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Search term: YPR086W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SUA7
SGD link S000006290
Alternative ID YPR086W
Description Transcription factor TFIIB, a general transcription factor required for transcription initiation and start site selection by RNA polymerase II
Synonyms YPR086W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1597 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor TFIIB

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g41630 GI:15227397
Arabidopsis thaliana (Ath) At3g10330 GI:15228267
Arabidopsis thaliana (Ath) At3g29380 GI:15228689
Arabidopsis thaliana (Ath) At3g57370 GI:15230282
Arabidopsis thaliana (Ath) At4g10680 GI:15236883
Arabidopsis thaliana (Ath) At4g36650 GI:15234473
Caenorhabditis elegans (Cel) CE27396
(WBGene00006648)
GI:17564892 O16991
Drosophila melanogaster (Dme) 7297699
(FBgn0004915)
GI:17136758
Homo sapiens (Hsa) Hs4504193
(GTF2B)
GI:4504193 Q00403
Saccharomyces cerevisiae (Sce) YPR086w
(S000006290)
GI:6325343 P29055
Schizosaccharomyces pombe (Spo) SPAC16E8.16 GI:19115141 O13749
Encephalitozoon cuniculi (Ecu) ECU06g1100i GI:19074360 Q8SRP3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC16E8.16
IDA
AthAt3g10330
SpoSPAC16E8.16
NAS
DmeFBgn0004915
GO:0005654 nucleoplasm C
EXP
HsaGTF2B
IPI
SceS000006290
GO:0005667 transcription factor complex C
ISS
DmeFBgn0004915
GO:0005737 cytoplasm C
IDA
AthAt3g10330
GO:0009527 plastid outer membrane C
IDA
AthAt4g36650
GO:0000182 rDNA binding F
IDA
AthAt4g36650
GO:0003702 RNA polymerase II transcription factor
activity
F
ISS
AthAt3g57370
At3g10330
At3g29380
At4g36650
At4g10680
At2g41630
GO:0005515 protein binding F
IPI
HsaGTF2B
GO:0008134 transcription factor binding F
IPI
DmeFBgn0004915
HsaGTF2B
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000006290
IPI
SceS000006290
ISS
DmeFBgn0004915
SceS000006290
TAS
HsaGTF2B
GO:0030528 transcription regulator activity F
IDA
SpoSPAC16E8.16
GO:0046966 thyroid hormone receptor binding F
IPI
HsaGTF2B
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
NAS
DmeFBgn0004915
GO:0006366 transcription from RNA polymerase II
promoter
P
TAS
HsaGTF2B
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
EXP
HsaGTF2B
IDA
SceS000006290
SpoSPAC16E8.16
IPI
SceS000006290
ISS
DmeFBgn0004915
SceS000006290
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
EXP
HsaGTF2B
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006648
GO:0045449 regulation of transcription P
IDA
SpoSPAC16E8.16
GO:0046686 response to cadmium ion P
IEP
AthAt3g29380
GO:0051101 regulation of DNA binding P
IDA
DmeFBgn0004915

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
1158

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) GTF2B GI:4504193 Q00403
Pan troglodytes (Ptr) GTF2B GI:114557689
Canis familiaris (Cfa) GTF2B GI:57088257
Mus musculus (Mmu) Gtf2b
(MGI:2385191)
GI:21704076 P62915
Rattus norvegicus (Rno) Gtf2b
(RGD:619735)
GI:13591965
Gallus gallus (Gga) GTF2B GI:118094407
Drosophila melanogaster (Dme) TfIIB
(FBgn0004915)
GI:17136758
Anopheles gambiae (Aga) AgaP_AGAP009558 GI:158288246
Caenorhabditis elegans (Cel) ttb-1
(CE27396;
WBGene00006648)
GI:17564892 O16991
Schizosaccharomyces pombe (Spo) SPAC16E8.16 GI:19115141 O13749
Saccharomyces cerevisiae (Sce) SUA7
(S000006290)
GI:6325343 P29055
Kluyveromyces lactis (Kla) TF2B_KLULA GI:50307385
Eremothecium gossypii (Ego) AGOS_ADR007C GI:45187880
Magnaporthe grisea (Mgr) MGG_05370 GI:39940916
Neurospora crassa (Ncr) NCU07289.1 GI:32414191
Arabidopsis thaliana (Ath) AT3G10330 GI:15228267
Arabidopsis thaliana (Ath) TFIIB GI:15227397
Oryza sativa (Osa) Os09g0534800 GI:115480363
Plasmodium falciparum (Pfa) MAL1P2.34 GI:124505847


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC16E8.16
IDA
AthAt3g10330
MmuMGI:2385191
SpoSPAC16E8.16
NAS
DmeFBgn0004915
GO:0005654 nucleoplasm C
EXP
HsaGTF2B
IPI
SceS000006290
GO:0005667 transcription factor complex C
ISS
DmeFBgn0004915
GO:0005737 cytoplasm C
IDA
AthAt3g10330
GO:0003677 DNA binding F
IDA
MmuMGI:2385191
GO:0003702 RNA polymerase II transcription factor
activity
F
ISS
AthAt3g10330
TFIIB
GO:0005515 protein binding F
IPI
HsaGTF2B
MmuMGI:2385191
GO:0008134 transcription factor binding F
IPI
DmeFBgn0004915
HsaGTF2B
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000006290
IPI
SceS000006290
ISS
DmeFBgn0004915
SceS000006290
TAS
HsaGTF2B
GO:0030528 transcription regulator activity F
IDA
SpoSPAC16E8.16
GO:0046966 thyroid hormone receptor binding F
IPI
HsaGTF2B
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
NAS
DmeFBgn0004915
GO:0006366 transcription from RNA polymerase II
promoter
P
TAS
HsaGTF2B
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
EXP
HsaGTF2B
IDA
SceS000006290
SpoSPAC16E8.16
IPI
SceS000006290
ISS
DmeFBgn0004915
SceS000006290
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
EXP
HsaGTF2B
GO:0008150 biological_process P
ND
MmuMGI:2385191
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006648
GO:0045449 regulation of transcription P
IDA
SpoSPAC16E8.16
GO:0051101 regulation of DNA binding P
IDA
DmeFBgn0004915

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_959

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga11718 ENSANGP00000020059
Ashbya gossypii (Ago) ago1748 ADR007C
Arabidopsis thaliana (Ath) ath11322 At2g41630.1
Arabidopsis thaliana (Ath) ath13125 At3g10330.1
Arabidopsis thaliana (Ath) ath15317 At3g29380.1
Caenorhabditis elegans (Cel) cel16951 W03F9.5
(CE27396;
WBGene00006648)
Candida glabrata (Cgl) cgl3864 CAGL0K07964g
Cryptococcus neoformans (Cne) cne1398 180.m00346
Cryptococcus neoformans (Cne) cne1399 180.m00347
Dictyostelium discoideum (Ddi) ddi13187 DDB0216283
Debaryomyces hansenii (Dha) dha3921 DEHA0E15323g
Drosophila melanogaster (Dme) dme1837 CG5193-PA
(FBgn0004915)
Danio rerio (Dre) dre11110 ENSDARP00000009188
(gtf2b)
Q7SX98
Encephalitozoon cuniculi (Ecu) ecu1587 19074360
Takifugu rubripes (Fru) fru1311 SINFRUP00000135590
Gallus gallus (Gga) gga22528 ENSGALP00000010001
(GTF2B)
Homo sapiens (Hsa) hsa1463 ENSP00000260511
Kluyveromyces lactis (Kla) kla2670 KLLA0D13640g
Mus musculus (Mmu) mmu17650 ENSMUSP00000029938
(MGI:2385191)
P62915
Neurospora crassa (Ncr) ncr7095 NCU07289.2
Oryza sativa (Osa) osa31318 4407.m00137
Oryza sativa (Osa) osa48342 5664.m00150
Oryza sativa (Osa) osa56834 6396.m00181
Oryza sativa (Osa) osa60383 6568.m00152
Oryza sativa (Osa) osa66055 6884.m00148
Plasmodium falciparum (Pfa) pfa2615 PFA0525w
Rattus norvegicus (Rno) rno17117 ENSRNOP00000015033
(RGD:619735)
P62916
Saccharomyces cerevisiae (Sce) sce6542 YPR086W
(S000006290)
Schizosaccharomyces pombe (Spo) spo1552 SPAC16E8.16 O13749
Yarrowia lipolytica (Yli) yli1824 YALI0C02563g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC16E8.16
IDA
AthAt3g10330
MmuMGI:2385191
SpoSPAC16E8.16
NAS
DmeFBgn0004915
GO:0005654 nucleoplasm C
IPI
SceS000006290
GO:0005667 transcription factor complex C
ISS
DmeFBgn0004915
GO:0005737 cytoplasm C
IDA
AthAt3g10330
GO:0003677 DNA binding F
IDA
MmuMGI:2385191
GO:0003702 RNA polymerase II transcription factor
activity
F
ISS
AthAt3g10330
At3g29380
At2g41630
PfaPFA0525w
GO:0005515 protein binding F
IPI
MmuMGI:2385191
GO:0008134 transcription factor binding F
IPI
DmeFBgn0004915
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000006290
IPI
SceS000006290
ISS
DmeFBgn0004915
SceS000006290
GO:0030528 transcription regulator activity F
IDA
SpoSPAC16E8.16
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
NAS
DmeFBgn0004915
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
IDA
SceS000006290
SpoSPAC16E8.16
IPI
SceS000006290
ISS
DmeFBgn0004915
PfaPFA0525w
SceS000006290
GO:0008150 biological_process P
ND
MmuMGI:2385191
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006648
GO:0045449 regulation of transcription P
IDA
SpoSPAC16E8.16
GO:0046686 response to cadmium ion P
IEP
AthAt3g29380
GO:0051101 regulation of DNA binding P
IDA
DmeFBgn0004915

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC16E8.16
(O13749)
YPR086W
(S000006290)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPAC16E8.16
IDA
SpoSPAC16E8.16
GO:0005654 nucleoplasm C
IPI
SceS000006290
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000006290
IPI
SceS000006290
ISS
SceS000006290
GO:0030528 transcription regulator activity F
IDA
SpoSPAC16E8.16
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
IDA
SceS000006290
SpoSPAC16E8.16
IPI
SceS000006290
ISS
SceS000006290
GO:0045449 regulation of transcription P
IDA
SpoSPAC16E8.16

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

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