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Search term: YPL085W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SEC16
SGD link S000006006
Alternative ID YPL085W
Description COPII vesicle coat protein required for ER transport vesicle budding; Sec16p is bound to the periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p
Synonyms YPL085W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1913 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Regucalcin gene promoter region-related protein (RGPR)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g47480 GI:15238106
Arabidopsis thaliana (Ath) At5g47490 GI:15238109
Caenorhabditis elegans (Cel) CE00411
(WBGene00013985)		 GI:17556955 P34643
Caenorhabditis elegans (Cel) CE04378 GI:17551624
Caenorhabditis elegans (Cel) CE27123 GI:17551622
Drosophila melanogaster (Dme) 7292784 GI:20129019
Homo sapiens (Hsa) Hs22046342 GI:22046342
Homo sapiens (Hsa) Hs14916477 GI:14916477
Saccharomyces cerevisiae (Sce) YPL085w
(S000006006)		 GI:6325172 P48415
Schizosaccharomyces pombe (Spo) SPAC29B12.07_2 GI:19115897 O14029


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g47480
At5g47490
GO:0005737 cytoplasm C
IDA
SpoSPAC29B12.07
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC29B12.07
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000006006
GO:0030127 COPII vesicle coat C
ISS
SpoSPAC29B12.07
GO:0003674 molecular_function F
ND
AthAt5g47480
SpoSPAC29B12.07
GO:0043495 protein anchor F
IDA
SceS000006006
GO:0006886 intracellular protein transport P
NAS
SpoSPAC29B12.07
GO:0006888 ER to Golgi vesicle-mediated transport P
RCA
SceS000006006
GO:0006901 vesicle coating P
ISS
SpoSPAC29B12.07
GO:0006914 autophagy P
ISS
SpoSPAC29B12.07
GO:0008150 biological_process P
ND
AthAt5g47480
At5g47490
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00013985
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC29B12.07
GO:0048208 COPII vesicle coating P
IDA
SceS000006006

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40457

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) sec16
(SPAC29B12.07)		 GI:19115897 O14029
Saccharomyces cerevisiae (Sce) SEC16
(S000006006)		 GI:6325172 P48415
Kluyveromyces lactis (Kla) KLLA0E23958g GI:50310031
Eremothecium gossypii (Ego) AGOS_AGR202W GI:45201298
Magnaporthe grisea (Mgr) MGG_12141 GI:145607197
Neurospora crassa (Ncr) NCU03819.1 GI:32405014


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC29B12.07
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC29B12.07
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000006006
GO:0030127 COPII vesicle coat C
ISS
SpoSPAC29B12.07
GO:0003674 molecular_function F
ND
SpoSPAC29B12.07
GO:0043495 protein anchor F
IDA
SceS000006006
GO:0006886 intracellular protein transport P
NAS
SpoSPAC29B12.07
GO:0006888 ER to Golgi vesicle-mediated transport P
RCA
SceS000006006
GO:0006901 vesicle coating P
ISS
SpoSPAC29B12.07
GO:0006914 autophagy P
ISS
SpoSPAC29B12.07
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC29B12.07
GO:0048208 COPII vesicle coating P
IDA
SceS000006006

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13162

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4513 AGR202W
Candida glabrata (Cgl) cgl2305 CAGL0H05577g
Cryptococcus neoformans (Cne) cne1940 181.m07913
Debaryomyces hansenii (Dha) dha808 DEHA0B02871g
Kluyveromyces lactis (Kla) kla4028 KLLA0E23958g
Neurospora crassa (Ncr) ncr3709 NCU03819.2
Saccharomyces cerevisiae (Sce) sce6241 YPL085W
(S000006006)
Schizosaccharomyces pombe (Spo) spo2187 SPAC29B12.07 O14029
Yarrowia lipolytica (Yli) yli1263 YALI0B12694g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC29B12.07
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC29B12.07
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000006006
GO:0030127 COPII vesicle coat C
ISS
SpoSPAC29B12.07
GO:0003674 molecular_function F
ND
SpoSPAC29B12.07
GO:0043495 protein anchor F
IDA
SceS000006006
GO:0006886 intracellular protein transport P
NAS
SpoSPAC29B12.07
GO:0006888 ER to Golgi vesicle-mediated transport P
RCA
SceS000006006
GO:0006901 vesicle coating P
ISS
SpoSPAC29B12.07
GO:0006914 autophagy P
ISS
SpoSPAC29B12.07
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC29B12.07
GO:0048208 COPII vesicle coating P
IDA
SceS000006006

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC29B12.07
(O14029)		 YPL085W
(S000006006)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC29B12.07
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPAC29B12.07
GO:0012507 ER to Golgi transport vesicle membrane C
IDA
SceS000006006
GO:0030127 COPII vesicle coat C
ISS
SpoSPAC29B12.07
GO:0003674 molecular_function F
ND
SpoSPAC29B12.07
GO:0043495 protein anchor F
IDA
SceS000006006
GO:0006886 intracellular protein transport P
NAS
SpoSPAC29B12.07
GO:0006888 ER to Golgi vesicle-mediated transport P
RCA
SceS000006006
GO:0006901 vesicle coating P
ISS
SpoSPAC29B12.07
GO:0006914 autophagy P
ISS
SpoSPAC29B12.07
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC29B12.07
GO:0048208 COPII vesicle coating P
IDA
SceS000006006

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