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Search term: YPL047W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SGF11
SGD link S000005968
Alternative ID YPL047W
Description Integral subunit of SAGA histone acetyltransferase complex, regulates transcription of a subset of SAGA-regulated genes, required for the Ubp8p association with SAGA and for H2B deubiquitylation
Synonyms YPL047W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2612 A-D-Y--

KOGs classification KOGs description
POORLY CHARACTERIZED Predicted integral membrane protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g58570 GI:15237705
Drosophila melanogaster (Dme) 7293878 GI:7293878
Saccharomyces cerevisiae (Sce) YPL047w
(S000005968)		 GI:6325210 Q03067


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000005968
GO:0005634 nucleus C
IDA
SceS000005968
GO:0003674 molecular_function F
ND
SceS000005968
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IMP
SceS000005968
GO:0006473 protein amino acid acetylation P
RCA
SceS000005968
GO:0008150 biological_process P
ND
AthAt5g58570
GO:0016578 histone deubiquitination P
IMP
SceS000005968

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
49110

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SGF11
(S000005968)		 GI:6325210 Q03067
Kluyveromyces lactis (Kla) KLLA0D11682g GI:50307207


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000005968
GO:0005634 nucleus C
IDA
SceS000005968
GO:0003674 molecular_function F
ND
SceS000005968
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IMP
SceS000005968
GO:0006473 protein amino acid acetylation P
RCA
SceS000005968
GO:0016578 histone deubiquitination P
IMP
SceS000005968

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_5363

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3475 ENSANGP00000017477
Ashbya gossypii (Ago) ago4057 AGL255W
Arabidopsis thaliana (Ath) ath27912 At5g58575.1
Candida glabrata (Cgl) cgl4630 CAGL0L12738g
Debaryomyces hansenii (Dha) dha1196 DEHA0B11968g
Drosophila melanogaster (Dme) dme10109 CG13379-PA
(FBgn0036804)
Danio rerio (Dre) dre6049 ENSDARP00000015758
Danio rerio (Dre) dre17180 ENSDARP00000040706
(atxn7l3)		 Q8JFU1
Homo sapiens (Hsa) hsa13804 ENSP00000308316
Kluyveromyces lactis (Kla) kla2581 KLLA0D11682g
Mus musculus (Mmu) mmu4904 ENSMUSP00000072967
(MGI:3036270)		 A2AWT3-1
Oryza sativa (Osa) osa60716 6421.m00158
Rattus norvegicus (Rno) rno6209 ENSRNOP00000028407
(RGD:1311493)
Saccharomyces cerevisiae (Sce) sce6202 YPL047W
(S000005968)
Schizosaccharomyces pombe (Spo) spo3148 SPAC57A10.14 Q5FC18
Yarrowia lipolytica (Yli) yli607 YALI0A18315g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
DmeFBgn0036804
SceS000005968
ISS
SpoSPAC57A10.14
GO:0005575 cellular_component C
ND
AthAt5g58575
MmuMGI:3036270
GO:0005634 nucleus C
IDA
SceS000005968
GO:0003674 molecular_function F
ND
AthAt5g58575
MmuMGI:3036270
SceS000005968
SpoSPAC57A10.14
GO:0005515 protein binding F
IPI
DmeFBgn0036804
GO:0006338 chromatin remodeling P
IC
SpoSPAC57A10.14
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IMP
SceS000005968
GO:0006473 protein amino acid acetylation P
RCA
SceS000005968
GO:0007412 axon target recognition P
IMP
DmeFBgn0036804
GO:0008150 biological_process P
ND
AthAt5g58575
MmuMGI:3036270
GO:0008347 glial cell migration P
IMP
DmeFBgn0036804
GO:0016573 histone acetylation P
IC
SpoSPAC57A10.14
GO:0016578 histone deubiquitination P
IMP
DmeFBgn0036804
SceS000005968
ISS
SpoSPAC57A10.14
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
ISS
SpoSPAC57A10.14
GO:0045449 regulation of transcription P
IMP
DmeFBgn0036804

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC57A10.14
(Q5FC18)		 YPL047W
(S000005968)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000005968
ISS
SpoSPAC57A10.14
GO:0005634 nucleus C
IDA
SceS000005968
GO:0003674 molecular_function F
ND
SceS000005968
SpoSPAC57A10.14
GO:0006338 chromatin remodeling P
IC
SpoSPAC57A10.14
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IMP
SceS000005968
GO:0006473 protein amino acid acetylation P
RCA
SceS000005968
GO:0016573 histone acetylation P
IC
SpoSPAC57A10.14
GO:0016578 histone deubiquitination P
IMP
SceS000005968
ISS
SpoSPAC57A10.14
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
ISS
SpoSPAC57A10.14

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