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Search term: YPL183W-A


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTC6
SGD link S000007224
Alternative ID YPL183W-A
Description Homolog of the prokaryotic ribosomal protein L36, likely to be a mitochondrial ribosomal protein coded in the nuclear genome; null mutation suppresses cdc13-1 temperature sensitivity
Synonyms YPL183W-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4122 A-DHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Mitochondrial/chloroplast ribosomal protein L36

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g20180 GI:15241288
Arabidopsis thaliana (Ath) AtCh056 GI:7525067 P62117
Drosophila melanogaster (Dme) 7295159_2 GI:7295159
Homo sapiens (Hsa) Hs20806105 GI:14728312
Saccharomyces cerevisiae (Sce) YPL183w-a
(S000007224)
GI:6325073 O14464
Schizosaccharomyces pombe (Spo) SPBC83.06c GI:19112430 O94690


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SpoSPBC83.06c
GO:0005762 mitochondrial large ribosomal subunit C
ISA
SceS000007224
ISS
SpoSPBC83.06c
GO:0005840 ribosome C
ISS
AthAt5g20180
GO:0003735 structural constituent of ribosome F
ISA
SceS000007224
ISS
AthAt5g20180
SpoSPBC83.06c
GO:0006412 translation P
ISS
SpoSPBC83.06c
GO:0032543 mitochondrial translation P
ISA
SceS000007224
NAS
SpoSPBC83.06c
GO:0042254 ribosome biogenesis P
ISS
AthAt5g20180

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2993

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga1370 ENSANGP00000014147
Ashbya gossypii (Ago) ago3136 AFL057W
Arabidopsis thaliana (Ath) ath24300 At5g20180.1
Arabidopsis thaliana (Ath) ath24301 At5g20180.2
Caenorhabditis elegans (Cel) cel12661 K11H3.6
(CE34934;
WBGene00010783)
Cryptococcus neoformans (Cne) cne3700 176.m02440
Dictyostelium discoideum (Ddi) ddi5910 DDB0204739
Debaryomyces hansenii (Dha) dha170 DEHA0A03817g
Drosophila melanogaster (Dme) dme8491 CG18767-PA
(FBgn0042112)
Escherichia coli (Eco) eco3181 16131178
Homo sapiens (Hsa) hsa25007 ENSP00000306151
Kluyveromyces lactis (Kla) kla3805 KLLA0E19008g
Mus musculus (Mmu) mmu7236 ENSMUSP00000022098
(MGI:2137228)
Q99N90
Neurospora crassa (Ncr) ncr5868 NCU06038.2
Oryza sativa (Osa) osa66938 6835.m00144
Rattus norvegicus (Rno) rno12819 ENSRNOP00000032662
(RGD:1306375)
B2RZ39
Saccharomyces cerevisiae (Sce) sce6344 YPL183W-A
(S000007224)
Schizosaccharomyces pombe (Spo) spo3961 SPBC83.06c O94690


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
MmuMGI:2137228
SpoSPBC83.06c
GO:0005762 mitochondrial large ribosomal subunit C
IDA
MmuMGI:2137228
ISA
SceS000007224
ISS
DmeFBgn0042112
SpoSPBC83.06c
GO:0005840 ribosome C
ISS
AthAt5g20180
GO:0003674 molecular_function F
ND
MmuMGI:2137228
GO:0003735 structural constituent of ribosome F
ISA
SceS000007224
ISS
AthAt5g20180
DmeFBgn0042112
SpoSPBC83.06c
GO:0006412 translation P
ISS
SpoSPBC83.06c
TAS
MmuMGI:2137228
GO:0032543 mitochondrial translation P
ISA
SceS000007224
NAS
SpoSPBC83.06c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00010783
GO:0042254 ribosome biogenesis P
ISS
AthAt5g20180

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC83.06c
(O94690)
YPL183W-A
(S000007224)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SpoSPBC83.06c
GO:0005762 mitochondrial large ribosomal subunit C
ISA
SceS000007224
ISS
SpoSPBC83.06c
GO:0003735 structural constituent of ribosome F
ISA
SceS000007224
ISS
SpoSPBC83.06c
GO:0006412 translation P
ISS
SpoSPBC83.06c
GO:0032543 mitochondrial translation P
ISA
SceS000007224
NAS
SpoSPBC83.06c

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