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Search term: YOR369C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS12
SGD link S000005896
Alternative ID YOR369C
Description Protein component of the small (40S) ribosomal subunit; has similarity to rat ribosomal protein S12
Synonyms YOR369C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3406 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S12

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g15930 GI:15218373
Arabidopsis thaliana (Ath) At1g80800 GI:15220830
Arabidopsis thaliana (Ath) At2g32060 GI:15225180
Caenorhabditis elegans (Cel) CE26896
(WBGene00004481)		 GI:17554772 P49196
Drosophila melanogaster (Dme) 7294509 GI:12643288
Homo sapiens (Hsa) Hs14277700
(RPS12)		 GI:14277700 P25398
Homo sapiens (Hsa) Hs17462075_1 GI:17462075
Homo sapiens (Hsa) Hs17463746 GI:17463746
Homo sapiens (Hsa) Hs18553260 GI:18553260
Homo sapiens (Hsa) Hs20471875 GI:20471875
Homo sapiens (Hsa) Hs20548341 GI:20548341
Homo sapiens (Hsa) Hs22043188 GI:22043188
Homo sapiens (Hsa) Hs22055843 GI:22055843
Saccharomyces cerevisiae (Sce) YOR369c
(S000005896)		 GI:6324945 P48589
Schizosaccharomyces pombe (Spo) SPBC1685.02c GI:19111998 O74322
Schizosaccharomyces pombe (Spo) SPCC962.04 GI:19075369 O14062
Encephalitozoon cuniculi (Ecu) ECU01g0920 GI:19075102


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g32060
SpoSPBC1685.02c
GO:0005829 cytosol C
EXP
HsaRPS12
IDA
SpoSPBC1685.02c
GO:0022626 cytosolic ribosome C
IDA
AthAt2g32060
At1g15930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g32060
At1g15930
HsaRPS12
SceS000005896
ISS
SpoSPBC1685.02c
SPCC962.04
NAS
HsaRPS12
GO:0003674 molecular_function F
ND
HsaRPS12
GO:0003735 structural constituent of ribosome F
IDA
SceS000005896
ISS
AthAt2g32060
At1g15930
SpoSPBC1685.02c
SPCC962.04
GO:0000003 reproduction P
IMP
CelWBGene00004481
GO:0002119 nematode larval development P
IMP
CelWBGene00004481
GO:0006412 translation P
IC
HsaRPS12
SceS000005896
ISS
AthAt2g32060
At1g15930
SpoSPBC1685.02c
SPCC962.04
NAS
HsaRPS12
GO:0006414 translational elongation P
EXP
HsaRPS12
GO:0009651 response to salt stress P
IEP
AthAt1g15930
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004481
GO:0010171 body morphogenesis P
IMP
CelWBGene00004481
GO:0040007 growth P
IMP
CelWBGene00004481
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004481
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00004481
GO:0046686 response to cadmium ion P
IEP
AthAt1g15930

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
110750

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS12 GI:14277700 P25398
Pan troglodytes (Ptr) RPS12 GI:114639389
Canis familiaris (Cfa) RPS12 GI:73945531
Mus musculus (Mmu) Gm14059 GI:149250091
Rattus norvegicus (Rno) Rps12
(RGD:62024)		 GI:78126139
Gallus gallus (Gga) RPS12 GI:50742739
Caenorhabditis elegans (Cel) rps-12
(CE26896;
WBGene00004481)		 GI:17554772 P49196
Schizosaccharomyces pombe (Spo) rps12 GI:19075369
Schizosaccharomyces pombe (Spo) rps12-2
(SPBC1685.02c)		 GI:19111998 O74322
Saccharomyces cerevisiae (Sce) RPS12
(S000005896)		 GI:6324945 P48589
Kluyveromyces lactis (Kla) KLLA0F00352g GI:50310151
Eremothecium gossypii (Ego) AGOS_ADR412C GI:45188284
Magnaporthe grisea (Mgr) MGG_06480 GI:145608652
Neurospora crassa (Ncr) NCU06432.1 GI:32411613
Arabidopsis thaliana (Ath) AT1G15930 GI:15218373
Arabidopsis thaliana (Ath) AT2G32060 GI:15225180
Oryza sativa (Osa) Os07g0150200 GI:115470601
Oryza sativa (Osa) Os07g0229900 GI:115471261
Plasmodium falciparum (Pfa) MAL3P2.28 GI:124504807


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g32060
SpoSPBC1685.02c
GO:0005829 cytosol C
EXP
HsaRPS12
IDA
SpoSPBC1685.02c
GO:0022626 cytosolic ribosome C
IDA
AthAt2g32060
At1g15930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g32060
At1g15930
HsaRPS12
SceS000005896
ISS
SpoSPBC1685.02c
NAS
HsaRPS12
GO:0003674 molecular_function F
ND
HsaRPS12
GO:0003735 structural constituent of ribosome F
IDA
SceS000005896
ISS
AthAt2g32060
At1g15930
SpoSPBC1685.02c
GO:0000003 reproduction P
IMP
CelWBGene00004481
GO:0002119 nematode larval development P
IMP
CelWBGene00004481
GO:0006412 translation P
IC
HsaRPS12
SceS000005896
ISS
AthAt2g32060
At1g15930
SpoSPBC1685.02c
NAS
HsaRPS12
GO:0006414 translational elongation P
EXP
HsaRPS12
GO:0009651 response to salt stress P
IEP
AthAt1g15930
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004481
GO:0010171 body morphogenesis P
IMP
CelWBGene00004481
GO:0040007 growth P
IMP
CelWBGene00004481
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004481
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00004481
GO:0046686 response to cadmium ion P
IEP
AthAt1g15930

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_698

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8082 ENSANGP00000022284
Ashbya gossypii (Ago) ago2152 ADR412C
Arabidopsis thaliana (Ath) ath1701 At1g15930.1
Arabidopsis thaliana (Ath) ath1702 At1g15930.2
Arabidopsis thaliana (Ath) ath10211 At2g32060.1
Arabidopsis thaliana (Ath) ath10212 At2g32060.2
Arabidopsis thaliana (Ath) ath10213 At2g32060.3
Caenorhabditis elegans (Cel) cel10249 F54E7.2
(CE26896;
WBGene00004481)
Candida glabrata (Cgl) cgl3306 CAGL0J07238g
Cryptococcus neoformans (Cne) cne5477 179.m00330
Dictyostelium discoideum (Ddi) ddi13064 DDB0230044
Debaryomyces hansenii (Dha) dha4519 DEHA0F03003g
Drosophila melanogaster (Dme) dme9330 CG11271-PA
(FBgn0014027)
Drosophila melanogaster (Dme) dme9331 CG11271-PB
(FBgn0014027)
Drosophila melanogaster (Dme) dme9332 CG11271-PF
(FBgn0014027)
Danio rerio (Dre) dre15671 ENSDARP00000016942
Danio rerio (Dre) dre15674 ENSDARP00000040900
Danio rerio (Dre) dre15714 ENSDARP00000046209
Encephalitozoon cuniculi (Ecu) ecu1739 19075102
Takifugu rubripes (Fru) fru27100 SINFRUP00000133881
Gallus gallus (Gga) gga15428 ENSGALP00000022626
(RPS12)		 P84175
Homo sapiens (Hsa) hsa27770 ENSP00000230050
(RPS12)		 P25398
Kluyveromyces lactis (Kla) kla4094 KLLA0F00352g
Mus musculus (Mmu) mmu29513 ENSMUSP00000072877
Mus musculus (Mmu) mmu26857 ENSMUSP00000074860
Mus musculus (Mmu) mmu29509 ENSMUSP00000076884
Mus musculus (Mmu) mmu29510 ENSMUSP00000078171
Mus musculus (Mmu) mmu24084 ENSMUSP00000079166
Mus musculus (Mmu) mmu29511 ENSMUSP00000079181
Mus musculus (Mmu) mmu29512 ENSMUSP00000080493
Mus musculus (Mmu) mmu13987 ENSMUSP00000080723
Neurospora crassa (Ncr) ncr6251 NCU06432.2
Oryza sativa (Osa) osa3254 2011.m00155
Oryza sativa (Osa) osa3751 2061.m00222
Oryza sativa (Osa) osa30347 4316.m00139
Oryza sativa (Osa) osa53435 6131.m00142
Oryza sativa (Osa) osa72887 7266.m00079
Plasmodium falciparum (Pfa) pfa2724 PFC0295c
Rattus norvegicus (Rno) rno273 ENSRNOP00000022184
(RGD:62024)		 Q6PDW1
Rattus norvegicus (Rno) rno19719 ENSRNOP00000041932
Saccharomyces cerevisiae (Sce) sce6124 YOR369C
(S000005896)
Schizosaccharomyces pombe (Spo) spo833 SPBC1685.02c O74322
Schizosaccharomyces pombe (Spo) spo513 SPCC962.04 O14062
Yarrowia lipolytica (Yli) yli5602 YALI0F06160g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g32060
SpoSPBC1685.02c
GO:0005829 cytosol C
IDA
SpoSPBC1685.02c
GO:0022626 cytosolic ribosome C
IDA
AthAt2g32060
At1g15930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt2g32060
At1g15930
SceS000005896
ISS
PfaPFC0295c
SpoSPBC1685.02c
SPCC962.04
GO:0003735 structural constituent of ribosome F
IDA
SceS000005896
ISS
AthAt2g32060
At1g15930
SpoSPBC1685.02c
SPCC962.04
GO:0000003 reproduction P
IMP
CelWBGene00004481
GO:0002119 nematode larval development P
IMP
CelWBGene00004481
GO:0006412 translation P
IC
SceS000005896
ISS
AthAt2g32060
At1g15930
SpoSPBC1685.02c
SPCC962.04
GO:0009651 response to salt stress P
IEP
AthAt1g15930
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004481
GO:0010171 body morphogenesis P
IMP
CelWBGene00004481
GO:0040007 growth P
IMP
CelWBGene00004481
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004481
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00004481
GO:0046686 response to cadmium ion P
IEP
AthAt1g15930

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC1685.02c
(O74322)		 YOR369C
(S000005896)
SPCC962.04
(O14062)		 YOR369C
(S000005896)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1685.02c
GO:0005829 cytosol C
IDA
SpoSPBC1685.02c
GO:0022627 cytosolic small ribosomal subunit C
IDA
SceS000005896
ISS
SpoSPBC1685.02c
SPCC962.04
GO:0003735 structural constituent of ribosome F
IDA
SceS000005896
ISS
SpoSPBC1685.02c
SPCC962.04
GO:0006412 translation P
IC
SceS000005896
ISS
SpoSPBC1685.02c
SPCC962.04

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Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk