YOGY Home YOGY Help

Search term: YPL128C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TBF1
SGD link S000006049
Alternative ID YPL128C
Description Telobox-containing general regulatory factor; binds to TTAGGG repeats within subtelomeric anti-silencing regions (STARs) and possibly throughout the genome and mediates their insulating capacity by blocking silent chromatin propagation
Synonyms YPL128C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40439

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) trf1 GI:19112771
Saccharomyces cerevisiae (Sce) TBF1
(S000006049)		 GI:6325129
Kluyveromyces lactis (Kla) KLLA0D06765g GI:50306773
Eremothecium gossypii (Ego) AGOS_ACR096W GI:45185782


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IPI
SceS000006049
GO:0000784 nuclear chromosome, telomeric region C
TAS
SceS000006049
GO:0005634 nucleus C
IDA
SceS000006049
GO:0003677 DNA binding F
IPI
SceS000006049
GO:0003700 transcription factor activity F
TAS
SceS000006049
GO:0043035 chromatin insulator sequence binding F
IDA
SceS000006049
GO:0043565 sequence-specific DNA binding F
IDA
SceS000006049
GO:0006345 loss of chromatin silencing P
IDA
SceS000006049

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15314

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1143 ACR096W
Candida glabrata (Cgl) cgl4777 CAGL0M02761g
Debaryomyces hansenii (Dha) dha2209 DEHA0C17578g
Kluyveromyces lactis (Kla) kla2361 KLLA0D06765g
Neurospora crassa (Ncr) ncr3311 NCU03416.2
Saccharomyces cerevisiae (Sce) sce6286 YPL128C
(S000006049)
Schizosaccharomyces pombe (Spo) spo1056 SPBC19G7.13 Q6E434
Yarrowia lipolytica (Yli) yli1494 YALI0B18018g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IPI
SceS000006049
GO:0000781 chromosome, telomeric region C
IDA
SpoSPBC19G7.13
GO:0000784 nuclear chromosome, telomeric region C
TAS
SceS000006049
GO:0000790 nuclear chromatin C
IDA
SpoSPBC19G7.13
GO:0005634 nucleus C
IDA
SceS000006049
SpoSPBC19G7.13
GO:0003677 DNA binding F
IPI
SceS000006049
GO:0003691 double-stranded telomeric DNA binding F
IDA
SpoSPBC19G7.13
GO:0003700 transcription factor activity F
TAS
SceS000006049
GO:0030528 transcription regulator activity F
IMP
SpoSPBC19G7.13
GO:0043035 chromatin insulator sequence binding F
IDA
SceS000006049
GO:0043565 sequence-specific DNA binding F
IDA
SceS000006049
GO:0000723 telomere maintenance P
IMP
SpoSPBC19G7.13
GO:0006345 loss of chromatin silencing P
IDA
SceS000006049
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IMP
SpoSPBC19G7.13
GO:0007093 mitotic cell cycle checkpoint P
IMP
SpoSPBC19G7.13

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC19G7.13
(Q6E434)		 YPL128C
(S000006049)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IPI
SceS000006049
GO:0000781 chromosome, telomeric region C
IDA
SpoSPBC19G7.13
GO:0000784 nuclear chromosome, telomeric region C
TAS
SceS000006049
GO:0000790 nuclear chromatin C
IDA
SpoSPBC19G7.13
GO:0005634 nucleus C
IDA
SceS000006049
SpoSPBC19G7.13
GO:0003677 DNA binding F
IPI
SceS000006049
GO:0003691 double-stranded telomeric DNA binding F
IDA
SpoSPBC19G7.13
GO:0003700 transcription factor activity F
TAS
SceS000006049
GO:0030528 transcription regulator activity F
IMP
SpoSPBC19G7.13
GO:0043035 chromatin insulator sequence binding F
IDA
SceS000006049
GO:0043565 sequence-specific DNA binding F
IDA
SceS000006049
GO:0000723 telomere maintenance P
IMP
SpoSPBC19G7.13
GO:0006345 loss of chromatin silencing P
IDA
SceS000006049
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IMP
SpoSPBC19G7.13
GO:0007093 mitotic cell cycle checkpoint P
IMP
SpoSPBC19G7.13

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk