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Search term: YPL008W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CHL1
SGD link S000005929
Alternative ID YPL008W
Description Conserved nuclear protein required to establish sister-chromatid pairing during S-phase, probable DNA helicase with similarity to human BACH1, which associates with tumor suppressor BRCA1; associates with acetyltransferase Ctf7p
Synonyms YPL008W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1133 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Helicase of the DEAD superfamily

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g79890 GI:15220007
Caenorhabditis elegans (Cel) CE03493
(WBGene00010839)
GI:17554258
Drosophila melanogaster (Dme) 7290134
(FBgn0026876)
GI:18543219
Homo sapiens (Hsa) Hs13787197 GI:13787197
Homo sapiens (Hsa) Hs13787199 GI:13787199
Homo sapiens (Hsa) Hs13787200 GI:13787200
Homo sapiens (Hsa) Hs14765656 GI:14765656
Homo sapiens (Hsa) Hs22057889 GI:22057889
Saccharomyces cerevisiae (Sce) YPL008w
(S000005929)
GI:6325249 P22516
Schizosaccharomyces pombe (Spo) SPAC3G6.11 GI:19115889 O14147
Encephalitozoon cuniculi (Ecu) ECU08g1120 GI:19173439 Q8SRA9
Arabidopsis thaliana (Ath) At1g79890 GI:15220007
Caenorhabditis elegans (Cel) CE03493
(WBGene00010839)
GI:17554258
Drosophila melanogaster (Dme) 7290134
(FBgn0026876)
GI:18543219
Homo sapiens (Hsa) Hs13787197 GI:13787197
Homo sapiens (Hsa) Hs13787199 GI:13787199
Homo sapiens (Hsa) Hs13787200 GI:13787200
Homo sapiens (Hsa) Hs14765656 GI:14765656
Homo sapiens (Hsa) Hs22057889 GI:22057889
Saccharomyces cerevisiae (Sce) YPL008w
(S000005929)
GI:6325249 P22516
Schizosaccharomyces pombe (Spo) SPAC3G6.11 GI:19115889 O14147
Encephalitozoon cuniculi (Ecu) ECU08g1120 GI:19173439 Q8SRA9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPAC3G6.11
GO:0005634 nucleus C
IDA
SceS000005929
SpoSPAC3G6.11
ISS
SpoSPAC3G6.11
GO:0005829 cytosol C
IDA
SpoSPAC3G6.11
GO:0003678 DNA helicase activity F
IMP
SceS000005929
ISS
SceS000005929
GO:0004003 ATP-dependent DNA helicase activity F
ISS
DmeFBgn0026876
SpoSPAC3G6.11
GO:0004386 helicase activity F
ISS
DmeFBgn0026876
GO:0000003 reproduction P
IMP
CelWBGene00010839
GO:0006200 ATP catabolic process P
ISS
SpoSPAC3G6.11
GO:0006289 nucleotide-excision repair P
ISS
DmeFBgn0026876
GO:0006342 chromatin silencing P
NAS
SpoSPAC3G6.11
GO:0007059 chromosome segregation P
IDA
SceS000005929
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0007535 donor selection P
IGI
SceS000005929
IMP
SceS000005929
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00010839
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0051129 negative regulation of cellular component
organization
P
RCA
SceS000005929

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68973

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) DDX11 GI:100913202
Homo sapiens (Hsa) DDX12 GI:212549538
Pan troglodytes (Ptr) DDX11 GI:114645493
Canis familiaris (Cfa) DDX11 GI:73997803
Mus musculus (Mmu) Ddx11
(MGI:2443590)
GI:51491862 Q6AXC6
Rattus norvegicus (Rno) Ddx11 GI:109486411
Gallus gallus (Gga) DDX11 GI:118082962
Drosophila melanogaster (Dme) CG11403
(FBgn0026876)
GI:18543219
Anopheles gambiae (Aga) AgaP_AGAP001537 GI:158301911
Caenorhabditis elegans (Cel) M03C11.2
(CE03493;
WBGene00010839)
GI:17554258
Schizosaccharomyces pombe (Spo) SPAC3G6.11 GI:19115889 O14147
Saccharomyces cerevisiae (Sce) CHL1
(S000005929)
GI:6325249 P22516
Kluyveromyces lactis (Kla) KLLA0F27181g GI:50312507
Eremothecium gossypii (Ego) AGOS_AGL010W GI:45201086
Magnaporthe grisea (Mgr) MGG_13542 GI:145616206
Neurospora crassa (Ncr) NCU09298.1 GI:32423105
Arabidopsis thaliana (Ath) AT1G79890 GI:15220007
Oryza sativa (Osa) Os05g0219800 GI:115462687
Plasmodium falciparum (Pfa) MAL13P1.134 GI:124513258


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPAC3G6.11
GO:0005575 cellular_component C
ND
MmuMGI:2443590
GO:0005634 nucleus C
IDA
SceS000005929
SpoSPAC3G6.11
ISS
SpoSPAC3G6.11
GO:0005829 cytosol C
IDA
SpoSPAC3G6.11
GO:0016020 membrane C
ISS
PfaMAL13P1.134
GO:0003674 molecular_function F
ND
MmuMGI:2443590
GO:0003678 DNA helicase activity F
IMP
SceS000005929
ISS
SceS000005929
TAS
HsaDDX11
GO:0004003 ATP-dependent DNA helicase activity F
ISS
DmeFBgn0026876
SpoSPAC3G6.11
GO:0004386 helicase activity F
ISS
DmeFBgn0026876
TAS
HsaDDX11
GO:0000003 reproduction P
IMP
CelWBGene00010839
GO:0000070 mitotic sister chromatid segregation P
TAS
HsaDDX11
GO:0000084 S phase of mitotic cell cycle P
TAS
HsaDDX11
GO:0000086 G2/M transition of mitotic cell
cycle
P
TAS
HsaDDX11
GO:0006200 ATP catabolic process P
ISS
SpoSPAC3G6.11
GO:0006289 nucleotide-excision repair P
ISS
DmeFBgn0026876
GO:0006342 chromatin silencing P
NAS
SpoSPAC3G6.11
GO:0007059 chromosome segregation P
IDA
SceS000005929
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0007535 donor selection P
IGI
SceS000005929
IMP
SceS000005929
GO:0008150 biological_process P
ND
MmuMGI:2443590
GO:0008284 positive regulation of cell proliferation P
TAS
HsaDDX11
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00010839
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0051129 negative regulation of cellular component
organization
P
RCA
SceS000005929

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1634

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga3636 ENSANGP00000009606
Ashbya gossypii (Ago) ago4301 AGL010W
Arabidopsis thaliana (Ath) ath7365 At1g79890.1
Caenorhabditis elegans (Cel) cel12885 M03C11.2
(CE03493;
WBGene00010839)
Candida glabrata (Cgl) cgl4464 CAGL0L08844g
Cryptococcus neoformans (Cne) cne5029 186.m03953
Debaryomyces hansenii (Dha) dha111 DEHA0A02519g
Drosophila melanogaster (Dme) dme16020 CG11403-PA
(FBgn0026876)
Danio rerio (Dre) dre28481 ENSDARP00000025514
(LOC573545)
Encephalitozoon cuniculi (Ecu) ecu270 19173439
Takifugu rubripes (Fru) fru19948 SINFRUP00000129993
Takifugu rubripes (Fru) fru19945 SINFRUP00000129998
Takifugu rubripes (Fru) fru19947 SINFRUP00000166864
Takifugu rubripes (Fru) fru19946 SINFRUP00000171083
Gallus gallus (Gga) gga1214 ENSGALP00000021125
Gallus gallus (Gga) gga1215 ENSGALP00000021126
Gallus gallus (Gga) gga1210 ENSGALP00000021127
(DDX12)
Gallus gallus (Gga) gga1212 ENSGALP00000021129
Gallus gallus (Gga) gga1213 ENSGALP00000021130
Homo sapiens (Hsa) hsa7298 ENSP00000228264
(DDX11)
Q96FC9-2
Homo sapiens (Hsa) hsa7300 ENSP00000309965
(DDX11)
Q96FC9-4
Homo sapiens (Hsa) hsa7067 ENSP00000339557 A8MPP1
Kluyveromyces lactis (Kla) kla5289 KLLA0F27181g
Mus musculus (Mmu) mmu12039 ENSMUSP00000039225
(MGI:2443590)
Q6AXC6
Neurospora crassa (Ncr) ncr9064 NCU09298.2
Plasmodium falciparum (Pfa) pfa3875 MAL13P1.134
Rattus norvegicus (Rno) rno30593 ENSRNOP00000016536
(RGD:1306675)
Rattus norvegicus (Rno) rno30592 ENSRNOP00000016588
(RGD:1310196)
B2RYF7
Saccharomyces cerevisiae (Sce) sce6162 YPL008W
(S000005929)
Schizosaccharomyces pombe (Spo) spo2597 SPAC3G6.11 O14147
Yarrowia lipolytica (Yli) yli2671 YALI0C23639g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPAC3G6.11
GO:0005575 cellular_component C
ND
MmuMGI:2443590
GO:0005634 nucleus C
IDA
SceS000005929
SpoSPAC3G6.11
ISS
SpoSPAC3G6.11
GO:0005829 cytosol C
IDA
SpoSPAC3G6.11
GO:0016020 membrane C
ISS
PfaMAL13P1.134
GO:0003674 molecular_function F
ND
MmuMGI:2443590
GO:0003678 DNA helicase activity F
IMP
SceS000005929
ISS
SceS000005929
GO:0004003 ATP-dependent DNA helicase activity F
ISS
DmeFBgn0026876
SpoSPAC3G6.11
GO:0004386 helicase activity F
ISS
DmeFBgn0026876
GO:0000003 reproduction P
IMP
CelWBGene00010839
GO:0006200 ATP catabolic process P
ISS
SpoSPAC3G6.11
GO:0006289 nucleotide-excision repair P
ISS
DmeFBgn0026876
GO:0006342 chromatin silencing P
NAS
SpoSPAC3G6.11
GO:0007059 chromosome segregation P
IDA
SceS000005929
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0007535 donor selection P
IGI
SceS000005929
IMP
SceS000005929
GO:0008150 biological_process P
ND
MmuMGI:2443590
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00010839
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0051129 negative regulation of cellular component
organization
P
RCA
SceS000005929

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC3G6.11
(O14147)
YPL008W
(S000005929)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPAC3G6.11
GO:0005634 nucleus C
IDA
SceS000005929
SpoSPAC3G6.11
ISS
SpoSPAC3G6.11
GO:0005829 cytosol C
IDA
SpoSPAC3G6.11
GO:0003678 DNA helicase activity F
IMP
SceS000005929
ISS
SceS000005929
GO:0004003 ATP-dependent DNA helicase activity F
ISS
SpoSPAC3G6.11
GO:0006200 ATP catabolic process P
ISS
SpoSPAC3G6.11
GO:0006342 chromatin silencing P
NAS
SpoSPAC3G6.11
GO:0007059 chromosome segregation P
IDA
SceS000005929
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0007535 donor selection P
IGI
SceS000005929
IMP
SceS000005929
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000005929
IMP
SceS000005929
ISS
SpoSPAC3G6.11
GO:0051129 negative regulation of cellular component
organization
P
RCA
SceS000005929

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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