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Search term: YPL012W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRP12
SGD link S000005933
Alternative ID YPL012W
Description Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; contains HEAT-repeats
Synonyms YPL012W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1248 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g34350_2 GI:15226288
Arabidopsis thaliana (Ath) At4g23540 GI:15236523
Caenorhabditis elegans (Cel) CE27472
(WBGene00021595)		 GI:17555918 Q965N8
Drosophila melanogaster (Dme) 7292905 GI:7292905
Homo sapiens (Hsa) Hs15987121 GI:15987121
Saccharomyces cerevisiae (Sce) YPL012w
(S000005933)		 GI:6325245 Q12754
Schizosaccharomyces pombe (Spo) SPAPB8E5.07c GI:19115693 Q9C0X8
Schizosaccharomyces pombe (Spo) SPBC1105.01 GI:19113249 Q9Y824
Arabidopsis thaliana (Ath) At2g34350_2 GI:15226288
Arabidopsis thaliana (Ath) At4g23540 GI:15236523
Caenorhabditis elegans (Cel) CE27472
(WBGene00021595)		 GI:17555918 Q965N8
Drosophila melanogaster (Dme) 7292905 GI:7292905
Homo sapiens (Hsa) Hs15987121 GI:15987121
Saccharomyces cerevisiae (Sce) YPL012w
(S000005933)		 GI:6325245 Q12754
Schizosaccharomyces pombe (Spo) SPAPB8E5.07c GI:19115693 Q9C0X8
Schizosaccharomyces pombe (Spo) SPBC1105.01 GI:19113249 Q9Y824


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g23540
GO:0005634 nucleus C
IDA
SceS000005933
SpoSPAPB8E5.07c
SPBC1105.01
ISS
SpoSPBC1105.01
SPAPB8E5.07c
GO:0005816 spindle pole body C
IDA
SpoSPAPB8E5.07c
GO:0005840 ribosome C
TAS
SceS000005933
GO:0030686 90S preribosome C
IDA
SceS000005933
GO:0043234 protein complex C
NAS
SpoSPBC1105.01
SPAPB8E5.07c
GO:0003674 molecular_function F
ND
SceS000005933
SpoSPBC1105.01
SPAPB8E5.07c
GO:0000054 ribosomal subunit export from nucleus P
ISS
SpoSPAPB8E5.07c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
TAS
SceS000005933
GO:0008150 biological_process P
ND
AthAt4g23540
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPBC1105.01
GO:0042254 ribosome biogenesis P
TAS
SceS000005933

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
22370

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RRP12 GI:223278379
Pan troglodytes (Ptr) RRP12 GI:114632120
Canis familiaris (Cfa) RRP12 GI:73998480
Mus musculus (Mmu) Rrp12
(MGI:2147437)		 GI:40789092 Q3UJA1
Gallus gallus (Gga) RRP12 GI:61098352
Drosophila melanogaster (Dme) CG2691
(FBgn0030504)		 GI:24641825
Anopheles gambiae (Aga) AgaP_AGAP002961 GI:158290323
Caenorhabditis elegans (Cel) Y46E12BL.2
(CE27472;
WBGene00021595)		 GI:17555918 Q965N8
Schizosaccharomyces pombe (Spo) SPAPB8E5.07c GI:19115693 Q9C0X8
Saccharomyces cerevisiae (Sce) RRP12
(S000005933)		 GI:6325245 Q12754
Kluyveromyces lactis (Kla) KLLA0F27269g GI:50312515
Eremothecium gossypii (Ego) AGOS_AGL014C GI:45201082
Magnaporthe grisea (Mgr) MGG_01123 GI:145610553
Neurospora crassa (Ncr) NCU01675.1 GI:32415269
Arabidopsis thaliana (Ath) AT2G34357 GI:42571047
Oryza sativa (Osa) Os02g0782100 GI:115449069


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAT2G34357
MmuMGI:2147437
GO:0005634 nucleus C
IDA
SceS000005933
SpoSPAPB8E5.07c
ISS
SpoSPAPB8E5.07c
GO:0005816 spindle pole body C
IDA
SpoSPAPB8E5.07c
GO:0005840 ribosome C
TAS
SceS000005933
GO:0030686 90S preribosome C
IDA
SceS000005933
GO:0043234 protein complex C
NAS
SpoSPAPB8E5.07c
GO:0003674 molecular_function F
ND
MmuMGI:2147437
SceS000005933
SpoSPAPB8E5.07c
GO:0005515 protein binding F
IPI
HsaRRP12
GO:0000054 ribosomal subunit export from nucleus P
ISS
SpoSPAPB8E5.07c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
TAS
SceS000005933
GO:0008150 biological_process P
ND
AthAT2G34357
DmeFBgn0030504
MmuMGI:2147437
GO:0042254 ribosome biogenesis P
TAS
SceS000005933

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2384

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5209 ENSANGP00000010910
Ashbya gossypii (Ago) ago4297 AGL014C
Arabidopsis thaliana (Ath) ath10480 At2g34357.1
Caenorhabditis elegans (Cel) cel18990 Y46E12BL.2
(CE27472;
WBGene00021595)
Candida glabrata (Cgl) cgl4460 CAGL0L08756g
Cryptococcus neoformans (Cne) cne2658 183.m01594
Dictyostelium discoideum (Ddi) ddi5909 DDB0204738
Debaryomyces hansenii (Dha) dha5437 DEHA0F23573g
Drosophila melanogaster (Dme) dme17727 CG2691-PA
(FBgn0030504)
Danio rerio (Dre) dre4382 ENSDARP00000035419
(zgc:111822)		 Q4KMF4
Danio rerio (Dre) dre4380 ENSDARP00000045789
Danio rerio (Dre) dre4381 ENSDARP00000048370
Danio rerio (Dre) dre4379 ENSDARP00000050106
Takifugu rubripes (Fru) fru14721 SINFRUP00000151573
Takifugu rubripes (Fru) fru14720 SINFRUP00000151575
Gallus gallus (Gga) gga20726 ENSGALP00000012281
Gallus gallus (Gga) gga20727 ENSGALP00000012282
(RRP12)		 Q5ZKD5
Gallus gallus (Gga) gga20728 ENSGALP00000012283
Homo sapiens (Hsa) hsa4385 ENSP00000266051
Homo sapiens (Hsa) hsa4386 ENSP00000324315
(RRP12)		 Q5JTH9-2
Kluyveromyces lactis (Kla) kla5293 KLLA0F27269g
Mus musculus (Mmu) mmu13738 ENSMUSP00000039853
(MGI:2147437)		 Q6P5B0
Neurospora crassa (Ncr) ncr1629 NCU01675.2
Oryza sativa (Osa) osa7673 2551.m00080
Saccharomyces cerevisiae (Sce) sce6166 YPL012W
(S000005933)
Schizosaccharomyces pombe (Spo) spo3136 SPAPB8E5.07c Q9C0X8
Yarrowia lipolytica (Yli) yli4168 YALI0E07425g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAT2G34357
MmuMGI:2147437
GO:0005634 nucleus C
IDA
SceS000005933
SpoSPAPB8E5.07c
ISS
SpoSPAPB8E5.07c
GO:0005816 spindle pole body C
IDA
SpoSPAPB8E5.07c
GO:0005840 ribosome C
TAS
SceS000005933
GO:0030686 90S preribosome C
IDA
SceS000005933
GO:0043234 protein complex C
NAS
SpoSPAPB8E5.07c
GO:0003674 molecular_function F
ND
MmuMGI:2147437
SceS000005933
SpoSPAPB8E5.07c
GO:0000054 ribosomal subunit export from nucleus P
ISS
SpoSPAPB8E5.07c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
TAS
SceS000005933
GO:0008150 biological_process P
ND
AthAT2G34357
DmeFBgn0030504
MmuMGI:2147437
GO:0042254 ribosome biogenesis P
TAS
SceS000005933

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAPB8E5.07c
(Q9C0X8)		 YPL012W
(S000005933)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005933
SpoSPAPB8E5.07c
ISS
SpoSPAPB8E5.07c
GO:0005816 spindle pole body C
IDA
SpoSPAPB8E5.07c
GO:0005840 ribosome C
TAS
SceS000005933
GO:0030686 90S preribosome C
IDA
SceS000005933
GO:0043234 protein complex C
NAS
SpoSPAPB8E5.07c
GO:0003674 molecular_function F
ND
SceS000005933
SpoSPAPB8E5.07c
GO:0000054 ribosomal subunit export from nucleus P
ISS
SpoSPAPB8E5.07c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
TAS
SceS000005933
GO:0042254 ribosome biogenesis P
TAS
SceS000005933

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GO info in one table:

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