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KOG name | Phylogenetic pattern (and link to KOGs with this pattern) |
KOG2150 | ACDHYPE![]() |
KOGs classification | KOGs description |
INFORMATION STORAGE AND PROCESSING | CCR4-NOT transcriptional regulation complex, NOT5 subunit |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||||
GO:0005737 | cytoplasm | C |
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GO:0005829 | cytosol | C |
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GO:0030015 | CCR4-NOT core complex | C |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0005515 | protein binding | F |
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GO:0030528 | transcription regulator activity | F |
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GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | P |
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GO:0006351 | transcription, DNA-dependent | P |
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GO:0006352 | transcription initiation | P |
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GO:0006354 | RNA elongation | P |
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GO:0006357 | regulation of transcription from RNA polymerase II promoter | P |
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GO:0006366 | transcription from RNA polymerase II promoter | P |
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GO:0006368 | RNA elongation from RNA polymerase II promoter | P |
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GO:0006402 | mRNA catabolic process | P |
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GO:0016481 | negative regulation of transcription | P |
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GO:0016567 | protein ubiquitination | P |
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GO:0032774 | RNA biosynthetic process | P |
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HomoloGene cluster | Phylogenetic pattern |
74854 | ![]() |
Species | Gene ID | NCBI link | UniProt link |
Saccharomyces cerevisiae (Sce) | NOT5 (S000006276) | GI:6325329 | Q12514 |
Kluyveromyces lactis (Kla) | KLLA0B09196g | GI:50303977 |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||
GO:0005737 | cytoplasm | C |
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GO:0030015 | CCR4-NOT core complex | C |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | P |
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GO:0006352 | transcription initiation | P |
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GO:0006357 | regulation of transcription from RNA polymerase II promoter | P |
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GO:0006368 | RNA elongation from RNA polymerase II promoter | P |
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GO:0016567 | protein ubiquitination | P |
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OrthoMCL cluster | Phylogenetic pattern |
OG1_680 | ![]() |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005575 | cellular_component | C |
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GO:0005737 | cytoplasm | C |
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GO:0005829 | cytosol | C |
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GO:0030015 | CCR4-NOT core complex | C |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0005515 | protein binding | F |
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GO:0030528 | transcription regulator activity | F |
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GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | P |
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GO:0006350 | transcription | P |
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GO:0006351 | transcription, DNA-dependent | P |
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GO:0006352 | transcription initiation | P |
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GO:0006354 | RNA elongation | P |
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GO:0006357 | regulation of transcription from RNA polymerase II promoter | P |
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GO:0006366 | transcription from RNA polymerase II promoter | P |
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GO:0006368 | RNA elongation from RNA polymerase II promoter | P |
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GO:0006402 | mRNA catabolic process | P |
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GO:0008150 | biological_process | P |
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GO:0016481 | negative regulation of transcription | P |
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GO:0016567 | protein ubiquitination | P |
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GO:0032774 | RNA biosynthetic process | P |
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Curated yeast ortholog results:
S. pombe systematic ID | S. cerevisiae systematic ID |
SPAC1B3.05 (O13870) | YPR072W (S000006276) |
GO ID | GO term | GO aspect | Evidence codes and associations | ||||||||
GO:0005737 | cytoplasm | C |
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GO:0005829 | cytosol | C |
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GO:0030015 | CCR4-NOT core complex | C |
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GO:0004842 | ubiquitin-protein ligase activity | F |
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GO:0030528 | transcription regulator activity | F |
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GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | P |
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GO:0006352 | transcription initiation | P |
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GO:0006354 | RNA elongation | P |
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GO:0006357 | regulation of transcription from RNA polymerase II promoter | P |
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GO:0006368 | RNA elongation from RNA polymerase II promoter | P |
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GO:0006402 | mRNA catabolic process | P |
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GO:0016567 | protein ubiquitination | P |
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