YOGY Home YOGY Help

Search term: YPL086C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ELP3
SGD link S000006007
Alternative ID YPL086C
Description Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA; exhibits histone acetyltransferase activity that is directed to histones H3 and H4; disruption confers resistance to K. lactis zymotoxin
Synonyms YPL086C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2535 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGINFORMATION STORAGE AND PROCESSING RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g50320 GI:9758914
Caenorhabditis elegans (Cel) CE15439 GI:17566948
Drosophila melanogaster (Dme) 7295707
(Elp3)
GI:19920684
Homo sapiens (Hsa) Hs21361689 GI:10434125 Q9H9T3
Homo sapiens (Hsa) HsM8922418 GI:8922418
Saccharomyces cerevisiae (Sce) YPL086c
(S000006007)
GI:6325171 Q02908
Schizosaccharomyces pombe (Spo) SPAC29A4.20 GI:19115774 O14023
Encephalitozoon cuniculi (Ecu) ECU08g1090 GI:19173436 Q8SUP3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000785 chromatin C
NAS
SpoSPAC29A4.20
GO:0005634 nucleus C
IDA
SceS000006007
GO:0005737 cytoplasm C
IDA
SceS000006007
SpoSPAC29A4.20
ISS
DmeElp3
GO:0005829 cytosol C
IDA
SpoSPAC29A4.20
GO:0008023 transcription elongation factor
complex
C
ISS
DmeElp3
GO:0033588 Elongator holoenzyme complex C
IDA
SceS000006007
ISS
SpoSPAC29A4.20
GO:0004402 histone acetyltransferase activity F
IDA
SceS000006007
ISS
AthAt5g50320
SceS000006007
SpoSPAC29A4.20
GO:0008607 phosphorylase kinase regulator
activity
F
ISS
DmeElp3
GO:0002098 tRNA wobble uridine modification P
IMP
SceS000006007
GO:0006325 chromatin organization P
NAS
SpoSPAC29A4.20
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
IMP
SceS000006007
ISS
DmeElp3
GO:0006399 tRNA metabolic process P
RCA
SceS000006007
GO:0006400 tRNA modification P
ISS
SpoSPAC29A4.20
GO:0008283 cell proliferation P
IMP
AthAt5g50320
GO:0009294 DNA mediated transformation P
IMP
AthAt5g50320
GO:0009451 RNA modification P
RCA
SceS000006007
GO:0016570 histone modification P
NAS
SpoSPAC29A4.20
GO:0035265 organ growth P
IMP
AthAt5g50320
GO:0045494 photoreceptor cell maintenance P
IMP
DmeElp3

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
7105

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ELP3 GI:23510283
Pan troglodytes (Ptr) ELP3 GI:114619479
Canis familiaris (Cfa) ELP3 GI:73993905
Mus musculus (Mmu) Elp3
(MGI:1921445)
GI:33469023 Q9CZX0
Gallus gallus (Gga) ELP3 GI:86129488
Drosophila melanogaster (Dme) Elp3 GI:19920684
Anopheles gambiae (Aga) AgaP_AGAP008300 GI:158296831
Caenorhabditis elegans (Cel) elpc-3
(CE40344;
WBGene00014123)
GI:133955098
Schizosaccharomyces pombe (Spo) SPAC29A4.20 GI:19115774 O14023
Saccharomyces cerevisiae (Sce) ELP3
(S000006007)
GI:6325171 Q02908
Kluyveromyces lactis (Kla) KLLA0E23980g GI:50310033
Eremothecium gossypii (Ego) AGOS_AGR201C GI:45201297
Magnaporthe grisea (Mgr) MGG_05481 GI:39941138
Neurospora crassa (Ncr) NCU01229.1 GI:32412484
Arabidopsis thaliana (Ath) ELO3 GI:18423134
Oryza sativa (Osa) Os04g0484900 GI:115459056
Plasmodium falciparum (Pfa) PFL1345c GI:124806266


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000785 chromatin C
NAS
SpoSPAC29A4.20
GO:0005634 nucleus C
IDA
SceS000006007
GO:0005737 cytoplasm C
IDA
SceS000006007
SpoSPAC29A4.20
ISS
DmeElp3
GO:0005829 cytosol C
IDA
SpoSPAC29A4.20
GO:0008023 transcription elongation factor
complex
C
ISS
DmeElp3
GO:0033588 Elongator holoenzyme complex C
IDA
SceS000006007
ISS
SpoSPAC29A4.20
GO:0004402 histone acetyltransferase activity F
IDA
SceS000006007
ISS
AthELO3
SceS000006007
SpoSPAC29A4.20
GO:0008607 phosphorylase kinase regulator
activity
F
ISS
DmeElp3
GO:0002098 tRNA wobble uridine modification P
IMP
CelWBGene00014123
SceS000006007
GO:0006325 chromatin organization P
NAS
SpoSPAC29A4.20
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
IMP
SceS000006007
ISS
DmeElp3
GO:0006399 tRNA metabolic process P
RCA
SceS000006007
GO:0006400 tRNA modification P
ISS
SpoSPAC29A4.20
GO:0006412 translation P
IMP
CelWBGene00014123
GO:0007283 spermatogenesis P
IGI
CelWBGene00014123
GO:0008283 cell proliferation P
IMP
AthELO3
GO:0008355 olfactory learning P
IMP
CelWBGene00014123
GO:0009294 DNA mediated transformation P
IMP
AthELO3
GO:0009451 RNA modification P
RCA
SceS000006007
GO:0016570 histone modification P
NAS
SpoSPAC29A4.20
GO:0035265 organ growth P
IMP
AthELO3
GO:0040025 vulval development P
IGI
CelWBGene00014123
GO:0045494 photoreceptor cell maintenance P
IMP
DmeElp3
GO:0048598 embryonic morphogenesis P
IGI
CelWBGene00014123
GO:0048599 oocyte development P
IGI
CelWBGene00014123

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1386

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga10283 ENSANGP00000024176
Ashbya gossypii (Ago) ago4512 AGR201C
Arabidopsis thaliana (Ath) ath26958 At5g50320.1
Caenorhabditis elegans (Cel) cel22303 ZK863.3
(CE40344;
WBGene00014123)
Candida glabrata (Cgl) cgl4934 CAGL0M06369g
Cryptococcus neoformans (Cne) cne3512 176.m02236
Dictyostelium discoideum (Ddi) ddi13173 DDB0231756
Debaryomyces hansenii (Dha) dha3074 DEHA0D17259g
Drosophila melanogaster (Dme) dme718 CG15433-PA
(FBgn0031604)
Danio rerio (Dre) dre12734 ENSDARP00000045130
Encephalitozoon cuniculi (Ecu) ecu267 19173436
Takifugu rubripes (Fru) fru31203 SINFRUP00000160862
Gallus gallus (Gga) gga16178 ENSGALP00000026781
(ELP3)
Q5ZHS1
Gallus gallus (Gga) gga16179 ENSGALP00000026782
Gallus gallus (Gga) gga16180 ENSGALP00000026783
Homo sapiens (Hsa) hsa30107 ENSP00000256398
(ELP3)
Q9H9T3-1
Kluyveromyces lactis (Kla) kla4029 KLLA0E23980g
Mus musculus (Mmu) mmu8390 ENSMUSP00000022609
(MGI:1921445)
Q9CZX0-2
Neurospora crassa (Ncr) ncr1192 NCU01229.2
Oryza sativa (Osa) osa13865 2955.m00055
Oryza sativa (Osa) osa80981 8116.m00153
Oryza sativa (Osa) osa84417 8270.m00110
Plasmodium falciparum (Pfa) pfa5052 PFL1345c
Rattus norvegicus (Rno) rno11566 ENSRNOP00000019262
Saccharomyces cerevisiae (Sce) sce6242 YPL086C
(S000006007)
Schizosaccharomyces pombe (Spo) spo4210 SPAC29A4.20 O14023
Yarrowia lipolytica (Yli) yli1262 YALI0B12628g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000785 chromatin C
NAS
SpoSPAC29A4.20
GO:0005634 nucleus C
IDA
SceS000006007
GO:0005737 cytoplasm C
IDA
SceS000006007
SpoSPAC29A4.20
ISS
DmeFBgn0031604
GO:0005829 cytosol C
IDA
SpoSPAC29A4.20
GO:0008023 transcription elongation factor
complex
C
ISS
DmeFBgn0031604
GO:0033588 Elongator holoenzyme complex C
IDA
SceS000006007
ISS
SpoSPAC29A4.20
GO:0004402 histone acetyltransferase activity F
IDA
SceS000006007
ISS
AthAt5g50320
SceS000006007
SpoSPAC29A4.20
GO:0008607 phosphorylase kinase regulator
activity
F
ISS
DmeFBgn0031604
GO:0002098 tRNA wobble uridine modification P
IMP
CelWBGene00014123
SceS000006007
GO:0006325 chromatin organization P
NAS
SpoSPAC29A4.20
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
IMP
SceS000006007
ISS
DmeFBgn0031604
GO:0006399 tRNA metabolic process P
RCA
SceS000006007
GO:0006400 tRNA modification P
ISS
SpoSPAC29A4.20
GO:0006412 translation P
IMP
CelWBGene00014123
GO:0007283 spermatogenesis P
IGI
CelWBGene00014123
GO:0008283 cell proliferation P
IMP
AthAt5g50320
GO:0008355 olfactory learning P
IMP
CelWBGene00014123
GO:0009294 DNA mediated transformation P
IMP
AthAt5g50320
GO:0009451 RNA modification P
RCA
SceS000006007
GO:0016570 histone modification P
NAS
SpoSPAC29A4.20
GO:0035265 organ growth P
IMP
AthAt5g50320
GO:0040025 vulval development P
IGI
CelWBGene00014123
GO:0045494 photoreceptor cell maintenance P
IMP
DmeFBgn0031604
GO:0048598 embryonic morphogenesis P
IGI
CelWBGene00014123
GO:0048599 oocyte development P
IGI
CelWBGene00014123

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC29A4.20
(O14023)
YPL086C
(S000006007)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000785 chromatin C
NAS
SpoSPAC29A4.20
GO:0005634 nucleus C
IDA
SceS000006007
GO:0005737 cytoplasm C
IDA
SceS000006007
SpoSPAC29A4.20
GO:0005829 cytosol C
IDA
SpoSPAC29A4.20
GO:0033588 Elongator holoenzyme complex C
IDA
SceS000006007
ISS
SpoSPAC29A4.20
GO:0004402 histone acetyltransferase activity F
IDA
SceS000006007
ISS
SceS000006007
SpoSPAC29A4.20
GO:0002098 tRNA wobble uridine modification P
IMP
SceS000006007
GO:0006325 chromatin organization P
NAS
SpoSPAC29A4.20
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
IMP
SceS000006007
GO:0006399 tRNA metabolic process P
RCA
SceS000006007
GO:0006400 tRNA modification P
ISS
SpoSPAC29A4.20
GO:0009451 RNA modification P
RCA
SceS000006007
GO:0016570 histone modification P
NAS
SpoSPAC29A4.20

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk