
MmuMGI:1096397
GO:0006350 transcription P
ISS
AthAt3g57660
GO:0006360 transcription from RNA polymerase I
promoter		 P
ISS
DmeFBgn0019938
SpoSPBC4C3.05c
NAS
DmeFBgn0019938
RCA
SceS000005868
TAS
PfaPFE0465c
GO:0006406 mRNA export from nucleus P
IMP
SpoSPBC4C3.05c
GO:0007000 nucleolus organization P
IMP
SpoSPBC4C3.05c
GO:0009303 rRNA transcription P
ISO
MmuMGI:1096397
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SpoSPBC4C3.05c
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript		 P
IGI
SceS000005868
IMP
SceS000005868

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC4C3.05c
(P15398)		 YOR341W
(S000005868)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SceS000005868
GO:0005736 DNA-directed RNA polymerase I complex C
IDA
SceS000005868
ISS
SpoSPBC4C3.05c
GO:0005829 cytosol C
IDA
SpoSPBC4C3.05c
GO:0003899 DNA-directed RNA polymerase activity F
IDA
SceS000005868
IMP
SceS000005868
ISS
SpoSPBC4C3.05c
GO:0006360 transcription from RNA polymerase I
promoter		 P
ISS
SpoSPBC4C3.05c
RCA
SceS000005868
GO:0006406 mRNA export from nucleus P
IMP
SpoSPBC4C3.05c
GO:0007000 nucleolus organization P
IMP
SpoSPBC4C3.05c
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SpoSPBC4C3.05c
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript		 P
IGI
SceS000005868
IMP
SceS000005868

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Query species:

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GO info in one table:

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