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Search term: YPL090C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS6A
SGD link S000006011
Alternative ID YPL090C
Description Protein component of the small (40S) ribosomal subunit; identical to Rps6Bp and has similarity to rat S6 ribosomal protein
Synonyms YPL090C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1646 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S6

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g31700 GI:15236042
Arabidopsis thaliana (Ath) At5g10360 GI:15238142
Caenorhabditis elegans (Cel) CE24592 GI:17508687 Q9NEN6
Drosophila melanogaster (Dme) 7290845 GI:7290845
Drosophila melanogaster (Dme) 7290846 GI:7290846 P29327
Homo sapiens (Hsa) Hs17158044 GI:6677809
Homo sapiens (Hsa) Hs17448285_2 GI:17448285
Homo sapiens (Hsa) Hs17458725 GI:17458725
Homo sapiens (Hsa) Hs17475469 GI:17475469
Homo sapiens (Hsa) Hs18579097 GI:18579097
Homo sapiens (Hsa) Hs20477770 GI:20477770
Homo sapiens (Hsa) Hs20533412_2 GI:20533412
Homo sapiens (Hsa) Hs20533870 GI:20533870
Homo sapiens (Hsa) Hs22045553 GI:22045553
Homo sapiens (Hsa) Hs22058488 GI:22058488
Homo sapiens (Hsa) Hs22058926_1 GI:22058926
Homo sapiens (Hsa) Hs22061530 GI:22061530
Saccharomyces cerevisiae (Sce) YBR181c
(S000000385)		 GI:6319658 P02365
Saccharomyces cerevisiae (Sce) YPL090c
(S000006011)		 GI:6325167 P02365
Schizosaccharomyces pombe (Spo) SPAC13G6.07c GI:19113745 P05752
Schizosaccharomyces pombe (Spo) SPAPB1E7.12 GI:19115050 Q9C0Z7
Encephalitozoon cuniculi (Ecu) ECU05g0670 GI:19173606 Q8SRY0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt4g31700
GO:0005737 cytoplasm C
IDA
SceS000000385
GO:0005829 cytosol C
IDA
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0005886 plasma membrane C
IDA
AthAt4g31700
At5g10360
GO:0009507 chloroplast C
IDA
AthAt4g31700
GO:0016020 membrane C
IDA
AthAt4g31700
GO:0022626 cytosolic ribosome C
IDA
AthAt4g31700
At5g10360
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt4g31700
At5g10360
SceS000006011
S000000385
ISS
AthAt5g10360
At4g31700
SpoSPAPB1E7.12
SPAC13G6.07c
GO:0030686 90S preribosome C
IDA
SceS000006011
GO:0032040 small-subunit processome C
IDA
SceS000000385
S000006011
GO:0003735 structural constituent of ribosome F
IDA
SceS000006011
S000000385
ISS
AthAt4g31700
At5g10360
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000006011
S000000385
GO:0006412 translation P
IC
SceS000000385
S000006011
ISS
AthAt4g31700
At5g10360
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt5g10360
GO:0040007 growth P
IGI
AthAt4g31700
At5g10360
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC13G6.07c
SPAPB1E7.12

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
85949

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS6 GI:17158044
Pan troglodytes (Ptr) RPS6 GI:114623995
Canis familiaris (Cfa) RPS6 GI:57093617
Mus musculus (Mmu) Rps6
(MGI:98159)		 GI:6677809 P62754
Mus musculus (Mmu) Gm13654 GI:94367038
Rattus norvegicus (Rno) Rps6
(RGD:3602)		 GI:8394224 44690
Gallus gallus (Gga) RPS6 GI:45382571
Drosophila melanogaster (Dme) RpS6
(FBgn0004922)		 GI:17737290
Anopheles gambiae (Aga) AgaP_AGAP002919 GI:158290384
Caenorhabditis elegans (Cel) rps-6 GI:17508687 Q9NEN6
Schizosaccharomyces pombe (Spo) rps6 GI:19115050
Schizosaccharomyces pombe (Spo) rps6-1
(SPAC13G6.07c)		 GI:19113745 P05752
Saccharomyces cerevisiae (Sce) RPS6A
(S000006011)		 GI:6325167 P02365
Saccharomyces cerevisiae (Sce) RPS6B
(S000000385)		 GI:6319658 P02365
Kluyveromyces lactis (Kla) KLLA0E24090g GI:50310043
Eremothecium gossypii (Ego) AGOS_AGR197C GI:45201293
Magnaporthe grisea (Mgr) MGG_03236 GI:39942312
Neurospora crassa (Ncr) NCU08502.1 GI:32418138
Arabidopsis thaliana (Ath) RPS6 GI:15236042
Arabidopsis thaliana (Ath) EMB3010 GI:15238142
Oryza sativa (Osa) Os03g0390000 GI:115453345
Oryza sativa (Osa) Os07g0622100 GI:115473429
Plasmodium falciparum (Pfa) PF13_0228 GI:124513570


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaRPS6
GO:0005730 nucleolus C
IDA
HsaRPS6
GO:0005737 cytoplasm C
IDA
MmuMGI:98159
SceS000000385
GO:0005829 cytosol C
EXP
HsaRPS6
IDA
SpoSPAC13G6.07c
GO:0005840 ribosome C
IDA
MmuMGI:98159
GO:0005844 polysome C
IDA
MmuMGI:98159
GO:0005886 plasma membrane C
IDA
AthEMB3010
GO:0015935 small ribosomal subunit C
IDA
HsaRPS6
GO:0022626 cytosolic ribosome C
IDA
AthEMB3010
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthEMB3010
HsaRPS6
SceS000006011
S000000385
ISO
MmuMGI:98159
ISS
AthEMB3010
PfaPF13_0228
SpoSPAC13G6.07c
NAS
HsaRPS6
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPS6
ISO
MmuMGI:98159
GO:0030686 90S preribosome C
IDA
SceS000006011
GO:0032040 small-subunit processome C
IDA
SceS000000385
S000006011
GO:0048471 perinuclear region of cytoplasm C
IDA
MmuMGI:98159
GO:0003735 structural constituent of ribosome F
IDA
SceS000006011
S000000385
ISO
MmuMGI:98159
ISS
AthEMB3010
SpoSPAC13G6.07c
GO:0005515 protein binding F
IPI
HsaRPS6
GO:0000028 ribosomal small subunit assembly P
ISO
MmuMGI:98159
GO:0000082 G1/S transition of mitotic cell
cycle		 P
IMP
MmuMGI:98159
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000006011
S000000385
GO:0001890 placenta development P
IMP
MmuMGI:98159
GO:0002309 T cell proliferation involved in immune
response		 P
IGI
MmuMGI:98159
IMP
MmuMGI:98159
GO:0006364 rRNA processing P
IMP
HsaRPS6
MmuMGI:98159
GO:0006412 translation P
IC
HsaRPS6
SceS000000385
S000006011
ISS
AthEMB3010
SpoSPAC13G6.07c
GO:0006414 translational elongation P
EXP
HsaRPS6
GO:0006924 activation-induced cell death of T
cells		 P
IMP
MmuMGI:98159
GO:0007067 mitosis P
IMP
MmuMGI:98159
GO:0007369 gastrulation P
IGI
MmuMGI:98159
IMP
MmuMGI:98159
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthEMB3010
GO:0022605 oogenesis stage P
IMP
MmuMGI:98159
GO:0031575 G1/S transition checkpoint P
IMP
MmuMGI:98159
GO:0031929 TOR signaling cascade P
IDA
HsaRPS6
GO:0033077 T cell differentiation in the thymus P
IGI
MmuMGI:98159
IMP
MmuMGI:98159
GO:0040007 growth P
IGI
AthEMB3010
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC13G6.07c
GO:0042274 ribosomal small subunit biogenesis P
IMP
HsaRPS6
MmuMGI:98159
GO:0042593 glucose homeostasis P
ISS
HsaRPS6
GO:0043065 positive regulation of apoptosis P
IDA
HsaRPS6
GO:0043066 negative regulation of apoptosis P
IMP
MmuMGI:98159
GO:0048821 erythrocyte development P
IMP
MmuMGI:98159

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_841

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5162 ENSANGP00000011100
Ashbya gossypii (Ago) ago4508 AGR197C
Arabidopsis thaliana (Ath) ath21250 At4g31700.1
Arabidopsis thaliana (Ath) ath23238 At5g10360.1
Caenorhabditis elegans (Cel) cel20514 Y71A12B.1
Candida glabrata (Cgl) cgl2308 CAGL0H05643g
Candida glabrata (Cgl) cgl4931 CAGL0M06303g
Cryptococcus neoformans (Cne) cne602 163.m06202
Dictyostelium discoideum (Ddi) ddi12537 DDB0230023
Debaryomyces hansenii (Dha) dha811 DEHA0B02937g
Drosophila melanogaster (Dme) dme16895 CG10944-PA
(FBgn0004922)
Drosophila melanogaster (Dme) dme16894 CG10944-PB
(FBgn0004922)
Drosophila melanogaster (Dme) dme16896 CG10944-PC
(FBgn0004922)
Danio rerio (Dre) dre28682 ENSDARP00000011148
(zgc:92237)		 Q6DHL6
Encephalitozoon cuniculi (Ecu) ecu1168 19173606
Takifugu rubripes (Fru) fru6076 SINFRUP00000141607
Gallus gallus (Gga) gga27756 ENSGALP00000024283
(RPS6)		 Q9PTD6
Homo sapiens (Hsa) hsa31060 ENSP00000346006
Kluyveromyces lactis (Kla) kla4034 KLLA0E24090g
Mus musculus (Mmu) mmu18377 ENSMUSP00000030218
Mus musculus (Mmu) mmu8500 ENSMUSP00000078768
Mus musculus (Mmu) mmu29062 ENSMUSP00000079050
Neurospora crassa (Ncr) ncr8284 NCU08502.2
Oryza sativa (Osa) osa3312 2014.m00105
Oryza sativa (Osa) osa26408 4120.m00165
Oryza sativa (Osa) osa32502 4487.m00141
Oryza sativa (Osa) osa84738 8364.m00152
Plasmodium falciparum (Pfa) pfa4412 PF13_0228
Rattus norvegicus (Rno) rno23383 ENSRNOP00000010383
(RGD:3602)		 P62755
Saccharomyces cerevisiae (Sce) sce448 YBR181C
(S000000385)
Saccharomyces cerevisiae (Sce) sce6246 YPL090C
(S000006011)
Schizosaccharomyces pombe (Spo) spo3357 SPAC13G6.07c P05752
Schizosaccharomyces pombe (Spo) spo3156 SPAPB1E7.12 Q9C0Z7
Yarrowia lipolytica (Yli) yli6131 YALI0F18766g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt4g31700
GO:0005737 cytoplasm C
IDA
SceS000000385
GO:0005829 cytosol C
IDA
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0005886 plasma membrane C
IDA
AthAt4g31700
At5g10360
GO:0009507 chloroplast C
IDA
AthAt4g31700
GO:0016020 membrane C
IDA
AthAt4g31700
GO:0022626 cytosolic ribosome C
IDA
AthAt4g31700
At5g10360
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt4g31700
At5g10360
SceS000006011
S000000385
ISS
AthAt5g10360
At4g31700
PfaPF13_0228
SpoSPAPB1E7.12
SPAC13G6.07c
GO:0030686 90S preribosome C
IDA
SceS000006011
GO:0032040 small-subunit processome C
IDA
SceS000000385
S000006011
GO:0003735 structural constituent of ribosome F
IDA
SceS000006011
S000000385
ISS
AthAt4g31700
At5g10360
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0000003 reproduction P
IMP
CelY71A12B.1
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000006011
S000000385
GO:0002119 nematode larval development P
IMP
CelY71A12B.1
GO:0006412 translation P
IC
SceS000000385
S000006011
ISS
AthAt4g31700
At5g10360
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0008340 determination of adult lifespan P
IMP
CelY71A12B.1
GO:0009408 response to heat P
IMP
CelY71A12B.1
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt5g10360
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelY71A12B.1
GO:0040007 growth P
IGI
AthAt4g31700
At5g10360
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC13G6.07c
SPAPB1E7.12

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAPB1E7.12
(Q9C0Z7)		 YPL090C
(S000006011)
SPAC13G6.07c
(P05752)		 YPL090C
(S000006011)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0022627 cytosolic small ribosomal subunit C
IDA
SceS000006011
ISS
SpoSPAPB1E7.12
SPAC13G6.07c
GO:0030686 90S preribosome C
IDA
SceS000006011
GO:0032040 small-subunit processome C
IDA
SceS000006011
GO:0003735 structural constituent of ribosome F
IDA
SceS000006011
ISS
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000006011
GO:0006412 translation P
IC
SceS000006011
ISS
SpoSPAC13G6.07c
SPAPB1E7.12
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC13G6.07c
SPAPB1E7.12

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