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Search term: YPL002C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SNF8
SGD link S000005923
Alternative ID YPL002C
Description Component of the ESCRT-II complex, which is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression
Synonyms YPL002C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3341 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNA polymerase II transcription factor complex subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g31960 GI:15231986
Arabidopsis thaliana (Ath) At4g27040 GI:15236952
Caenorhabditis elegans (Cel) CE26875
(WBGene00016167)		 GI:17552332 Q18258
Drosophila melanogaster (Dme) 7300783 GI:7300783
Homo sapiens (Hsa) Hs21361380 GI:13633757
Homo sapiens (Hsa) Hs22045608 GI:22045608
Homo sapiens (Hsa) HsM6005755 GI:6005755
Saccharomyces cerevisiae (Sce) YPL002c
(S000005923)		 GI:6325255 Q12483
Schizosaccharomyces pombe (Spo) SPBC651.05c GI:19112295 O94663


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000814 ESCRT II complex C
IDA
SceS000005923
ISS
AthAt4g27040
SpoSPBC651.05c
GO:0005634 nucleus C
IDA
SpoSPBC651.05c
GO:0005829 cytosol C
IDA
SpoSPBC651.05c
GO:0003674 molecular_function F
ND
AthAt4g27040
SpoSPBC651.05c
GO:0005515 protein binding F
IDA
SceS000005923
GO:0000003 reproduction P
IMP
CelWBGene00016167
GO:0000433 negative regulation of transcription from RNA
polymerase II promoter by glucose		 P
IMP
SceS000005923
GO:0006623 protein targeting to vacuole P
IMP
SceS000005923
IPI
SceS000005923
GO:0007127 meiosis I P
TAS
SpoSPBC651.05c
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00016167
GO:0016192 vesicle-mediated transport P
ISS
AthAt4g27040
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016167
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000005923
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC651.05c
GO:0045141 meiotic telomere clustering P
IMP
SpoSPBC651.05c
GO:0045324 late endosome to vacuole transport P
IMP
SpoSPBC651.05c
GO:0051300 spindle pole body organization P
IMP
SpoSPBC651.05c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5239

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) SNF8 GI:21361380
Canis familiaris (Cfa) SNF8 GI:73966269
Mus musculus (Mmu) Snf8
(MGI:1343161)		 GI:15809002 Q9CZ28
Rattus norvegicus (Rno) Snf8
(RGD:1310144)		 GI:56119120
Gallus gallus (Gga) SNF8 GI:50760739
Drosophila melanogaster (Dme) CG6637
(FBgn0038908)		 GI:24648826
Anopheles gambiae (Aga) AgaP_AGAP000771 GI:31204723
Caenorhabditis elegans (Cel) C27F2.5
(CE26875;
WBGene00016167)		 GI:17552332 Q18258
Schizosaccharomyces pombe (Spo) dot2
(SPBC651.05c)		 GI:19112295 O94663
Saccharomyces cerevisiae (Sce) SNF8
(S000005923)		 GI:6325255 Q12483
Kluyveromyces lactis (Kla) KLLA0E14366g GI:50309179
Eremothecium gossypii (Ego) AGOS_AGL002C GI:45201094
Magnaporthe grisea (Mgr) MGG_05291 GI:145601969
Neurospora crassa (Ncr) NCU07843.1 GI:32416142
Arabidopsis thaliana (Ath) VPS22 GI:186514003
Oryza sativa (Osa) Os09g0529700 GI:115480301


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000814 ESCRT II complex C
IDA
SceS000005923
ISS
AthVPS22
SpoSPBC651.05c
GO:0005634 nucleus C
IDA
SpoSPBC651.05c
GO:0005667 transcription factor complex C
IDA
HsaSNF8
ISO
MmuMGI:1343161
GO:0005829 cytosol C
IDA
SpoSPBC651.05c
GO:0003674 molecular_function F
ND
AthVPS22
SpoSPBC651.05c
GO:0003702 RNA polymerase II transcription factor
activity		 F
TAS
HsaSNF8
GO:0005515 protein binding F
IDA
SceS000005923
GO:0008134 transcription factor binding F
IDA
HsaSNF8
ISO
MmuMGI:1343161
GO:0000003 reproduction P
IMP
CelWBGene00016167
GO:0000433 negative regulation of transcription from RNA
polymerase II promoter by glucose		 P
IMP
SceS000005923
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IDA
HsaSNF8
ISO
MmuMGI:1343161
GO:0006623 protein targeting to vacuole P
IMP
SceS000005923
IPI
SceS000005923
GO:0007127 meiosis I P
TAS
SpoSPBC651.05c
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00016167
GO:0016192 vesicle-mediated transport P
ISS
AthVPS22
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016167
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000005923
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC651.05c
GO:0045141 meiotic telomere clustering P
IMP
SpoSPBC651.05c
GO:0045324 late endosome to vacuole transport P
IMP
SpoSPBC651.05c
GO:0051300 spindle pole body organization P
IMP
SpoSPBC651.05c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3284

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga15439 ENSANGP00000017482
Ashbya gossypii (Ago) ago4309 AGL002C
Arabidopsis thaliana (Ath) ath20709 At4g27040.1
Caenorhabditis elegans (Cel) cel2868 C27F2.5
(CE26875;
WBGene00016167)
Candida glabrata (Cgl) cgl4472 CAGL0L09020g
Cryptococcus neoformans (Cne) cne1520 180.m02945
Dictyostelium discoideum (Ddi) ddi6853 DDB0185415
Debaryomyces hansenii (Dha) dha2668 DEHA0D08426g
Drosophila melanogaster (Dme) dme13748 CG6637-PA
(FBgn0038908)
Danio rerio (Dre) dre11957 ENSDARP00000008563
Takifugu rubripes (Fru) fru3565 SINFRUP00000140613
Gallus gallus (Gga) gga13806 ENSGALP00000001991
(SNF8)
Homo sapiens (Hsa) hsa13948 ENSP00000290330
(SNF8)		 Q96H20-1
Kluyveromyces lactis (Kla) kla3594 KLLA0E14366g
Mus musculus (Mmu) mmu4631 ENSMUSP00000006217
(MGI:1343161)		 Q9CZ28
Neurospora crassa (Ncr) ncr7639 NCU07843.2
Oryza sativa (Osa) osa50800 5921.m00154
Oryza sativa (Osa) osa52260 5998.m00169
Oryza sativa (Osa) osa52857 6117.m00130
Rattus norvegicus (Rno) rno5946 ENSRNOP00000008964
(RGD:1310144)		 Q5RK19
Saccharomyces cerevisiae (Sce) sce6156 YPL002C
(S000005923)
Schizosaccharomyces pombe (Spo) spo4906 SPBC651.05c O94663
Yarrowia lipolytica (Yli) yli1379 YALI0B15334g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000814 ESCRT II complex C
IDA
SceS000005923
ISS
AthAt4g27040
SpoSPBC651.05c
GO:0005634 nucleus C
IDA
SpoSPBC651.05c
GO:0005667 transcription factor complex C
ISO
MmuMGI:1343161
GO:0005829 cytosol C
IDA
SpoSPBC651.05c
GO:0003674 molecular_function F
ND
AthAt4g27040
SpoSPBC651.05c
GO:0005515 protein binding F
IDA
SceS000005923
GO:0008134 transcription factor binding F
ISO
MmuMGI:1343161
GO:0000003 reproduction P
IMP
CelWBGene00016167
GO:0000433 negative regulation of transcription from RNA
polymerase II promoter by glucose		 P
IMP
SceS000005923
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
ISO
MmuMGI:1343161
GO:0006623 protein targeting to vacuole P
IMP
SceS000005923
IPI
SceS000005923
GO:0007127 meiosis I P
TAS
SpoSPBC651.05c
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00016167
GO:0016192 vesicle-mediated transport P
ISS
AthAt4g27040
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016167
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000005923
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC651.05c
GO:0045141 meiotic telomere clustering P
IMP
SpoSPBC651.05c
GO:0045324 late endosome to vacuole transport P
IMP
SpoSPBC651.05c
GO:0051300 spindle pole body organization P
IMP
SpoSPBC651.05c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC651.05c
(O94663)		 YPL002C
(S000005923)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000814 ESCRT II complex C
IDA
SceS000005923
ISS
SpoSPBC651.05c
GO:0005634 nucleus C
IDA
SpoSPBC651.05c
GO:0005829 cytosol C
IDA
SpoSPBC651.05c
GO:0003674 molecular_function F
ND
SpoSPBC651.05c
GO:0005515 protein binding F
IDA
SceS000005923
GO:0000433 negative regulation of transcription from RNA
polymerase II promoter by glucose		 P
IMP
SceS000005923
GO:0006623 protein targeting to vacuole P
IMP
SceS000005923
IPI
SceS000005923
GO:0007127 meiosis I P
TAS
SpoSPBC651.05c
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IC
SceS000005923
GO:0043328 protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SpoSPBC651.05c
GO:0045141 meiotic telomere clustering P
IMP
SpoSPBC651.05c
GO:0045324 late endosome to vacuole transport P
IMP
SpoSPBC651.05c
GO:0051300 spindle pole body organization P
IMP
SpoSPBC651.05c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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