YOGY Home YOGY Help

Search term: YPL024W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RMI1
SGD link S000005945
Alternative ID YPL024W
Description Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex; stimulates superhelical relaxing and ssDNA binding activities of Top3p; involved in response to DNA damage; null mutants display increased rates of recombination and delayed S phase
Synonyms YPL024W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3683 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g19950 GI:15241222
Caenorhabditis elegans (Cel) CE12292
(WBGene00019712)
GI:17508329 P91399
Caenorhabditis elegans (Cel) CE13353_2 GI:17564040
Caenorhabditis elegans (Cel) CE26547
(WBGene00021748)
GI:17565906 Q965Q9
Drosophila melanogaster (Dme) 7294355 GI:7294355
Homo sapiens (Hsa) Hs13376427 GI:13376427
Homo sapiens (Hsa) Hs13540576
(TDRD3)
GI:13540576 Q9H7E2
Saccharomyces cerevisiae (Sce) YPL024w
(S000005945)
GI:6325233 Q02685
Schizosaccharomyces pombe (Spo) SPAC26A3.03c GI:19115058 Q10160


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0005737 cytoplasm C
IDA
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0005739 mitochondrion C
IDA
AthAt5g19950
GO:0031422 RecQ helicase-Topo III complex C
IDA
SceS000005945
SpoSPAC26A3.03c
IPI
SceS000005945
GO:0000400 four-way junction DNA binding F
IDA
SceS000005945
GO:0003697 single-stranded DNA binding F
IDA
SceS000005945
GO:0008047 enzyme activator activity F
IDA
SceS000005945
GO:0000003 reproduction P
IMP
CelWBGene00019712
GO:0006974 response to DNA damage stimulus P
IGI
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0007062 sister chromatid cohesion P
ISS
SpoSPAC26A3.03c
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005945
IMP
SceS000005945
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00019712
GO:0043388 positive regulation of DNA binding P
IDA
SceS000005945

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40481

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RMI1
(S000005945)
GI:6325233 Q02685
Kluyveromyces lactis (Kla) KLLA0D12166g GI:50307251
Eremothecium gossypii (Ego) AGOS_AFR458C GI:45198976


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005945
GO:0005737 cytoplasm C
IDA
SceS000005945
GO:0031422 RecQ helicase-Topo III complex C
IDA
SceS000005945
IPI
SceS000005945
GO:0000400 four-way junction DNA binding F
IDA
SceS000005945
GO:0003697 single-stranded DNA binding F
IDA
SceS000005945
GO:0008047 enzyme activator activity F
IDA
SceS000005945
GO:0006974 response to DNA damage stimulus P
IGI
SceS000005945
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005945
IMP
SceS000005945
GO:0043388 positive regulation of DNA binding P
IDA
SceS000005945

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17606

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago3650 AFR458C
Candida glabrata (Cgl) cgl3406 CAGL0J09482g
Debaryomyces hansenii (Dha) dha4821 DEHA0F09845g
Kluyveromyces lactis (Kla) kla2603 KLLA0D12166g
Neurospora crassa (Ncr) ncr9195 NCU09439.2
Saccharomyces cerevisiae (Sce) sce6178 YPL024W
(S000005945)
Schizosaccharomyces pombe (Spo) spo1481 SPAC26A3.03c Q10160


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0005737 cytoplasm C
IDA
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0031422 RecQ helicase-Topo III complex C
IDA
SceS000005945
SpoSPAC26A3.03c
IPI
SceS000005945
GO:0000400 four-way junction DNA binding F
IDA
SceS000005945
GO:0003697 single-stranded DNA binding F
IDA
SceS000005945
GO:0008047 enzyme activator activity F
IDA
SceS000005945
GO:0006974 response to DNA damage stimulus P
IGI
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0007062 sister chromatid cohesion P
ISS
SpoSPAC26A3.03c
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005945
IMP
SceS000005945
GO:0043388 positive regulation of DNA binding P
IDA
SceS000005945

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC26A3.03c
(Q10160)
YPL024W
(S000005945)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0005737 cytoplasm C
IDA
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0031422 RecQ helicase-Topo III complex C
IDA
SceS000005945
SpoSPAC26A3.03c
IPI
SceS000005945
GO:0000400 four-way junction DNA binding F
IDA
SceS000005945
GO:0003697 single-stranded DNA binding F
IDA
SceS000005945
GO:0008047 enzyme activator activity F
IDA
SceS000005945
GO:0006974 response to DNA damage stimulus P
IGI
SceS000005945
ISS
SpoSPAC26A3.03c
GO:0007062 sister chromatid cohesion P
ISS
SpoSPAC26A3.03c
GO:0007064 mitotic sister chromatid cohesion P
IGI
SceS000005945
IMP
SceS000005945
GO:0043388 positive regulation of DNA binding P
IDA
SceS000005945

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk