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Search term: YPL160W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CDC60
SGD link S000006081
Alternative ID YPL160W
Description Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA
Synonyms YPL160W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0437 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Leucyl-tRNA synthetase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g09620 GI:15217567
Caenorhabditis elegans (Cel) CE16317
(WBGene00003073)
GI:17554638 Q09996
Drosophila melanogaster (Dme) 7295794_1 GI:20129203
Homo sapiens (Hsa) Hs21918887 GI:7804450 Q9NVP8
Homo sapiens (Hsa) Hs7705497 GI:7705497
Homo sapiens (Hsa) HsM9910224 GI:9910224
Saccharomyces cerevisiae (Sce) YPL160w
(S000006081)
GI:6325097 P26637
Schizosaccharomyces pombe (Spo) SPAC26F1.13c GI:19115794 Q10490
Encephalitozoon cuniculi (Ecu) ECU06g0280 GI:19074278 Q8SRS8
Arabidopsis thaliana (Ath) At1g09620 GI:15217567
Caenorhabditis elegans (Cel) CE16317
(WBGene00003073)
GI:17554638 Q09996
Drosophila melanogaster (Dme) 7295794_1 GI:20129203
Homo sapiens (Hsa) Hs21918887 GI:7804450 Q9NVP8
Homo sapiens (Hsa) Hs7705497 GI:7705497
Homo sapiens (Hsa) HsM9910224 GI:9910224
Saccharomyces cerevisiae (Sce) YPL160w
(S000006081)
GI:6325097 P26637
Schizosaccharomyces pombe (Spo) SPAC26F1.13c GI:19115794 Q10490
Encephalitozoon cuniculi (Ecu) ECU06g0280 GI:19074278 Q8SRS8
Arabidopsis thaliana (Ath) At1g09620 GI:15217567
Caenorhabditis elegans (Cel) CE16317
(WBGene00003073)
GI:17554638 Q09996
Drosophila melanogaster (Dme) 7295794_1 GI:20129203
Homo sapiens (Hsa) Hs21918887 GI:7804450 Q9NVP8
Homo sapiens (Hsa) Hs7705497 GI:7705497
Homo sapiens (Hsa) HsM9910224 GI:9910224
Saccharomyces cerevisiae (Sce) YPL160w
(S000006081)
GI:6325097 P26637
Schizosaccharomyces pombe (Spo) SPAC26F1.13c GI:19115794 Q10490
Encephalitozoon cuniculi (Ecu) ECU06g0280 GI:19074278 Q8SRS8


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006081
ISS
SpoSPAC26F1.13c
GO:0005829 cytosol C
IDA
SpoSPAC26F1.13c
GO:0009507 chloroplast C
IDA
AthAt1g09620
GO:0004812 aminoacyl-tRNA ligase activity F
ISS
AthAt1g09620
GO:0004823 leucine-tRNA ligase activity F
IDA
SceS000006081
ISS
SpoSPAC26F1.13c
GO:0005524 ATP binding F
ISS
AthAt1g09620
GO:0000003 reproduction P
IMP
CelWBGene00003073
GO:0002119 nematode larval development P
IMP
CelWBGene00003073
GO:0006417 regulation of translation P
RCA
SceS000006081
GO:0006418 tRNA aminoacylation for protein
translation
P
ISS
AthAt1g09620
GO:0006429 leucyl-tRNA aminoacylation P
IDA
SceS000006081
ISS
SpoSPAC26F1.13c
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00003073
GO:0010171 body morphogenesis P
IMP
CelWBGene00003073
GO:0040007 growth P
IMP
CelWBGene00003073
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003073

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
7083

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) LARS GI:108773810
Pan troglodytes (Ptr) LARS GI:114602533
Canis familiaris (Cfa) LARS GI:57042751
Mus musculus (Mmu) Lars
(MGI:1913808)
GI:120537241 Q6ZPT2
Rattus norvegicus (Rno) Lars
(RGD:1304962)
GI:57526927
Gallus gallus (Gga) LARS GI:118097622
Drosophila melanogaster (Dme) CG33123
(FBgn0053123)
GI:28574733
Anopheles gambiae (Aga) AgaP_AGAP008297 GI:58389636
Caenorhabditis elegans (Cel) lrs-1
(CE16317;
WBGene00003073)
GI:17554638 Q09996
Schizosaccharomyces pombe (Spo) SPAC26F1.13c GI:19115794 Q10490
Saccharomyces cerevisiae (Sce) CDC60
(S000006081)
GI:6325097 P26637
Kluyveromyces lactis (Kla) KLLA0D06105g GI:50306721
Eremothecium gossypii (Ego) AGOS_AAL088W GI:45184736
Magnaporthe grisea (Mgr) MGG_02432 GI:145606256
Neurospora crassa (Ncr) NCU09463.1 GI:32418688
Arabidopsis thaliana (Ath) AT1G09620 GI:79339972
Oryza sativa (Osa) Os09g0378300 GI:115478909
Oryza sativa (Osa) Os09g0503400 GI:115479999
Plasmodium falciparum (Pfa) PFF1095w GI:86171431


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1913808
GO:0005737 cytoplasm C
IDA
SceS000006081
ISS
PfaPFF1095w
SpoSPAC26F1.13c
GO:0005829 cytosol C
EXP
HsaLARS
IDA
SpoSPAC26F1.13c
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0053123
GO:0009507 chloroplast C
IDA
AthAt1g09620
GO:0003674 molecular_function F
ND
MmuMGI:1913808
GO:0004812 aminoacyl-tRNA ligase activity F
ISS
AthAt1g09620
GO:0004823 leucine-tRNA ligase activity F
EXP
HsaLARS
IDA
SceS000006081
ISS
DmeFBgn0053123
PfaPFF1095w
SpoSPAC26F1.13c
GO:0005515 protein binding F
IPI
HsaLARS
GO:0005524 ATP binding F
ISS
AthAt1g09620
GO:0000003 reproduction P
IMP
CelWBGene00003073
GO:0002119 nematode larval development P
IMP
CelWBGene00003073
GO:0006417 regulation of translation P
RCA
SceS000006081
GO:0006418 tRNA aminoacylation for protein
translation
P
ISS
AthAt1g09620
GO:0006429 leucyl-tRNA aminoacylation P
IDA
SceS000006081
ISS
PfaPFF1095w
SpoSPAC26F1.13c
GO:0008150 biological_process P
ND
MmuMGI:1913808
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00003073
GO:0010171 body morphogenesis P
IMP
CelWBGene00003073
GO:0040007 growth P
IMP
CelWBGene00003073
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003073

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1568

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga10280 ENSANGP00000018304
Ashbya gossypii (Ago) ago99 AAL088W
Arabidopsis thaliana (Ath) ath987 At1g09620.1
Caenorhabditis elegans (Cel) cel14133 R74.1
(CE16317;
WBGene00003073)
Candida glabrata (Cgl) cgl3146 CAGL0J03652g
Cryptococcus neoformans (Cne) cne1632 164.m02132
Dictyostelium discoideum (Ddi) ddi12983 DDB0231253
Debaryomyces hansenii (Dha) dha4746 DEHA0F08228g
Drosophila melanogaster (Dme) dme603 CG33123-PA
(FBgn0053123)
Danio rerio (Dre) dre9787 ENSDARP00000003359
Encephalitozoon cuniculi (Ecu) ecu1505 19074278
Takifugu rubripes (Fru) fru12071 SINFRUP00000133223
Takifugu rubripes (Fru) fru12073 SINFRUP00000133226
Takifugu rubripes (Fru) fru12072 SINFRUP00000171550
Gallus gallus (Gga) gga6106 ENSGALP00000012100
(LARS)
Gallus gallus (Gga) gga6107 ENSGALP00000012101
Homo sapiens (Hsa) hsa25944 ENSP00000274562
(LARS)
B4DJ10
Kluyveromyces lactis (Kla) kla2333 KLLA0D06105g
Mus musculus (Mmu) mmu12627 ENSMUSP00000025370
Neurospora crassa (Ncr) ncr9215 NCU09463.2
Oryza sativa (Osa) osa18030 3328.m00108
Oryza sativa (Osa) osa21425 3601.m00256
Oryza sativa (Osa) osa57878 6244.m00050
Plasmodium falciparum (Pfa) pfa2958 PFF1095w
Rattus norvegicus (Rno) rno14070 ENSRNOP00000025284
(RGD:1304962)
Q5PPJ6
Saccharomyces cerevisiae (Sce) sce6320 YPL160W
(S000006081)
Schizosaccharomyces pombe (Spo) spo532 SPAC26F1.13c Q10490
Yarrowia lipolytica (Yli) yli4882 YALI0E24607g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006081
ISS
PfaPFF1095w
SpoSPAC26F1.13c
GO:0005829 cytosol C
IDA
SpoSPAC26F1.13c
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0053123
GO:0009507 chloroplast C
IDA
AthAt1g09620
GO:0004812 aminoacyl-tRNA ligase activity F
ISS
AthAt1g09620
GO:0004823 leucine-tRNA ligase activity F
IDA
SceS000006081
ISS
DmeFBgn0053123
PfaPFF1095w
SpoSPAC26F1.13c
GO:0005524 ATP binding F
ISS
AthAt1g09620
GO:0000003 reproduction P
IMP
CelWBGene00003073
GO:0002119 nematode larval development P
IMP
CelWBGene00003073
GO:0006417 regulation of translation P
RCA
SceS000006081
GO:0006418 tRNA aminoacylation for protein
translation
P
ISS
AthAt1g09620
GO:0006429 leucyl-tRNA aminoacylation P
IDA
SceS000006081
ISS
PfaPFF1095w
SpoSPAC26F1.13c
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00003073
GO:0010171 body morphogenesis P
IMP
CelWBGene00003073
GO:0040007 growth P
IMP
CelWBGene00003073
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003073

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC26F1.13c
(Q10490)
YPL160W
(S000006081)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006081
ISS
SpoSPAC26F1.13c
GO:0005829 cytosol C
IDA
SpoSPAC26F1.13c
GO:0004823 leucine-tRNA ligase activity F
IDA
SceS000006081
ISS
SpoSPAC26F1.13c
GO:0006417 regulation of translation P
RCA
SceS000006081
GO:0006429 leucyl-tRNA aminoacylation P
IDA
SceS000006081
ISS
SpoSPAC26F1.13c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk