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Search term: YPL198W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL7B
SGD link S000006119
Alternative ID YPL198W
Description Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarity to E. coli L30 and rat L7 ribosomal proteins; contains a conserved C-terminal Nucleic acid Binding Domain (NDB2)
Synonyms YPL198W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3184 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60S ribosomal protein L7

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g80750 GI:15220825
Arabidopsis thaliana (Ath) At2g01250 GI:15226212
Arabidopsis thaliana (Ath) At2g44120 GI:15224824
Arabidopsis thaliana (Ath) At3g13580 GI:15231288
Caenorhabditis elegans (Cel) CE11024
(WBGene00004418)
GI:17507559 O01802
Drosophila melanogaster (Dme) 7297615 GI:13124809
Drosophila melanogaster (Dme) 7297909 GI:7297909
Homo sapiens (Hsa) Hs13649740 GI:13649740
Homo sapiens (Hsa) Hs15431301
(RPL7)
GI:15431301 P18124
Homo sapiens (Hsa) Hs17435391 GI:17435391
Homo sapiens (Hsa) Hs17436553 GI:17436553
Homo sapiens (Hsa) Hs17438700 GI:17438700
Homo sapiens (Hsa) Hs17439312 GI:17439312
Homo sapiens (Hsa) Hs17447155 GI:17447155
Homo sapiens (Hsa) Hs17452755 GI:17452755
Homo sapiens (Hsa) Hs17454008 GI:17454008
Homo sapiens (Hsa) Hs17456022 GI:17456022
Homo sapiens (Hsa) Hs17456110 GI:17456110
Homo sapiens (Hsa) Hs17475562 GI:17475562
Homo sapiens (Hsa) Hs17475750 GI:17475750
Homo sapiens (Hsa) Hs17482504 GI:17482504
Homo sapiens (Hsa) Hs17486085 GI:17486085
Homo sapiens (Hsa) Hs18544441 GI:18544441
Homo sapiens (Hsa) Hs18552827 GI:18552827
Homo sapiens (Hsa) Hs18581169 GI:18581169
Homo sapiens (Hsa) Hs18586190 GI:18586190
Homo sapiens (Hsa) Hs18594828 GI:18594828
Homo sapiens (Hsa) Hs18595820 GI:18595820
Homo sapiens (Hsa) Hs18599429 GI:18599429
Homo sapiens (Hsa) Hs18602998 GI:18602998
Homo sapiens (Hsa) Hs18604030 GI:18604030
Homo sapiens (Hsa) Hs20471558 GI:20471558
Homo sapiens (Hsa) Hs20476354 GI:20476354
Homo sapiens (Hsa) Hs20533158 GI:20533158
Homo sapiens (Hsa) Hs20536926 GI:20536926
Homo sapiens (Hsa) Hs20537431 GI:20537431
Homo sapiens (Hsa) Hs20539610 GI:20539610
Homo sapiens (Hsa) Hs20542559 GI:20542559
Homo sapiens (Hsa) Hs20545549 GI:20545549
Homo sapiens (Hsa) Hs20550426 GI:20550426
Homo sapiens (Hsa) Hs20551897 GI:20551897
Homo sapiens (Hsa) Hs20555186 GI:20555186
Homo sapiens (Hsa) Hs20555640 GI:20555640
Homo sapiens (Hsa) Hs22042096 GI:22042096
Homo sapiens (Hsa) Hs22042125 GI:22042125
Homo sapiens (Hsa) Hs22042139_3 GI:22042139
Homo sapiens (Hsa) Hs22050300 GI:22050300
Homo sapiens (Hsa) Hs22055184 GI:22055184
Homo sapiens (Hsa) Hs22055841 GI:22055841
Homo sapiens (Hsa) Hs22057886 GI:22057886
Homo sapiens (Hsa) Hs22058429 GI:22058429
Homo sapiens (Hsa) Hs22059586 GI:22059586
Homo sapiens (Hsa) Hs22062310 GI:22062310
Homo sapiens (Hsa) Hs22063265 GI:22063265
Homo sapiens (Hsa) Hs22064026 GI:22064026
Homo sapiens (Hsa) Hs22064401 GI:22064401
Homo sapiens (Hsa) Hs22068585 GI:22068585
Homo sapiens (Hsa) Hs22069283 GI:22069283
Saccharomyces cerevisiae (Sce) YGL076c
(S000003044)
GI:6321362 P05737
Saccharomyces cerevisiae (Sce) YNL002c
(S000004947)
GI:6324326 P40693
Saccharomyces cerevisiae (Sce) YPL198w
(S000006119)
GI:6325058 Q12213
Schizosaccharomyces pombe (Spo) SPAC3H5.07 GI:19115097 P25457
Schizosaccharomyces pombe (Spo) SPAC664.06 GI:19114366 P17937
Schizosaccharomyces pombe (Spo) SPBC18H10.12c GI:19112528 O60143
Encephalitozoon cuniculi (Ecu) ECU03g0950 GI:19173053 Q8SS93


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g01250
GO:0005634 nucleus C
IDA
SpoSPBC18H10.12c
GO:0005730 nucleolus C
IDA
AthAt1g80750
At2g44120
SceS000006119
S000004947
SpoSPAC3H5.07
SPBC18H10.12c
SPAC664.06
GO:0005737 cytoplasm C
IDA
SceS000006119
S000003044
SpoSPAC3H5.07
GO:0005773 vacuole C
IDA
AthAt2g01250
At2g44120
GO:0005829 cytosol C
EXP
HsaRPL7
GO:0005886 plasma membrane C
IDA
AthAt2g01250
GO:0009507 chloroplast C
IDA
AthAt2g44120
At2g01250
At3g13580
GO:0015934 large ribosomal subunit C
ISS
AthAt2g44120
At2g01250
At3g13580
At1g80750
GO:0016020 membrane C
IDA
AthAt3g13580
At2g44120
At2g01250
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt2g01250
At3g13580
At2g44120
At1g80750
SceS000003044
ISS
SpoSPAC3H5.07
SPAC664.06
SPBC18H10.12c
TAS
HsaRPL7
SceS000006119
GO:0022626 cytosolic ribosome C
IDA
AthAt2g01250
At2g44120
At3g13580
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPL7
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000004947
GO:0003677 DNA binding F
IDA
HsaRPL7
GO:0003723 RNA binding F
TAS
HsaRPL7
GO:0003729 mRNA binding F
IDA
HsaRPL7
GO:0003735 structural constituent of ribosome F
IDA
SceS000003044
ISS
AthAt2g01250
At3g13580
At1g80750
At2g44120
SpoSPBC18H10.12c
SPAC3H5.07
SPAC664.06
TAS
SceS000006119
GO:0019843 rRNA binding F
ISS
SceS000004947
GO:0042803 protein homodimerization activity F
IPI
HsaRPL7
GO:0000003 reproduction P
IMP
CelWBGene00004418
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000004947
GO:0000465 exonucleolytic trimming to generate mature 5'-end
of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)
P
IMP
SceS000004947
GO:0002119 nematode larval development P
IMP
CelWBGene00004418
GO:0006364 rRNA processing P
IMP
HsaRPL7
GO:0006412 translation P
IDA
SceS000003044
ISS
AthAt1g80750
At2g01250
At3g13580
At2g44120
SpoSPAC3H5.07
SPAC664.06
SPBC18H10.12c
TAS
HsaRPL7
SceS000006119
GO:0006414 translational elongation P
EXP
HsaRPL7
GO:0006417 regulation of translation P
RCA
SceS000003044
S000006119
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004418
GO:0040007 growth P
IMP
CelWBGene00004418
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004418
GO:0042255 ribosome assembly P
RCA
SceS000004947
GO:0042273 ribosomal large subunit biogenesis P
IMP
HsaRPL7
SceS000004947

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
87772

Species Gene ID NCBI link UniProt link
Pan troglodytes (Ptr) LOC744947 GI:114615478
Canis familiaris (Cfa) RPL7 GI:73988246
Mus musculus (Mmu) Gm5045 GI:82957238
Gallus gallus (Gga) RPL7 GI:57530626
Drosophila melanogaster (Dme) RpL7
(FBgn0005593)
GI:24583248
Anopheles gambiae (Aga) AgaP_AGAP008916 GI:158299570
Schizosaccharomyces pombe (Spo) rpl701
(SPBC18H10.12c)
GI:19112528 O60143
Schizosaccharomyces pombe (Spo) rpl7 GI:19115097
Saccharomyces cerevisiae (Sce) RPL7A
(S000003044)
GI:6321362 P05737
Saccharomyces cerevisiae (Sce) RPL7B
(S000006119)
GI:6325058 Q12213
Kluyveromyces lactis (Kla) KLLA0D03410g GI:50306489
Eremothecium gossypii (Ego) AGOS_AFL082W GI:45198437
Magnaporthe grisea (Mgr) MGG_05237 GI:145602037
Neurospora crassa (Ncr) NCU07829.1 GI:32416114
Arabidopsis thaliana (Ath) AT2G44120 GI:30689623
Arabidopsis thaliana (Ath) AT2G01250 GI:15226212
Arabidopsis thaliana (Ath) AT3G13580 GI:15231288
Oryza sativa (Osa) Os08g0234000 GI:115475427
Oryza sativa (Osa) Os04g0605900 GI:115460394
Plasmodium falciparum (Pfa) MAL3P2.29 GI:124504809


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g01250
GO:0005634 nucleus C
IDA
SpoSPBC18H10.12c
GO:0005730 nucleolus C
IDA
AthAt2g44120
SceS000006119
SpoSPBC18H10.12c
GO:0005737 cytoplasm C
IDA
SceS000006119
S000003044
GO:0005773 vacuole C
IDA
AthAt2g01250
At2g44120
GO:0005829 cytosol C
EXP
HsaRPL7
GO:0005840 ribosome C
NAS
DmeFBgn0005593
GO:0005886 plasma membrane C
IDA
AthAt2g01250
GO:0009507 chloroplast C
IDA
AthAt2g44120
At2g01250
At3g13580
GO:0015934 large ribosomal subunit C
ISS
AthAt2g44120
At2g01250
At3g13580
GO:0016020 membrane C
IDA
AthAt3g13580
At2g44120
At2g01250
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt2g01250
At3g13580
At2g44120
SceS000003044
ISS
DmeFBgn0005593
SpoSPBC18H10.12c
TAS
HsaRPL7
SceS000006119
GO:0022626 cytosolic ribosome C
IDA
AthAt2g01250
At2g44120
At3g13580
GO:0030529 ribonucleoprotein complex C
IDA
HsaRPL7
GO:0003677 DNA binding F
IDA
HsaRPL7
GO:0003723 RNA binding F
TAS
HsaRPL7
GO:0003729 mRNA binding F
IDA
HsaRPL7
NAS
DmeFBgn0005593
GO:0003735 structural constituent of ribosome F
IDA
SceS000003044
ISS
AthAt2g01250
At3g13580
At2g44120
DmeFBgn0005593
SpoSPBC18H10.12c
NAS
DmeFBgn0005593
TAS
SceS000006119
GO:0019843 rRNA binding F
NAS
DmeFBgn0005593
GO:0042803 protein homodimerization activity F
IPI
HsaRPL7
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0005593
GO:0006364 rRNA processing P
IMP
HsaRPL7
GO:0006412 translation P
IDA
SceS000003044
ISS
AthAt2g01250
At3g13580
At2g44120
DmeFBgn0005593
SpoSPBC18H10.12c
NAS
DmeFBgn0005593
TAS
HsaRPL7
SceS000006119
GO:0006414 translational elongation P
EXP
HsaRPL7
GO:0006417 regulation of translation P
RCA
SceS000003044
S000006119
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0005593
GO:0042273 ribosomal large subunit biogenesis P
IMP
HsaRPL7

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