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Search term: YPR034W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARP7
SGD link S000006238
Alternative ID YPR034W
Description Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation
Synonyms YPR034W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0679 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Actin-related protein - Arp4p/Act3p

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g18450 GI:15221771
Caenorhabditis elegans (Cel) CE26349 GI:17544610
Drosophila melanogaster (Dme) 7302793
(FBgn0025716)		 GI:19922434
Homo sapiens (Hsa) Hs4757718
(ACTL6A)		 GI:4757718 O96019
Homo sapiens (Hsa) Hs7705294
(ACTL6B)		 GI:7705294 O94805
Saccharomyces cerevisiae (Sce) YJL081c
(S000003617)		 GI:6322380 P80428
Saccharomyces cerevisiae (Sce) YPR034w
(S000006238)		 GI:6325291 Q12406
Schizosaccharomyces pombe (Spo) SPAC23D3.09 GI:19115458 Q09849
Schizosaccharomyces pombe (Spo) SPBP23A10.08 GI:19112612 Q9P7X7
Arabidopsis thaliana (Ath) At1g18450 GI:15221771
Caenorhabditis elegans (Cel) CE26349 GI:17544610
Drosophila melanogaster (Dme) 7302793
(FBgn0025716)		 GI:19922434
Homo sapiens (Hsa) Hs4757718
(ACTL6A)		 GI:4757718 O96019
Homo sapiens (Hsa) Hs7705294
(ACTL6B)		 GI:7705294 O94805
Saccharomyces cerevisiae (Sce) YJL081c
(S000003617)		 GI:6322380 P80428
Saccharomyces cerevisiae (Sce) YPR034w
(S000006238)		 GI:6325291 Q12406
Schizosaccharomyces pombe (Spo) SPAC23D3.09 GI:19115458 Q09849
Schizosaccharomyces pombe (Spo) SPBP23A10.08 GI:19112612 Q9P7X7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IC
SpoSPAC23D3.09
IDA
SceS000003617
GO:0000812 Swr1 complex C
IDA
SceS000003617
SpoSPBP23A10.08
GO:0005634 nucleus C
IDA
AthAt1g18450
HsaACTL6B
SceS000003617
S000006238
SpoSPBP23A10.08
SPAC23D3.09
GO:0005730 nucleolus C
IDA
AthAt1g18450
GO:0005829 cytosol C
IDA
SpoSPAC23D3.09
GO:0005884 actin filament C
ISS
DmeFBgn0025716
GO:0005886 plasma membrane C
IDA
HsaACTL6A
GO:0016514 SWI/SNF complex C
IDA
HsaACTL6A
SceS000006238
SpoSPAC23D3.09
IPI
SceS000006238
ISS
HsaACTL6B
GO:0016586 RSC complex C
IDA
SceS000006238
SpoSPAC23D3.09
GO:0031011 Ino80 complex C
IDA
SpoSPBP23A10.08
IPI
SceS000003617
GO:0035060 brahma complex C
IDA
DmeFBgn0025716
GO:0035267 NuA4 histone acetyltransferase
complex		 C
IDA
HsaACTL6A
SpoSPBP23A10.08
IPI
SceS000003617
GO:0043189 H4/H2A histone acetyltransferase
complex		 C
IDA
SpoSPBP23A10.08
GO:0044454 nuclear chromosome part C
RCA
SceS000006238
GO:0071564 npBAF complex C
ISS
HsaACTL6A
GO:0071565 nBAF complex C
ISS
HsaACTL6B
GO:0003674 molecular_function F
ND
SpoSPAC23D3.09
SPBP23A10.08
GO:0003682 chromatin binding F
IDA
SceS000003617
GO:0003713 transcription coactivator activity F
IC
DmeFBgn0025716
GO:0004402 histone acetyltransferase activity F
IMP
SceS000003617
GO:0005200 structural constituent of cytoskeleton F
ISS
AthAt1g18450
DmeFBgn0025716
TAS
HsaACTL6B
GO:0005515 protein binding F
IPI
HsaACTL6B
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000006238
GO:0016251 general RNA polymerase II transcription factor
activity		 F
TAS
SceS000006238
GO:0043140 ATP-dependent 3'-5' DNA helicase
activity		 F
IDA
SceS000003617
GO:0000070 mitotic sister chromatid segregation P
IMP
SpoSPBP23A10.08
GO:0000278 mitotic cell cycle P
IMP
SpoSPBP23A10.08
GO:0000910 cytokinesis P
IMP
DmeFBgn0025716
GO:0006281 DNA repair P
IDA
SceS000003617
IMP
SceS000003617
GO:0006325 chromatin organization P
IGI
SceS000006238
IMP
SceS000003617
IPI
SceS000003617
NAS
HsaACTL6B
TAS
AthAt1g18450
GO:0006337 nucleosome disassembly P
IDA
SceS000006238
GO:0006338 chromatin remodeling P
IDA
SceS000003617
IPI
SpoSPBP23A10.08
ISS
SpoSPAC23D3.09
GO:0006355 regulation of transcription, DNA-dependent P
IMP
SceS000003617
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IDA
SceS000003617
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000006238
GO:0007010 cytoskeleton organization P
ISS
DmeFBgn0025716
GO:0007165 signal transduction P
TAS
HsaACTL6A
GO:0007517 muscle organ development P
IMP
DmeFBgn0025716
GO:0008608 attachment of spindle microtubules to
kinetochore		 P
IMP
SpoSPBP23A10.08
GO:0010551 regulation of gene-specific transcription from RNA
polymerase II promoter		 P
IC
SpoSPAC23D3.09
GO:0010552 positive regulation of gene-specific transcription
from RNA polymerase II promoter		 P
IEP
SpoSPAC23D3.09
GO:0010553 negative regulation of gene-specific transcription
from RNA polymerase II promoter		 P
IEP
SpoSPAC23D3.09
GO:0010570 regulation of filamentous growth P
IMP
SpoSPAC23D3.09
GO:0016573 histone acetylation P
IDA
SceS000003617
IGI
SpoSPBP23A10.08
GO:0030702 chromatin silencing at centromere P
IMP
SpoSPBP23A10.08
GO:0031134 sister chromatid biorientation P
IMP
SpoSPBP23A10.08
GO:0043044 ATP-dependent chromatin remodeling P
IDA
SceS000006238
GO:0043486 histone exchange P
IPI
SpoSPBP23A10.08
GO:0043967 histone H4 acetylation P
IDA
HsaACTL6A
GO:0043968 histone H2A acetylation P
IDA
HsaACTL6A
GO:0045893 positive regulation of transcription,
DNA-dependent		 P
IDA
DmeFBgn0025716
GO:0045941 positive regulation of transcription P
RCA
SceS000006238
GO:0048235 pollen sperm cell differentiation P
IMP
AthAt1g18450
GO:0048574 long-day photoperiodism, flowering P
IMP
AthAt1g18450
GO:0048813 dendrite morphogenesis P
IMP
DmeFBgn0025716
GO:0051382 kinetochore assembly P
IMP
SceS000003617

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40504

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) ARP7
(S000006238)		 GI:6325291 Q12406
Eremothecium gossypii (Ego) AGOS_ACR184C GI:45185870


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006238
GO:0016514 SWI/SNF complex C
IDA
SceS000006238
IPI
SceS000006238
GO:0016586 RSC complex C
IDA
SceS000006238
GO:0044454 nuclear chromosome part C
RCA
SceS000006238
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000006238
GO:0016251 general RNA polymerase II transcription factor
activity		 F
TAS
SceS000006238
GO:0006325 chromatin organization P
IGI
SceS000006238
GO:0006337 nucleosome disassembly P
IDA
SceS000006238
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000006238
GO:0043044 ATP-dependent chromatin remodeling P
IDA
SceS000006238
GO:0045941 positive regulation of transcription P
RCA
SceS000006238

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24796

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1231 ACR184C
Candida glabrata (Cgl) cgl3752 CAGL0K05335g
Debaryomyces hansenii (Dha) dha6283 DEHA0G13090g
Kluyveromyces lactis (Kla) kla3231 KLLA0E06281g
Saccharomyces cerevisiae (Sce) sce6488 YPR034W
(S000006238)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000006238
GO:0016514 SWI/SNF complex C
IDA
SceS000006238
IPI
SceS000006238
GO:0016586 RSC complex C
IDA
SceS000006238
GO:0044454 nuclear chromosome part C
RCA
SceS000006238
GO:0008094 DNA-dependent ATPase activity F
IDA
SceS000006238
GO:0016251 general RNA polymerase II transcription factor
activity		 F
TAS
SceS000006238
GO:0006325 chromatin organization P
IGI
SceS000006238
GO:0006337 nucleosome disassembly P
IDA
SceS000006238
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000006238
GO:0043044 ATP-dependent chromatin remodeling P
IDA
SceS000006238
GO:0045941 positive regulation of transcription P
RCA
SceS000006238

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