YOGY Home YOGY Help

Search term: YPR047W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MSF1
SGD link S000006251
Alternative ID YPR047W
Description Mitochondrial phenylalanyl-tRNA synthetase, active as a monomer, unlike the cytoplasmic subunit which is active as a dimer complexed to a beta subunit dimer; similar to the alpha subunit of E. coli phenylalanyl-tRNA synthetase
Synonyms YPR047W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2783 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Phenylalanyl-tRNA synthetase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g58140 GI:11271752
Caenorhabditis elegans (Cel) CE26686 GI:17566120
Drosophila melanogaster (Dme) 7303248
(FBgn0020766)		 GI:17137424
Homo sapiens (Hsa) Hs5729820
(FARS2)		 GI:5729820 O95363
Homo sapiens (Hsa) Hs14770439_2 GI:14770439
Saccharomyces cerevisiae (Sce) YPR047w
(S000006251)		 GI:6325304
Schizosaccharomyces pombe (Spo) SPCC736.03c GI:19075274 O74952


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
IDA
HsaFARS2
GO:0005739 mitochondrion C
IDA
AthAt3g58140
SceS000006251
IMP
SceS000006251
ISS
DmeFBgn0020766
SpoSPCC736.03c
GO:0005759 mitochondrial matrix C
EXP
HsaFARS2
GO:0009507 chloroplast C
IDA
AthAt3g58140
GO:0016020 membrane C
IDA
AthAt3g58140
GO:0000049 tRNA binding F
IDA
HsaFARS2
GO:0004826 phenylalanine-tRNA ligase activity F
EXP
HsaFARS2
IDA
HsaFARS2
SceS000006251
IMP
SceS000006251
ISS
AthAt3g58140
DmeFBgn0020766
SceS000006251
SpoSPCC736.03c
NAS
DmeFBgn0020766
GO:0005524 ATP binding F
ISS
AthAt3g58140
SpoSPCC736.03c
GO:0006432 phenylalanyl-tRNA aminoacylation P
IC
SpoSPCC736.03c
IDA
HsaFARS2
SceS000006251
ISS
AthAt3g58140
DmeFBgn0020766
GO:0007040 lysosome organization P
IMP
DmeFBgn0020766
GO:0008033 tRNA processing P
IDA
HsaFARS2
GO:0032543 mitochondrial translation P
NAS
SpoSPCC736.03c
GO:0070156 mitochondrial phenylalanyl-tRNA
aminoacylation		 P
IMP
SceS000006251

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4788

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) FARS2 GI:5729820 O95363
Pan troglodytes (Ptr) FARS2 GI:114605322
Canis familiaris (Cfa) FARS2 GI:74004026
Mus musculus (Mmu) Fars2
(MGI:1917205)		 GI:22267456 Q8BW46
Rattus norvegicus (Rno) Fars2
(RGD:1309416)		 GI:61557070
Gallus gallus (Gga) FARS2 GI:118086437
Drosophila melanogaster (Dme) Aats-phe
(FBgn0020766)		 GI:17137424
Anopheles gambiae (Aga) AgaP_AGAP012096 GI:158300540
Caenorhabditis elegans (Cel) frs-3
(CE26224;
WBGene00013361)		 GI:32566635
Schizosaccharomyces pombe (Spo) SPCC736.03c GI:19075274 O74952
Saccharomyces cerevisiae (Sce) MSF1
(S000006251)		 GI:37362703
Kluyveromyces lactis (Kla) KLLA0B12177g GI:50304245
Eremothecium gossypii (Ego) AGOS_ADL305C GI:45187568
Magnaporthe grisea (Mgr) MGG_03217 GI:145608300
Neurospora crassa (Ncr) NCU01512.1 GI:32414943
Arabidopsis thaliana (Ath) AT3G58140 GI:18410886
Oryza sativa (Osa) Os12g0533700 GI:115488878
Plasmodium falciparum (Pfa) PFF0180w GI:86170496


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
IDA
HsaFARS2
GO:0005739 mitochondrion C
IDA
AthAt3g58140
MmuMGI:1917205
SceS000006251
IMP
SceS000006251
ISS
DmeFBgn0020766
SpoSPCC736.03c
GO:0005759 mitochondrial matrix C
EXP
HsaFARS2
GO:0009507 chloroplast C
IDA
AthAt3g58140
GO:0016020 membrane C
IDA
AthAt3g58140
GO:0000049 tRNA binding F
IDA
HsaFARS2
GO:0003674 molecular_function F
ND
MmuMGI:1917205
GO:0004826 phenylalanine-tRNA ligase activity F
EXP
HsaFARS2
IDA
HsaFARS2
SceS000006251
IMP
SceS000006251
ISS
AthAt3g58140
DmeFBgn0020766
SceS000006251
SpoSPCC736.03c
NAS
DmeFBgn0020766
GO:0005524 ATP binding F
ISS
AthAt3g58140
SpoSPCC736.03c
GO:0006432 phenylalanyl-tRNA aminoacylation P
IC
SpoSPCC736.03c
IDA
HsaFARS2
SceS000006251
ISS
AthAt3g58140
DmeFBgn0020766
GO:0007040 lysosome organization P
IMP
DmeFBgn0020766
GO:0008033 tRNA processing P
IDA
HsaFARS2
GO:0008150 biological_process P
ND
MmuMGI:1917205
GO:0032543 mitochondrial translation P
NAS
SpoSPCC736.03c
GO:0070156 mitochondrial phenylalanyl-tRNA
aminoacylation		 P
IMP
SceS000006251

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2632

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga9285 ENSANGP00000009207
Ashbya gossypii (Ago) ago1436 ADL305C
Arabidopsis thaliana (Ath) ath17219 At3g58140.1
Caenorhabditis elegans (Cel) cel20178 Y60A3A.13
Candida glabrata (Cgl) cgl2441 CAGL0H08602g
Cryptococcus neoformans (Cne) cne5705 179.m00570
Dictyostelium discoideum (Ddi) ddi11933 DDB0231330
Debaryomyces hansenii (Dha) dha3197 DEHA0D20119g
Drosophila melanogaster (Dme) dme4996 CG13348-PA
(FBgn0020766)
Takifugu rubripes (Fru) fru24102 SINFRUP00000153358
Gallus gallus (Gga) gga10508 ENSGALP00000020859
Gallus gallus (Gga) gga10509 ENSGALP00000020860
(FARS2)
Homo sapiens (Hsa) hsa26394 ENSP00000274680
(FARS2)		 O95363
Homo sapiens (Hsa) hsa26395 ENSP00000316335
(FARS2)		 O95363
Kluyveromyces lactis (Kla) kla1070 KLLA0B12177g
Mus musculus (Mmu) mmu6835 ENSMUSP00000021857
(MGI:1917205)		 Q99M01
Neurospora crassa (Ncr) ncr1467 NCU01512.2
Oryza sativa (Osa) osa33528 4637.m00110
Plasmodium falciparum (Pfa) pfa3001 PFF0180w
Rattus norvegicus (Rno) rno13212 ENSRNOP00000021660
(RGD:1309416)		 Q6AYQ3
Saccharomyces cerevisiae (Sce) sce6502 YPR047W
(S000006251)
Schizosaccharomyces pombe (Spo) spo1515 SPCC736.03c O74952
Yarrowia lipolytica (Yli) yli2461 YALI0C18535g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt3g58140
MmuMGI:1917205
SceS000006251
IMP
SceS000006251
ISS
DmeFBgn0020766
SpoSPCC736.03c
GO:0009507 chloroplast C
IDA
AthAt3g58140
GO:0016020 membrane C
IDA
AthAt3g58140
GO:0003674 molecular_function F
ND
MmuMGI:1917205
GO:0004826 phenylalanine-tRNA ligase activity F
IDA
SceS000006251
IMP
SceS000006251
ISS
AthAt3g58140
DmeFBgn0020766
SceS000006251
SpoSPCC736.03c
NAS
DmeFBgn0020766
GO:0005524 ATP binding F
ISS
AthAt3g58140
SpoSPCC736.03c
GO:0006432 phenylalanyl-tRNA aminoacylation P
IC
SpoSPCC736.03c
IDA
SceS000006251
ISS
AthAt3g58140
DmeFBgn0020766
GO:0007040 lysosome organization P
IMP
DmeFBgn0020766
GO:0008150 biological_process P
ND
MmuMGI:1917205
GO:0032543 mitochondrial translation P
NAS
SpoSPCC736.03c
GO:0070156 mitochondrial phenylalanyl-tRNA
aminoacylation		 P
IMP
SceS000006251

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC736.03c
(O74952)		 YPR047W
(S000006251)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000006251
IMP
SceS000006251
ISS
SpoSPCC736.03c
GO:0004826 phenylalanine-tRNA ligase activity F
IDA
SceS000006251
IMP
SceS000006251
ISS
SceS000006251
SpoSPCC736.03c
GO:0005524 ATP binding F
ISS
SpoSPCC736.03c
GO:0006432 phenylalanyl-tRNA aminoacylation P
IC
SpoSPCC736.03c
IDA
SceS000006251
GO:0032543 mitochondrial translation P
NAS
SpoSPCC736.03c
GO:0070156 mitochondrial phenylalanyl-tRNA
aminoacylation		 P
IMP
SceS000006251

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk