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Search term: YPL183C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTT10
SGD link S000006104
Alternative ID YPL183C
Description Cytoplasmic protein with a role in regulation of Ty1 transposition
Synonyms YPL183C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0974 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED WD-repeat protein WDR6, WD repeat superfamily

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g01860 GI:15234356
Caenorhabditis elegans (Cel) CE19226
(WBGene00013204)		 GI:17510287 Q9XWF9
Drosophila melanogaster (Dme) 7293127_1 GI:7293127
Homo sapiens (Hsa) Hs11072093 GI:11072093
Homo sapiens (Hsa) Hs16554631 GI:16554631
Homo sapiens (Hsa) Hs16554633 GI:16554633
Saccharomyces cerevisiae (Sce) YPL183c
(S000006104)		 GI:6325074 Q08924
Schizosaccharomyces pombe (Spo) SPBC1306.02 GI:19112265 Q9USZ0
Arabidopsis thaliana (Ath) At4g01860 GI:15234356
Caenorhabditis elegans (Cel) CE19226
(WBGene00013204)		 GI:17510287 Q9XWF9
Drosophila melanogaster (Dme) 7293127_1 GI:7293127
Homo sapiens (Hsa) Hs11072093 GI:11072093
Homo sapiens (Hsa) Hs16554631 GI:16554631
Homo sapiens (Hsa) Hs16554633 GI:16554633
Saccharomyces cerevisiae (Sce) YPL183c
(S000006104)		 GI:6325074 Q08924
Schizosaccharomyces pombe (Spo) SPBC1306.02 GI:19112265 Q9USZ0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1306.02
GO:0005737 cytoplasm C
IDA
SceS000006104
GO:0005829 cytosol C
IDA
SpoSPBC1306.02
GO:0043234 protein complex C
NAS
SpoSPBC1306.02
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt4g01860
GO:0000166 nucleotide binding F
ISS
AthAt4g01860
GO:0003674 molecular_function F
ND
SceS000006104
SpoSPBC1306.02
GO:0008150 biological_process P
ND
AthAt4g01860
SceS000006104
SpoSPBC1306.02

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117926

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC1306.02 GI:19112265 Q9USZ0
Saccharomyces cerevisiae (Sce) RTT10
(S000006104)		 GI:6325074 Q08924
Kluyveromyces lactis (Kla) KLLA0E18986g GI:50309587
Eremothecium gossypii (Ego) AGOS_AFL056C GI:45198463
Magnaporthe grisea (Mgr) MGG_00151 GI:39975405
Neurospora crassa (Ncr) NCU07492.1 GI:32414597


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1306.02
GO:0005737 cytoplasm C
IDA
SceS000006104
GO:0005829 cytosol C
IDA
SpoSPBC1306.02
GO:0043234 protein complex C
NAS
SpoSPBC1306.02
GO:0003674 molecular_function F
ND
SceS000006104
SpoSPBC1306.02
GO:0008150 biological_process P
ND
SceS000006104
SpoSPBC1306.02

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_5032

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7098 ENSANGP00000011736
Ashbya gossypii (Ago) ago3137 AFL056C
Arabidopsis thaliana (Ath) ath18052 At4g01860.1
Arabidopsis thaliana (Ath) ath18053 At4g01860.2
Candida glabrata (Cgl) cgl477 CAGL0C01441g
Debaryomyces hansenii (Dha) dha285 DEHA0A06391g
Drosophila melanogaster (Dme) dme18006 CG33172-PA
(FBgn0053172)
Takifugu rubripes (Fru) fru7316 SINFRUP00000139262
Gallus gallus (Gga) gga5357 ENSGALP00000011222
Homo sapiens (Hsa) hsa22459 ENSP00000324158
(WDR6)		 Q9NNW5
Kluyveromyces lactis (Kla) kla3804 KLLA0E18986g
Mus musculus (Mmu) mmu28305 ENSMUSP00000070927
(MGI:1930140)		 Q3TEZ2
Neurospora crassa (Ncr) ncr7293 NCU07492.2
Oryza sativa (Osa) osa70880 6989.m00154
Rattus norvegicus (Rno) rno29291 ENSRNOP00000027411
(RGD:1307649)		 Q5XFW6
Saccharomyces cerevisiae (Sce) sce6343 YPL183C
(S000006104)
Schizosaccharomyces pombe (Spo) spo2070 SPBC1306.02 Q9USZ0
Yarrowia lipolytica (Yli) yli3669 YALI0D23001g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1930140
GO:0005634 nucleus C
IDA
SpoSPBC1306.02
GO:0005737 cytoplasm C
IDA
SceS000006104
GO:0005829 cytosol C
IDA
SpoSPBC1306.02
GO:0043234 protein complex C
NAS
SpoSPBC1306.02
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt4g01860
GO:0000166 nucleotide binding F
ISS
AthAt4g01860
GO:0003674 molecular_function F
ND
MmuMGI:1930140
SceS000006104
SpoSPBC1306.02
GO:0008150 biological_process P
ND
AthAt4g01860
MmuMGI:1930140
SceS000006104
SpoSPBC1306.02

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC1306.02
(Q9USZ0)		 YPL183C
(S000006104)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC1306.02
GO:0005737 cytoplasm C
IDA
SceS000006104
GO:0005829 cytosol C
IDA
SpoSPBC1306.02
GO:0043234 protein complex C
NAS
SpoSPBC1306.02
GO:0003674 molecular_function F
ND
SceS000006104
SpoSPBC1306.02
GO:0008150 biological_process P
ND
SceS000006104
SpoSPBC1306.02

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GO info in one table:

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