YOGY Home YOGY Help

Search term: YPL211W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NIP7
SGD link S000006132
Alternative ID YPL211W
Description Nucleolar protein required for 60S ribosome subunit biogenesis, constituent of 66S pre-ribosomal particles; physically interacts with Nop8p and the exosome subunit Rrp43p
Synonyms YPL211W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3492 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Ribosome biogenesis protein NIP7

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g15770 GI:15234708
Caenorhabditis elegans (Cel) CE08687
(WBGene00016607)		 GI:17506003 P91154
Drosophila melanogaster (Dme) 7301217 GI:7301217
Homo sapiens (Hsa) Hs7705437
(NIP7)		 GI:7705437 Q9Y221
Homo sapiens (Hsa) Hs17434413 GI:17434413
Saccharomyces cerevisiae (Sce) YPL211w
(S000006132)		 GI:6325045 Q08962
Schizosaccharomyces pombe (Spo) SPCC320.11c GI:19075218 Q1MTQ9
Encephalitozoon cuniculi (Ecu) ECU10g0670 GI:19074676 Q8SUF5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC320.11c
GO:0005730 nucleolus C
IDA
SpoSPCC320.11c
TAS
SceS000006132
GO:0005829 cytosol C
IDA
SpoSPCC320.11c
GO:0022625 cytosolic large ribosomal subunit C
TAS
SceS000006132
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000006132
GO:0003674 molecular_function F
ND
SceS000006132
GO:0005515 protein binding F
IPI
HsaNIP7
GO:0000003 reproduction P
IMP
CelWBGene00016607
GO:0000027 ribosomal large subunit assembly P
TAS
SceS000006132
GO:0002119 nematode larval development P
IMP
CelWBGene00016607
GO:0006364 rRNA processing P
TAS
SceS000006132
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00016607
GO:0040007 growth P
IMP
CelWBGene00016607
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016607
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00016607
GO:0042254 ribosome biogenesis P
ISS
AthAt4g15770
SpoSPCC320.11c
GO:0042273 ribosomal large subunit biogenesis P
IPI
SceS000006132

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
56743

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) NIP7 GI:7705437 Q9Y221
Pan troglodytes (Ptr) NIP7 GI:114663309
Canis familiaris (Cfa) NIP7 GI:57087185
Mus musculus (Mmu) Nip7
(MGI:1913414)		 GI:13928674 Q9CXK8
Rattus norvegicus (Rno) Nip7
(RGD:620069)		 GI:20301988
Gallus gallus (Gga) NIP7 GI:50754027
Drosophila melanogaster (Dme) CG7006
(FBgn0039233)		 GI:24649803
Anopheles gambiae (Aga) AgaP_AGAP002330 GI:158291147
Caenorhabditis elegans (Cel) C43E11.9
(CE08687;
WBGene00016607)		 GI:17506003 P91154
Schizosaccharomyces pombe (Spo) SPCC320.11c GI:19075218 Q1MTQ9
Saccharomyces cerevisiae (Sce) NIP7
(S000006132)		 GI:6325045 Q08962
Kluyveromyces lactis (Kla) KLLA0B02266g GI:50303381
Eremothecium gossypii (Ego) AGOS_AFL104W GI:45198417
Magnaporthe grisea (Mgr) MGG_00482 GI:39974743
Neurospora crassa (Ncr) NCU00105.1 GI:32403156
Arabidopsis thaliana (Ath) AT4G15770 GI:30683394
Oryza sativa (Osa) Os07g0670600 GI:115473991
Plasmodium falciparum (Pfa) PF14_0635 GI:124810246


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1913414
PfaPF14_0635
GO:0005634 nucleus C
IDA
SpoSPCC320.11c
GO:0005730 nucleolus C
IDA
SpoSPCC320.11c
TAS
SceS000006132
GO:0005829 cytosol C
IDA
SpoSPCC320.11c
GO:0022625 cytosolic large ribosomal subunit C
TAS
SceS000006132
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000006132
GO:0003674 molecular_function F
ND
MmuMGI:1913414
SceS000006132
GO:0005515 protein binding F
IPI
HsaNIP7
GO:0000003 reproduction P
IMP
CelWBGene00016607
GO:0000027 ribosomal large subunit assembly P
TAS
SceS000006132
GO:0002119 nematode larval development P
IMP
CelWBGene00016607
GO:0006364 rRNA processing P
TAS
SceS000006132
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00016607
GO:0008150 biological_process P
ND
MmuMGI:1913414
PfaPF14_0635
GO:0040007 growth P
IMP
CelWBGene00016607
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016607
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00016607
GO:0042254 ribosome biogenesis P
ISS
AthAt4g15770
SpoSPCC320.11c
GO:0042273 ribosomal large subunit biogenesis P
IPI
SceS000006132

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2026

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4486 ENSANGP00000001317
Ashbya gossypii (Ago) ago3091 AFL104W
Arabidopsis thaliana (Ath) ath19400 At4g15770.1
Caenorhabditis elegans (Cel) cel3937 C43E11.9
(CE08687;
WBGene00016607)
Candida glabrata (Cgl) cgl4907 CAGL0M05775g
Cryptococcus neoformans (Cne) cne5069 186.m04001
Dictyostelium discoideum (Ddi) ddi3696 DDB0216882
Debaryomyces hansenii (Dha) dha1648 DEHA0C04950g
Drosophila melanogaster (Dme) dme14301 CG7006-PA
(FBgn0039233)
Encephalitozoon cuniculi (Ecu) ecu592 19074676
Takifugu rubripes (Fru) fru30529 SINFRUP00000143271
Gallus gallus (Gga) gga4868 ENSGALP00000000921
(NIP7)
Homo sapiens (Hsa) hsa12414 ENSP00000254940
(NIP7)		 Q9Y221-1
Kluyveromyces lactis (Kla) kla630 KLLA0B02266g
Mus musculus (Mmu) mmu26646 ENSMUSP00000034392
(MGI:1913414)		 Q9CXK8
Neurospora crassa (Ncr) ncr103 NCU00105.2
Oryza sativa (Osa) osa4558 2109.m00127
Oryza sativa (Osa) osa4575 2111.m00085
Oryza sativa (Osa) osa51473 5978.m00158
Plasmodium falciparum (Pfa) pfa1426 PF14_0635
Rattus norvegicus (Rno) rno14957 ENSRNOP00000027653
(RGD:620069)		 Q9WV50
Saccharomyces cerevisiae (Sce) sce6373 YPL211W
(S000006132)
Schizosaccharomyces pombe (Spo) spo3217 SPCC320.11c Q1MTQ9
Yarrowia lipolytica (Yli) yli5296 YALI0E34287g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1913414
PfaPF14_0635
GO:0005634 nucleus C
IDA
SpoSPCC320.11c
GO:0005730 nucleolus C
IDA
SpoSPCC320.11c
TAS
SceS000006132
GO:0005829 cytosol C
IDA
SpoSPCC320.11c
GO:0022625 cytosolic large ribosomal subunit C
TAS
SceS000006132
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000006132
GO:0003674 molecular_function F
ND
MmuMGI:1913414
SceS000006132
GO:0000003 reproduction P
IMP
CelWBGene00016607
GO:0000027 ribosomal large subunit assembly P
TAS
SceS000006132
GO:0002119 nematode larval development P
IMP
CelWBGene00016607
GO:0006364 rRNA processing P
TAS
SceS000006132
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00016607
GO:0008150 biological_process P
ND
MmuMGI:1913414
PfaPF14_0635
GO:0040007 growth P
IMP
CelWBGene00016607
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00016607
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00016607
GO:0042254 ribosome biogenesis P
ISS
AthAt4g15770
SpoSPCC320.11c
GO:0042273 ribosomal large subunit biogenesis P
IPI
SceS000006132

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC320.11c
(Q1MTQ9)		 YPL211W
(S000006132)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC320.11c
GO:0005730 nucleolus C
IDA
SpoSPCC320.11c
TAS
SceS000006132
GO:0005829 cytosol C
IDA
SpoSPCC320.11c
GO:0022625 cytosolic large ribosomal subunit C
TAS
SceS000006132
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000006132
GO:0003674 molecular_function F
ND
SceS000006132
GO:0000027 ribosomal large subunit assembly P
TAS
SceS000006132
GO:0006364 rRNA processing P
TAS
SceS000006132
GO:0042254 ribosome biogenesis P
ISS
SpoSPCC320.11c
GO:0042273 ribosomal large subunit biogenesis P
IPI
SceS000006132

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk