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Search term: YPR042C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PUF2
SGD link S000006246
Alternative ID YPR042C
Description Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins
Synonyms YPR042C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4574 ----YPE

KOGs classification KOGs description
POORLY CHARACTERIZED RNA-binding protein (contains RRM and Pumilio-like repeats)

Species KOG link NCBI link UniProt link
Saccharomyces cerevisiae (Sce) YJR091c
(S000003851)		 GI:6322550 P47135
Saccharomyces cerevisiae (Sce) YPR042c
(S000006246)		 GI:6325299 Q12221
Schizosaccharomyces pombe (Spo) SPBC56F2.08c GI:19113501 O60059
Schizosaccharomyces pombe (Spo) SPBP35G2.14 GI:19112181 Q9P789
Encephalitozoon cuniculi (Ecu) ECU07g0480 GI:19074470 Q8SV28


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006246
SpoSPBC56F2.08c
SPBP35G2.14
GO:0005829 cytosol C
IDA
SpoSPBP35G2.14
GO:0032473 external side of mitochondrial outer
membrane		 C
IDA
SceS000003851
GO:0003729 mRNA binding F
IDA
SceS000006246
S000003851
ISS
SceS000006246
S000003851
SpoSPBC56F2.08c
GO:0000288 nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay		 P
IGI
SceS000006246
S000003851
ISS
SpoSPBC56F2.08c
GO:0008150 biological_process P
ND
SpoSPBP35G2.14
GO:0034629 cellular protein complex localization P
IMP
SceS000003851
GO:0051654 establishment of mitochondrion
localization		 P
IMP
SceS000003851

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117934

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBP35G2.14 GI:19112181 Q9P789
Saccharomyces cerevisiae (Sce) PUF2
(S000006246)		 GI:6325299 Q12221


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006246
SpoSPBP35G2.14
GO:0005829 cytosol C
IDA
SpoSPBP35G2.14
GO:0003729 mRNA binding F
IDA
SceS000006246
ISS
SceS000006246
GO:0000288 nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay		 P
IGI
SceS000006246
GO:0008150 biological_process P
ND
SpoSPBP35G2.14

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBP35G2.14
(Q9P789)		 YPR042C
(S000006246)
SPBC56F2.08c
(O60059)		 YPR042C
(S000006246)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006246
SpoSPBC56F2.08c
SPBP35G2.14
GO:0005829 cytosol C
IDA
SpoSPBP35G2.14
GO:0003729 mRNA binding F
IDA
SceS000006246
ISS
SceS000006246
SpoSPBC56F2.08c
GO:0000288 nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay		 P
IGI
SceS000006246
ISS
SpoSPBC56F2.08c
GO:0008150 biological_process P
ND
SpoSPBP35G2.14

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