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Search term: YPL127C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HHO1
SGD link S000006048
Alternative ID YPL127C
Description Histone H1, a linker histone required for nucleosome packaging at restricted sites; suppresses DNA repair involving homologous recombination; not required for telomeric silencing, basal transcriptional repression, or efficient sporulation
Synonyms YPL127C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4012 -C-HY--

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Histone H1

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE04443
(WBGene00001854)		 GI:17567275 Q19743
Caenorhabditis elegans (Cel) CE07733
(WBGene00001856)		 GI:17505352 O01833
Caenorhabditis elegans (Cel) CE08476
(WBGene00001852)		 GI:17558328 Q18336
Caenorhabditis elegans (Cel) CE11442
(WBGene00001857)		 GI:17561710 O16277
Caenorhabditis elegans (Cel) CE12450
(WBGene00001898)		 GI:17569031 P10771
Caenorhabditis elegans (Cel) CE17421
(WBGene00001855)		 GI:17558136 O17536
Caenorhabditis elegans (Cel) CE26293
(WBGene00001853)		 GI:17544102
Homo sapiens (Hsa) Hs17462535 GI:17462535
Homo sapiens (Hsa) Hs18544823 GI:18544823
Homo sapiens (Hsa) Hs18594035 GI:18594035
Homo sapiens (Hsa) Hs20544168
(HIST1H1T)		 GI:20544168 P22492
Homo sapiens (Hsa) Hs4885371
(H1F0)		 GI:4885371 P07305
Homo sapiens (Hsa) Hs4885373
(HIST1H1A)		 GI:4885373 Q02539
Homo sapiens (Hsa) Hs4885375
(HIST1H1C)		 GI:4885375 P16403
Homo sapiens (Hsa) Hs4885377
(HIST1H1D)		 GI:4885377 P16402
Homo sapiens (Hsa) Hs4885379
(HIST1H1E)		 GI:4885379 P10412
Homo sapiens (Hsa) Hs4885381
(HIST1H1B)		 GI:4885381 Q14463
Homo sapiens (Hsa) Hs5174449
(H1FX)		 GI:5174449 Q92522
Homo sapiens (Hsa) Hs7705417 GI:7705417
Saccharomyces cerevisiae (Sce) YPL127c
(S000006048)		 GI:6325130 P53551


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
NAS
HsaHIST1H1D
HIST1H1C
HIST1H1E
HIST1H1B
H1FX
GO:0000788 nuclear nucleosome C
IPI
SceS000006048
GO:0005634 nucleus C
IDA
CelWBGene00001852
WBGene00001898
HsaH1F0
HIST1H1E
SceS000006048
GO:0005730 nucleolus C
IDA
CelWBGene00001852
GO:0005737 cytoplasm C
IDA
CelWBGene00001898
GO:0005794 Golgi apparatus C
IDA
HsaH1F0
GO:0015629 actin cytoskeleton C
IDA
HsaH1F0
GO:0045111 intermediate filament cytoskeleton C
IDA
CelWBGene00001852
GO:0003677 DNA binding F
IPI
SceS000006048
NAS
HsaHIST1H1D
HIST1H1B
HIST1H1C
HIST1H1E
H1FX
GO:0005515 protein binding F
IPI
HsaHIST1H1E
GO:0000003 reproduction P
IMP
CelWBGene00001855
WBGene00001898
GO:0002119 nematode larval development P
IMP
CelWBGene00001857
GO:0006334 nucleosome assembly P
NAS
HsaHIST1H1C
HIST1H1D
HIST1H1E
HIST1H1B
H1FX
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000006048
GO:0006974 response to DNA damage stimulus P
IMP
CelWBGene00001852
GO:0007126 meiosis P
IMP
CelWBGene00001856
GO:0007281 germ cell development P
IMP
CelWBGene00001898
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001857
WBGene00001898
GO:0018991 oviposition P
IMP
CelWBGene00001852
GO:0040007 growth P
IMP
CelWBGene00001857
GO:0040011 locomotion P
IMP
CelWBGene00001852
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00001856
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000006048
IMP
SceS000006048
GO:0051729 germline cell cycle switching, mitotic to meiotic
cell cycle		 P
IMP
CelWBGene00001898

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38028

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) H1F0 GI:4885371 P07305
Pan troglodytes (Ptr) LOC743278 GI:114686391
Canis familiaris (Cfa) LOC610251 GI:73969712
Mus musculus (Mmu) H1f0
(MGI:95893)		 GI:31560697 P10922
Rattus norvegicus (Rno) H1f0
(RGD:2777)		 GI:6981004 34023
Gallus gallus (Gga) H1F0 GI:113206128
Saccharomyces cerevisiae (Sce) HHO1
(S000006048)		 GI:6325130 P53551
Kluyveromyces lactis (Kla) KLLA0D06743g GI:50306771
Eremothecium gossypii (Ego) AGOS_ACR095W GI:45185781
Magnaporthe grisea (Mgr) MGG_12797 GI:145608528
Neurospora crassa (Ncr) NCU06863.1 GI:32413338


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000788 nuclear nucleosome C
IPI
SceS000006048
GO:0005634 nucleus C
IDA
HsaH1F0
MmuMGI:95893
SceS000006048
GO:0005794 Golgi apparatus C
IDA
HsaH1F0
GO:0015629 actin cytoskeleton C
IDA
HsaH1F0
GO:0003677 DNA binding F
IPI
SceS000006048
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000006048
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000006048
IMP
SceS000006048

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_336

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8236 ENSANGP00000008313
Anopheles gambiae (Aga) aga666 ENSANGP00000015704
Anopheles gambiae (Aga) aga665 ENSANGP00000015868
Anopheles gambiae (Aga) aga668 ENSANGP00000015869
Anopheles gambiae (Aga) aga7289 ENSANGP00000024235
Anopheles gambiae (Aga) aga7288 ENSANGP00000024262
Ashbya gossypii (Ago) ago1142 ACR095W
Arabidopsis thaliana (Ath) ath649 At1g06760.1
Arabidopsis thaliana (Ath) ath10046 At2g30620.1
Caenorhabditis elegans (Cel) cel464 B0414.3
(CE07733;
WBGene00001856)
Caenorhabditis elegans (Cel) cel2447 C18G1.5
(CE17421;
WBGene00001855)
Caenorhabditis elegans (Cel) cel7057 F22F1.1
(CE04443;
WBGene00001854)
Caenorhabditis elegans (Cel) cel11030 F59A7.4
(CE11442;
WBGene00001857)
Caenorhabditis elegans (Cel) cel13031 M163.3
(CE12450;
WBGene00001898)
Caenorhabditis elegans (Cel) cel20745 Y73B6BL.9a
(CE26293;
WBGene00001853)
Candida glabrata (Cgl) cgl4778 CAGL0M02783g
Cryptococcus neoformans (Cne) cne55 162.m02841
Cryptococcus neoformans (Cne) cne5598 179.m00460
Dictyostelium discoideum (Ddi) ddi13359 DDB0191459
Debaryomyces hansenii (Dha) dha2215 DEHA0C17710g
Drosophila melanogaster (Dme) dme3271 CG31617-PA
(FBgn0051617)
Danio rerio (Dre) dre18436 ENSDARP00000018748
Danio rerio (Dre) dre20914 ENSDARP00000034192
Danio rerio (Dre) dre26497 ENSDARP00000039658
Danio rerio (Dre) dre26513 ENSDARP00000039840
Danio rerio (Dre) dre30855 ENSDARP00000040112
Danio rerio (Dre) dre20903 ENSDARP00000041384
(LOC565341)
Danio rerio (Dre) dre5594 ENSDARP00000041694
Danio rerio (Dre) dre31199 ENSDARP00000042319
Danio rerio (Dre) dre20912 ENSDARP00000042832
Danio rerio (Dre) dre20913 ENSDARP00000044507
Danio rerio (Dre) dre29912 ENSDARP00000044717
Danio rerio (Dre) dre30840 ENSDARP00000045652
Danio rerio (Dre) dre26481 ENSDARP00000045976
Danio rerio (Dre) dre30830 ENSDARP00000046079
Danio rerio (Dre) dre26486 ENSDARP00000049134
(LOC570650)
Danio rerio (Dre) dre26583 ENSDARP00000049494
Danio rerio (Dre) dre30832 ENSDARP00000049713
Takifugu rubripes (Fru) fru27242 SINFRUP00000162008
Takifugu rubripes (Fru) fru18603 SINFRUP00000173818
Takifugu rubripes (Fru) fru16885 SINFRUP00000175530
Gallus gallus (Gga) gga727 ENSGALP00000019163
(LOC427882)		 P09987
Gallus gallus (Gga) gga739 ENSGALP00000019175
(LOC417948)		 P08286
Gallus gallus (Gga) gga749 ENSGALP00000019193
(LOC417954)		 P08284
Gallus gallus (Gga) gga753 ENSGALP00000019197
(HIST1H1C)
Gallus gallus (Gga) gga759 ENSGALP00000019205
(LOC427896)		 P08288
Gallus gallus (Gga) gga931 ENSGALP00000020094
(H1F0)		 P02259
Homo sapiens (Hsa) hsa26573 ENSP00000307705
(HIST1H1E)		 P10412
Homo sapiens (Hsa) hsa26641 ENSP00000330074
(HIST1H1B)		 P16401
Homo sapiens (Hsa) hsa21637 ENSP00000344504
(H1F0)		 P07305
Kluyveromyces lactis (Kla) kla2360 KLLA0D06743g
Mus musculus (Mmu) mmu6672 ENSMUSP00000044395
(MGI:107502)		 P43277
Mus musculus (Mmu) mmu6680 ENSMUSP00000057308
(MGI:1931527)		 P43274
Mus musculus (Mmu) mmu6612 ENSMUSP00000079356
(MGI:1861461)		 P43276
Neurospora crassa (Ncr) ncr6677 NCU06863.2
Oryza sativa (Osa) osa62632 6678.m00179
Oryza sativa (Osa) osa69167 6926.m00151
Rattus norvegicus (Rno) rno13358 ENSRNOP00000024304
(RGD:1590638)
Saccharomyces cerevisiae (Sce) sce6285 YPL127C
(S000006048)
Yarrowia lipolytica (Yli) yli1422 YALI0B16280g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
ISS
AthAt1g06760
At2g30620
GO:0000788 nuclear nucleosome C
IPI
SceS000006048
GO:0005634 nucleus C
IDA
CelWBGene00001898
SceS000006048
ISS
AthAt2g30620
DmeFBgn0051617
GO:0005730 nucleolus C
IDA
AthAt2g30620
GO:0005737 cytoplasm C
IDA
CelWBGene00001898
GO:0003677 DNA binding F
IDA
MmuMGI:1861461
MGI:107502
MGI:1931527
IPI
SceS000006048
ISS
AthAt2g30620
At1g06760
DmeFBgn0051617
GO:0005515 protein binding F
IPI
MmuMGI:107502
MGI:1861461
MGI:1931527
GO:0000003 reproduction P
IMP
CelWBGene00001855
WBGene00001898
GO:0002119 nematode larval development P
IMP
CelWBGene00001857
GO:0006333 chromatin assembly or disassembly P
ISS
DmeFBgn0051617
GO:0006334 nucleosome assembly P
ISS
AthAt1g06760
At2g30620
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000006048
GO:0007126 meiosis P
IMP
CelWBGene00001856
GO:0007281 germ cell development P
IMP
CelWBGene00001898
GO:0007517 muscle organ development P
IPI
MmuMGI:1861461
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001857
WBGene00001898
GO:0016584 nucleosome positioning P
IMP
MmuMGI:1931527
MGI:107502
GO:0040007 growth P
IMP
CelWBGene00001857
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00001856
GO:0045910 negative regulation of DNA recombination P
IGI
SceS000006048
IMP
SceS000006048
GO:0051729 germline cell cycle switching, mitotic to meiotic
cell cycle		 P
IMP
CelWBGene00001898

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GO info in one table:

s.khadayate@ucl.ac.uk