YOGY Home YOGY Help

Search term: YPL217C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BMS1
SGD link S000006138
Alternative ID YPL217C
Description GTPase required for synthesis of 40S ribosomal subunits and for processing the 35S pre-rRNA at sites A0, A1, and A2; interacts with Rcl1p, which stimulates its GTPase and U3 snoRNA binding activities; has similarity to Tsr1p
Synonyms YPL217C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1951 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING GTP-binding protein AARP2 involved in 40S ribosome biogenesis

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g06720 GI:15222176
Caenorhabditis elegans (Cel) CE27411 GI:17566148
Caenorhabditis elegans (Cel) CE29129 GI:17566150
Drosophila melanogaster (Dme) 7294027 GI:7294027
Homo sapiens (Hsa) Hs18426890 GI:18426890
Homo sapiens (Hsa) Hs18551500_2 GI:18551500
Homo sapiens (Hsa) Hs20470513 GI:20470513
Homo sapiens (Hsa) Hs20538749 GI:20538749
Homo sapiens (Hsa) Hs20560516 GI:20560516
Homo sapiens (Hsa) Hs22046268 GI:22046268
Homo sapiens (Hsa) Hs7661980 GI:7661980
Saccharomyces cerevisiae (Sce) YPL217c
(S000006138)
GI:6325039 Q08965
Schizosaccharomyces pombe (Spo) SPBC31E1.06 GI:19111894 O94653
Encephalitozoon cuniculi (Ecu) ECU06g0420 GI:19074292 Q8SVD7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005730 nucleolus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005737 cytoplasm C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005739 mitochondrion C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005819 spindle C
IDA
SpoSPBC31E1.06
GO:0030686 90S preribosome C
IDA
SceS000006138
GO:0003924 GTPase activity F
IDA
SceS000006138
IMP
SceS000006138
GO:0005525 GTP binding F
IDA
SceS000006138
IMP
SceS000006138
ISS
SpoSPBC31E1.06
GO:0034511 U3 snoRNA binding F
IDA
SceS000006138
GO:0006364 rRNA processing P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0042255 ribosome assembly P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000006138

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
7065

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) BMS1 GI:224589071
Pan troglodytes (Ptr) BMS1 GI:114630268
Canis familiaris (Cfa) BMS1 GI:73997951
Mus musculus (Mmu) Bms1
(MGI:2446132)
GI:39930555 Q3UYW7
Rattus norvegicus (Rno) Bms1 GI:109472546
Gallus gallus (Gga) BMS1 GI:118092451
Drosophila melanogaster (Dme) CG7728
(FBgn0036686)
GI:21355337
Anopheles gambiae (Aga) AgaP_AGAP005871 GI:158294912
Schizosaccharomyces pombe (Spo) bms1
(SPBC31E1.06)
GI:63054700 O94653
Saccharomyces cerevisiae (Sce) BMS1
(S000006138)
GI:6325039 Q08965
Kluyveromyces lactis (Kla) KLLA0B02068g GI:50303363
Eremothecium gossypii (Ego) AGOS_AFL113C GI:45198408
Magnaporthe grisea (Mgr) MGG_06202 GI:145603202
Neurospora crassa (Ncr) NCU04348.1 GI:32406176
Arabidopsis thaliana (Ath) AT1G06720 GI:15222176
Oryza sativa (Osa) Os03g0333100 GI:115452841


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2446132
GO:0005634 nucleus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005730 nucleolus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
HsaBMS1
SpoSPBC31E1.06
GO:0005737 cytoplasm C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005739 mitochondrion C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005819 spindle C
IDA
SpoSPBC31E1.06
GO:0030686 90S preribosome C
IDA
SceS000006138
GO:0003674 molecular_function F
ND
MmuMGI:2446132
GO:0003924 GTPase activity F
IDA
SceS000006138
IMP
SceS000006138
GO:0005525 GTP binding F
IDA
SceS000006138
IMP
SceS000006138
ISS
SpoSPBC31E1.06
GO:0034511 U3 snoRNA binding F
IDA
SceS000006138
GO:0006364 rRNA processing P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0008150 biological_process P
ND
MmuMGI:2446132
GO:0042255 ribosome assembly P
IDA
SceS000006138
ISS
HsaBMS1
SpoSPBC31E1.06
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000006138

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1175

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga1314 ENSANGP00000004512
Ashbya gossypii (Ago) ago3082 AFL113C
Arabidopsis thaliana (Ath) ath646 At1g06720.1
Caenorhabditis elegans (Cel) cel20202 Y61A9LA.10
(CE42325;
WBGene00022021)
Candida glabrata (Cgl) cgl1197 CAGL0E05874g
Cryptococcus neoformans (Cne) cne5353 179.m00205
Dictyostelium discoideum (Ddi) ddi9473 DDB0219277
Debaryomyces hansenii (Dha) dha5797 DEHA0G02244g
Drosophila melanogaster (Dme) dme9933 CG7728-PA
(FBgn0036686)
Danio rerio (Dre) dre3548 ENSDARP00000003761
Danio rerio (Dre) dre3549 ENSDARP00000006669
Encephalitozoon cuniculi (Ecu) ecu1519 19074292
Takifugu rubripes (Fru) fru17992 SINFRUP00000153174
Takifugu rubripes (Fru) fru17990 SINFRUP00000168352
Takifugu rubripes (Fru) fru17988 SINFRUP00000168691
Takifugu rubripes (Fru) fru17989 SINFRUP00000170055
Takifugu rubripes (Fru) fru17987 SINFRUP00000174167
Takifugu rubripes (Fru) fru17991 SINFRUP00000175267
Gallus gallus (Gga) gga20195 ENSGALP00000004123
Gallus gallus (Gga) gga20192 ENSGALP00000004124
(BMS1)
Gallus gallus (Gga) gga20193 ENSGALP00000004125
Gallus gallus (Gga) gga20191 ENSGALP00000004126
Gallus gallus (Gga) gga20196 ENSGALP00000004127
Gallus gallus (Gga) gga20194 ENSGALP00000004128
Homo sapiens (Hsa) hsa3764 ENSP00000298600
Kluyveromyces lactis (Kla) kla621 KLLA0B02068g
Mus musculus (Mmu) mmu22573 ENSMUSP00000032237
(MGI:2446132)
Q6PGF5
Neurospora crassa (Ncr) ncr4224 NCU04348.2
Oryza sativa (Osa) osa61030 6582.m00140
Plasmodium falciparum (Pfa) pfa2576 PFA0330w
Rattus norvegicus (Rno) rno22075 ENSRNOP00000008741
(RGD:1308043)
B2GV18
Saccharomyces cerevisiae (Sce) sce6379 YPL217C
(S000006138)
Schizosaccharomyces pombe (Spo) spo2061 SPBC31E1.06 O94653
Yarrowia lipolytica (Yli) yli2589 YALI0C21846g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2446132
GO:0005634 nucleus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005730 nucleolus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005737 cytoplasm C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005739 mitochondrion C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005819 spindle C
IDA
SpoSPBC31E1.06
GO:0005886 plasma membrane C
TAS
PfaPFA0330w
GO:0030686 90S preribosome C
IDA
SceS000006138
GO:0003674 molecular_function F
ND
MmuMGI:2446132
GO:0003924 GTPase activity F
IDA
SceS000006138
IMP
SceS000006138
GO:0005525 GTP binding F
IDA
SceS000006138
IMP
SceS000006138
ISS
SpoSPBC31E1.06
GO:0034511 U3 snoRNA binding F
IDA
SceS000006138
GO:0002119 nematode larval development P
IMP
CelWBGene00022021
GO:0006364 rRNA processing P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0008150 biological_process P
ND
MmuMGI:2446132
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00022021
GO:0016246 RNA interference P
IMP
CelWBGene00022021
GO:0040007 growth P
IMP
CelWBGene00022021
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00022021
GO:0042255 ribosome assembly P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000006138

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC31E1.06
(O94653)
YPL217C
(S000006138)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005730 nucleolus C
IDA
SceS000006138
SpoSPBC31E1.06
ISS
SpoSPBC31E1.06
GO:0005737 cytoplasm C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005739 mitochondrion C
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0005819 spindle C
IDA
SpoSPBC31E1.06
GO:0030686 90S preribosome C
IDA
SceS000006138
GO:0003924 GTPase activity F
IDA
SceS000006138
IMP
SceS000006138
GO:0005525 GTP binding F
IDA
SceS000006138
IMP
SceS000006138
ISS
SpoSPBC31E1.06
GO:0034511 U3 snoRNA binding F
IDA
SceS000006138
GO:0006364 rRNA processing P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0042255 ribosome assembly P
IDA
SceS000006138
ISS
SpoSPBC31E1.06
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000006138

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk