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Search term: YPL030W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRM44
SGD link S000005951
Alternative ID YPL030W
Description tRNA(Ser) Um(44) 2'-O-methyltransferase; involved in maintaining levels of the tRNA-Ser species tS(CGA) and tS(UGA); conserved among metazoans and fungi but there does not appear to be a homolog in plants; TRM44 is a non-essential gene
Synonyms YPL030W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3790 -CDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE04053 GI:17552266
Drosophila melanogaster (Dme) 7299200 GI:7299200
Homo sapiens (Hsa) Hs22044059 GI:22044059
Saccharomyces cerevisiae (Sce) YPL030w
(S000005951)		 GI:6325227 Q02648
Schizosaccharomyces pombe (Spo) SPCC663.10 GI:19075771 O74516


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC663.10
GO:0005737 cytoplasm C
IDA
SceS000005951
GO:0005829 cytosol C
IDA
SpoSPCC663.10
GO:0008168 methyltransferase activity F
ISS
SpoSPCC663.10
GO:0016300 tRNA (uracil) methyltransferase
activity		 F
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10
GO:0030488 tRNA methylation P
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31986

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPCC663.10 GI:19075771 O74516
Saccharomyces cerevisiae (Sce) TRM44
(S000005951)		 GI:6325227 Q02648
Kluyveromyces lactis (Kla) KLLA0D12012g GI:50307237
Eremothecium gossypii (Ego) AGOS_AGL241W GI:45200856
Neurospora crassa (Ncr) NCU01980.1 GI:32417384


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC663.10
GO:0005737 cytoplasm C
IDA
SceS000005951
GO:0005829 cytosol C
IDA
SpoSPCC663.10
GO:0008168 methyltransferase activity F
ISS
SpoSPCC663.10
GO:0016300 tRNA (uracil) methyltransferase
activity		 F
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10
GO:0030488 tRNA methylation P
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4004

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2110 ENSANGP00000002639
Ashbya gossypii (Ago) ago4071 AGL241W
Caenorhabditis elegans (Cel) cel2491 C23G10.7a
(CE38937;
WBGene00016014)
Caenorhabditis elegans (Cel) cel2492 C23G10.7b
(CE38938)
Candida glabrata (Cgl) cgl4616 CAGL0L12408g
Cryptococcus neoformans (Cne) cne4446 177.m03199
Dictyostelium discoideum (Ddi) ddi977 DDB0190192
Debaryomyces hansenii (Dha) dha2936 DEHA0D14278g
Drosophila melanogaster (Dme) dme11724 CG9386-PA
(FBgn0037708)
Danio rerio (Dre) dre31021 ENSDARP00000022817
Danio rerio (Dre) dre31022 ENSDARP00000039534
(zgc:101657)		 Q5XJR5
Takifugu rubripes (Fru) fru8547 SINFRUP00000158902
Takifugu rubripes (Fru) fru8548 SINFRUP00000167473
Gallus gallus (Gga) gga18357 ENSGALP00000025099
(C4orf23)
Homo sapiens (Hsa) hsa23905 ENSP00000285635
(C4orf23)		 Q8NA95
Homo sapiens (Hsa) hsa23904 ENSP00000315671
(C4orf23)		 Q8NA95
Kluyveromyces lactis (Kla) kla2596 KLLA0D12012g
Mus musculus (Mmu) mmu19987 ENSMUSP00000030980
(MGI:1926140)		 A7MCV4
Rattus norvegicus (Rno) rno10559 ENSRNOP00000011824
(RGD:1308380)
Saccharomyces cerevisiae (Sce) sce6184 YPL030W
(S000005951)
Schizosaccharomyces pombe (Spo) spo340 SPCC663.10 O74516
Yarrowia lipolytica (Yli) yli3765 YALI0D25212g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
DmeFBgn0037708
MmuMGI:1926140
GO:0005634 nucleus C
IDA
SpoSPCC663.10
GO:0005737 cytoplasm C
IDA
SceS000005951
GO:0005829 cytosol C
IDA
SpoSPCC663.10
GO:0003674 molecular_function F
ND
MmuMGI:1926140
GO:0008168 methyltransferase activity F
ISS
SpoSPCC663.10
GO:0016300 tRNA (uracil) methyltransferase
activity		 F
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10
GO:0008150 biological_process P
ND
DmeFBgn0037708
MmuMGI:1926140
GO:0030488 tRNA methylation P
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC663.10
(O74516)		 YPL030W
(S000005951)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC663.10
GO:0005737 cytoplasm C
IDA
SceS000005951
GO:0005829 cytosol C
IDA
SpoSPCC663.10
GO:0008168 methyltransferase activity F
ISS
SpoSPCC663.10
GO:0016300 tRNA (uracil) methyltransferase
activity		 F
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10
GO:0030488 tRNA methylation P
IDA
SceS000005951
IMP
SceS000005951
ISS
SpoSPCC663.10

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